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L2_021_000G1_scaffold_469

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_469_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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282..1715
DNA (1434bp) protein (478aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037A18C1
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ABC transporter
L2_021_000G1_scaffold_469_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1739..2461
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036E7203
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
ABC-type polysaccharide/polyol phosphate transport system, ATPase component {ECO:0000313|EMBL:CBK92936.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_021_000G1_scaffold_469_3
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2482..4425
DNA (1944bp) protein (648aa)
Lipopolysaccharide biosynthesis proteins LPS:glycosyltransferases n=1 Tax=Clostridium sp. CAG:43 RepID=R7ADN0_9CLOT
Lipopolysaccharide biosynthesis proteins LPS:glycosyltransferases {ECO:0000313|EMBL:CDD58918.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases
L2_021_000G1_scaffold_469_4
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4549..6423
DNA (1875bp) protein (625aa)
Lipopolysaccharide biosynthesis proteins LPS:glycosyltransferases n=1 Tax=Clostridium sp. CAG:43 RepID=R7ADN0_9CLOT
Lipopolysaccharide biosynthesis proteins LPS:glycosyltransferases {ECO:0000313|EMBL:CDD58918.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
family 8 glycosyl transferase
L2_021_000G1_scaffold_469_5
Cetobacterium somerae, Cetobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

6544..7701
DNA (1158bp) protein (386aa)
UDP-galactopyranose mutase (EC:5.4.99.9)
UDP-galactopyranose mutase n=1 Tax=Cetobacterium somerae ATCC BAA-474 RepID=U7V8L9_9FUSO
UDP-galactopyranose mutase {ECO:0000313|EMBL:ERT67846.1}; TaxID=1319815 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Cetobacterium.;" source="Cetobacterium somerae ATCC BAA-474.;"
L2_021_000G1_scaffold_469_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8117..9184
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSK5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30420.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
IS1470, transposase
L2_021_000G1_scaffold_469_7
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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9310..11391
DNA (2082bp) protein (694aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI00030796E4
Uncharacterized protein {ECO:0000313|EMBL:KEF29267.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
Hypothetical protein
L2_021_000G1_scaffold_469_8
Firmicutes bacterium CAG:884, Firmicutes, Bacteria

Not on your lists

11509..12438
DNA (930bp) protein (310aa)
csbB; putative glycosyltransferase CsbB (EC:2.4.-.-)
Glycosyltransferase group 2 family protein n=1 Tax=Firmicutes bacterium CAG:884 RepID=R5MT48_9FIRM
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CCY94618.1}; TaxID=1262990 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:884.;"
L2_021_000G1_scaffold_469_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12471..13508
DNA (1038bp) protein (346aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EEP55847.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EEP55847.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
galE1; UDP-glucose 4-epimerase GalE (EC:5.1.3.2)
UDP-glucose 4-epimerase n=2 Tax=Clostridium butyricum RepID=B1QTA9_CLOBU
L2_021_000G1_scaffold_469_10
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13540..13941
DNA (402bp) protein (134aa)
polysaccharide synthesis protein GtrA n=1 Tax=Clostridium beijerinckii RepID=UPI00030AF185
GtrA family protein {ECO:0000313|EMBL:AJG99564.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
gtrA-like family protein
L2_021_000G1_scaffold_469_11
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14171..14353
DNA (183bp) protein (61aa)
UPI0003D65238 related cluster n=1 Tax=unknown RepID=UPI0003D65238
Transposase 10 {ECO:0000313|EMBL:ETI96951.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
L2_021_000G1_scaffold_469_12
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14542..16083
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0GBD2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EOA06804.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;"
hypothetical protein
L2_021_000G1_scaffold_469_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16126..17001
DNA (876bp) protein (292aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
galU; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP-glucose-1-phosphate uridylyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KHQ6_CLOBU
L2_021_000G1_scaffold_469_14
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17204..18682
DNA (1479bp) protein (493aa)
Putative membrane protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LGC0_ACEWD
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AFA47056.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
L2_021_000G1_scaffold_469_15
unknown

