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L2_021_000G1_scaffold_480

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_480_1
unknown

Not on your lists

318..440
DNA (123bp) protein (41aa)

This feature has no annotations

L2_021_000G1_scaffold_480_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

447..1226
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76802.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_021_000G1_scaffold_480_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1378..2442
DNA (1065bp) protein (355aa)
ABC transporter, ATP-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMI2_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFB75767.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ABC-type multidrug transport system, ATPase component
L2_021_000G1_scaffold_480_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2426..3289
DNA (864bp) protein (288aa)
ABC-2 type transporter n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMI1_9FIRM
ABC-2 type transporter {ECO:0000313|EMBL:EFB75766.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_021_000G1_scaffold_480_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3303..4727
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75765.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ABC-type uncharacterized transport system.
L2_021_000G1_scaffold_480_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4737..5747
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75764.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_021_000G1_scaffold_480_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6054..7229
DNA (1176bp) protein (392aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMH8_9FIRM
family 3 glycosyl hydrolase
L2_021_000G1_scaffold_480_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7283..8335
DNA (1053bp) protein (351aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EFB75762.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB75762.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMH7_9FIRM
group 1 glycosyl transferase
L2_021_000G1_scaffold_480_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8379..9905)
DNA (1527bp) protein (509aa)
Mg chelatase-like protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMH6_9FIRM
Mg chelatase-like protein {ECO:0000313|EMBL:EFB75761.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Mg chelatase-related protein
L2_021_000G1_scaffold_480_10
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9918..10727)
DNA (810bp) protein (270aa)
VanW family protein n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7H568_9FIRM
VanW family protein {ECO:0000313|EMBL:CDE34138.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
van Willebrand factor A
L2_021_000G1_scaffold_480_11
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10737..11264)
DNA (528bp) protein (176aa)
HAD phosphatase family IIIA n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7H4A7_9FIRM
HAD phosphatase family IIIA {ECO:0000313|EMBL:CDE34136.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
van Willebrand factor A
L2_021_000G1_scaffold_480_12
Slackia piriformis, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11257..11934)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Slackia piriformis YIT 12062 RepID=K0Z6V5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EJZ83130.1}; TaxID=742818 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia piriformis YIT 12062.;"
methylglyoxal synthase
L2_021_000G1_scaffold_480_13
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12152..13834
DNA (1683bp) protein (561aa)
Phosphomannomutase (EC:5.4.2.8)
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMH5_9FIRM
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II {ECO:0000313|EMBL:EFB75760.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_021_000G1_scaffold_480_14
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14291..16297
DNA (2007bp) protein (669aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CEX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF38416.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
antirepressor regulating drug resistance protein
L2_021_000G1_scaffold_480_15
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16312..16695
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67186.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
putative transcriptional regulator
L2_021_000G1_scaffold_480_16
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16806..17672
DNA (867bp) protein (289aa)
PHP domain protein {ECO:0000313|EMBL:EFB76772.1}; EC=3.1.3.- {ECO:0000313|EMBL:EFB76772.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
PHP domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLB4_9FIRM
Predicted metal-dependent phosphoesterases (PHP family)
L2_021_000G1_scaffold_480_17
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17686..17943
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76771.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_021_000G1_scaffold_480_18
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18072..19850
DNA (1779bp) protein (593aa)
FkbH domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLB2_9FIRM
FkbH domain protein {ECO:0000313|EMBL:EFB76770.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Predicted enzyme involved in methoxymalonyl-ACP biosynthesis
L2_021_000G1_scaffold_480_19
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19866..20978
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76769.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_021_000G1_scaffold_480_20
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20994..22358
DNA (1365bp) protein (455aa)
MBOAT family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLB0_9FIRM
MBOAT family protein {ECO:0000313|EMBL:EFB76768.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
alginate O-acetyltransferase
L2_021_000G1_scaffold_480_21
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22513..23472)
DNA (960bp) protein (320aa)
DNA replication protein DnaC n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLL9_9FIRM
DNA replication protein DnaC {ECO:0000313|EMBL:EFB76317.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
DNA replication protein
L2_021_000G1_scaffold_480_22
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23476..24381)
DNA (906bp) protein (302aa)
DnaD domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLL8_9FIRM
DnaD domain protein {ECO:0000313|EMBL:EFB76316.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Replication initiation and membrane attachment protein (DnaB).
L2_021_000G1_scaffold_480_23
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24566..25204
DNA (639bp) protein (213aa)
Phosphoribosyl transferase domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLL7_9FIRM
Phosphoribosyl transferase domain protein {ECO:0000313|EMBL:EFB76315.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_021_000G1_scaffold_480_24
[Eubacterium] cellulosolvens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25320..26417
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Eubacterium cellulosolvens 6 RepID=I5AU76_EUBCE
Uncharacterized protein {ECO:0000313|EMBL:EIM57349.1}; TaxID=633697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] cellulosolvens 6.;"
L2_021_000G1_scaffold_480_25
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26778..27326
DNA (549bp) protein (183aa)
RNA methyltransferase, RsmD family {ECO:0000313|EMBL:EFB75838.1}; EC=2.1.1.- {ECO:0000313|EMBL:EFB75838.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
RNA methyltransferase, RsmD family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMQ3_9FIRM
RNA methyltransferase, RsmD family
L2_021_000G1_scaffold_480_26
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27323..27796
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75837.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_021_000G1_scaffold_480_27
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28209..28625
DNA (417bp) protein (139aa)
Protein MraZ n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMQ0_9FIRM
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
mraZ protein
L2_021_000G1_scaffold_480_28
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28645..29568
DNA (924bp) protein (308aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMP9_9FIRM
L2_021_000G1_scaffold_480_29
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29581..30060
DNA (480bp) protein (160aa)
Cell division protein FtsL n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMP8_9FIRM
Cell division protein FtsL {ECO:0000313|EMBL:EFB75833.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_021_000G1_scaffold_480_30
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30150..32723
DNA (2574bp) protein (858aa)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMP7_9FIRM
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EFB75832.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Cell division protein FtsI/penicillin-binding protein 2
Displaying items 1-30 of 38 in total

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