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L2_021_000G1_scaffold_553

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_553_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(241..852)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEC4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETI91968.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L2_021_000G1_scaffold_553_2
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

945..2192
DNA (1248bp) protein (416aa)
NAD n=4 Tax=Clostridium butyricum RepID=B1QU72_CLOBU
Alkylphosphonate utilization operon protein PhnA {ECO:0000313|EMBL:KJZ85048.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
HI0933 family protein
L2_021_000G1_scaffold_553_3
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2516..3265)
DNA (750bp) protein (250aa)
Acyl-ACP thioesterase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5N123_CLOSA
acyl-ACP thioesterase
Acyl-ACP thioesterase {ECO:0000313|EMBL:AGX45447.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_000G1_scaffold_553_4
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3529..3711)
DNA (183bp) protein (61aa)
Hybrid cluster protein-associated redox disulfide domain protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MY33_CLOSA
hybrid cluster protein-associated redox disulfide domain protein
Hybrid cluster protein-associated redox disulfide domain protein {ECO:0000313|EMBL:AGX45448.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_000G1_scaffold_553_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3810..5096)
DNA (1287bp) protein (429aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
purA; adenylosuccinate synthetase PurA (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YRT1_CLOBU
L2_021_000G1_scaffold_553_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5442..6617
DNA (1176bp) protein (392aa)
NAD-dependent malic enzyme n=2 Tax=Clostridium butyricum RepID=B1QSQ8_CLOBU
Malate dehydrogenase {ECO:0000313|EMBL:KHD13919.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
malate dehydrogenase
L2_021_000G1_scaffold_553_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6835..7641)
DNA (807bp) protein (269aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
proC; pyrroline-5-carboxylate reductase ProC (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=4 Tax=Clostridium butyricum RepID=B1QSQ5_CLOBU
L2_021_000G1_scaffold_553_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7787..8137
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1F2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KHD13917.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L2_021_000G1_scaffold_553_9
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8251..9573)
DNA (1323bp) protein (441aa)
dnaC; replicative DNA helicase DnaC (EC:3.6.4.12)
Replicative DNA helicase DnaC {ECO:0000313|EMBL:AGX45451.1}; EC=3.6.4.12 {ECO:0000313|EMBL:AGX45451.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Replicative DNA helicase DnaC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5N0L6_CLOSA
L2_021_000G1_scaffold_553_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9660..11555)
DNA (1896bp) protein (632aa)
lon4; Lon protease 2 (EC:3.4.21.53)
ATP-dependent protease, Lon family n=3 Tax=Clostridium butyricum RepID=B1QSQ3_CLOBU
Lon family ATP-dependent protease {ECO:0000313|EMBL:ENZ30301.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_021_000G1_scaffold_553_11
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11568..12014)
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U711_9CLOT
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
rplI; 50S ribosomal protein L9
L2_021_000G1_scaffold_553_12
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12017..13954)
DNA (1938bp) protein (646aa)
Putative phosphoesterase n=1 Tax=Clostridium sp. DL-VIII RepID=G7MBI9_9CLOT
yybT; protein YybT
Protein YybT {ECO:0000313|EMBL:AGX45454.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_000G1_scaffold_553_13
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13981..14301)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TCV2_9CLOT
MazG-like family
Uncharacterized protein {ECO:0000313|EMBL:EKQ57763.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_021_000G1_scaffold_553_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14457..14714)
DNA (258bp) protein (86aa)
30S ribosomal protein S18 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5N0M0_CLOSA
rpsR; 30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_021_000G1_scaffold_553_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14740..15192)
DNA (453bp) protein (151aa)
Single-stranded DNA-binding protein n=4 Tax=Clostridium butyricum RepID=B1QSP8_CLOBU
single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L2_021_000G1_scaffold_553_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15207..15497)
DNA (291bp) protein (97aa)
30S ribosomal protein S6 n=4 Tax=Clostridium butyricum RepID=B1QSP7_CLOBU
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
rpsF; 30S ribosomal protein S6
L2_021_000G1_scaffold_553_17
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15596..15790)
DNA (195bp) protein (65aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A6M3L3_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR37193.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_021_000G1_scaffold_553_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15815..16696)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1E5_CLOBU
Mechanosensitive ion channel protein {ECO:0000313|EMBL:KHD13908.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
mechanosensitive ion channel family protein
L2_021_000G1_scaffold_553_19
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16713..16952)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5N0M4_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX45461.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_000G1_scaffold_553_20
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17317..18477
DNA (1161bp) protein (387aa)
Cysteine desulfurase family protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M3L7_CLOB8
cysteine desulfurase family protein
Cysteine desulfurase family protein {ECO:0000313|EMBL:ABR37197.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_021_000G1_scaffold_553_21
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18529..19107
DNA (579bp) protein (193aa)
Putative sporulation protein YyaC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MXG5_CLOSA
yyaC3; putative sporulation protein YyaC
Putative sporulation protein YyaC {ECO:0000313|EMBL:AGX45464.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_000G1_scaffold_553_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19195..19710)
DNA (516bp) protein (172aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QSP0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30287.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_021_000G1_scaffold_553_23
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19698..20600)
DNA (903bp) protein (301aa)
Stage 0 sporulation protein J n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5N0M7_CLOSA
spo0J; stage 0 sporulation protein J
Stage 0 sporulation protein J {ECO:0000313|EMBL:AGX45466.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_000G1_scaffold_553_24
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20614..21375)
DNA (762bp) protein (254aa)
ATPase involved in chromosome partitioning n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TY20_9CLOT
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:EKQ57775.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
cobyrinic acid a,c-diamide synthase
L2_021_000G1_scaffold_553_25
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21516..22298)
DNA (783bp) protein (261aa)
ParB-like partition protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N870_9CLOT
ParB-like partition protein
ParB-like partition protein {ECO:0000313|EMBL:AGF59552.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_021_000G1_scaffold_553_26
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22403..23122)
DNA (720bp) protein (240aa)
rsmG; ribosomal RNA small subunit methyltransferase G (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MXH0_CLOSA
L2_021_000G1_scaffold_553_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23144..25030)
DNA (1887bp) protein (629aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=3 Tax=Clostridium butyricum RepID=B1QSN5_CLOBU
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
L2_021_000G1_scaffold_553_28
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25043..26425)
DNA (1383bp) protein (461aa)
mnmE; tRNA modification GTPase MnmE (EC:3.6.-.-)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
tRNA modification GTPase MnmE n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5N0N0_CLOSA
L2_021_000G1_scaffold_553_29
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26574..27197)
DNA (624bp) protein (208aa)
Putative RNA-binding protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TY23_9CLOT
jag; protein Jag
Putative RNA-binding protein {ECO:0000313|EMBL:EKQ57780.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_021_000G1_scaffold_553_30
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27237..28013)
DNA (777bp) protein (259aa)
Membrane protein insertase, YidC/Oxa1 family n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U721_9CLOT
Membrane protein insertase, YidC/Oxa1 family {ECO:0000313|EMBL:EKQ57781.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
membrane protein insertase, YidC/Oxa1 family
Displaying items 1-30 of 40 in total

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