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comp(18989..19090)
DNA (102bp) protein (34aa)
Toxin-antitoxin system, toxin component, Txe/YoeB family n=1 Tax=Coprococcus catus GD/7 RepID=D4J7L4_9FIRM
toxin-antitoxin system, toxin component, Txe/YoeB family
L2_021_000G1_scaffold_469_16
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19083..19349)
DNA (267bp) protein (89aa)
Prevent-host-death family protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y9S5_9FIRM
Prevent-host-death family protein {ECO:0000313|EMBL:ESL04426.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
Antitoxin of toxin-antitoxin stability system
L2_021_000G1_scaffold_469_17
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20200..20631
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7MCT1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGN02638.1}; TaxID=1444290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4570.;"
Nucleotidyltransferase domain protein
L2_021_000G1_scaffold_469_18
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20680..20976
DNA (297bp) protein (99aa)
Nucleotidyltransferase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MZS6_CLOSA
nucleotidyltransferase
Nucleotidyltransferase {ECO:0000313|EMBL:AGX45181.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_000G1_scaffold_469_19
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20963..21358
DNA (396bp) protein (132aa)
Nucleotidyltransferase substrate-binding family protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MX56_CLOSA
nucleotidyltransferase substrate-binding family protein
Nucleotidyltransferase substrate-binding family protein {ECO:0000313|EMBL:AGX45180.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_000G1_scaffold_469_20
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21390..21746)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7MD11_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI98741.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein DUF1659
L2_021_000G1_scaffold_469_21
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21886..22614
DNA (729bp) protein (243aa)
Transcriptional regulator, RpiR family n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5N000_CLOSA
transcriptional regulator, RpiR family
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:AGX45097.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_000G1_scaffold_469_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22799..24220
DNA (1422bp) protein (474aa)
Glycosidases (EC:2.4.1.7)
Glycosidases {ECO:0000313|EMBL:CBL13462.1}; EC=2.4.1.7 {ECO:0000313|EMBL:CBL13462.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Glycosidases n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1H2_9FIRM
L2_021_000G1_scaffold_469_23
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24243..25556
DNA (1314bp) protein (438aa)
Lichenan permease iic component n=2 Tax=Clostridium butyricum RepID=B1QTF3_CLOBU
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
PTS system lactose/cellobiose family IIC subunit
L2_021_000G1_scaffold_469_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25543..26955
DNA (1413bp) protein (471aa)
6-phospho-beta-glucosidase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FRP3_CLOPA
6-phospho-beta-glucosidase {ECO:0000313|EMBL:KJU71588.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
glycoside hydrolase family protein
L2_021_000G1_scaffold_469_25

Not on your lists

27162..27527
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8K9R0_CLOBU
Nucleotidyltransferase family protein {ECO:0000313|EMBL:ETJ16585.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_021_000G1_scaffold_469_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27538..28008
DNA (471bp) protein (157aa)
Uncharacterized protein {ECO:0000313|EMBL:KHD15499.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L2_021_000G1_scaffold_469_27
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28077..28295)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M226_9CLOT
hypothetical protein DUF2922
Uncharacterized protein {ECO:0000313|EMBL:AGF59665.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_021_000G1_scaffold_469_28
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28413..28637)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MVP2_9CLOT
hypothetical protein DUF1659
Uncharacterized protein {ECO:0000313|EMBL:AGF55582.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_021_000G1_scaffold_469_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28695..28874)
DNA (180bp) protein (60aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TKK3_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD23450.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_021_000G1_scaffold_469_30
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28994..29566)
DNA (573bp) protein (191aa)
RNA polymerase sigma 70 n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G100_CLOPA
RNA polymerase sigma 70 {ECO:0000313|EMBL:ETD69781.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
sigma-70 region 2 domain-containing protein
Displaying items 1-30 of 51 in total

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