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L2_021_000G1_scaffold_590

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_590_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..823
DNA (822bp) protein (274aa)
Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=root RepID=D4K048_9FIRM
electron transport complex, RnfABCDGE type, C subunit
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_590_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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823..1776
DNA (954bp) protein (318aa)
Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K047_9FIRM
electron transport complex, RnfABCDGE type, D subunit
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_590_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1773..2321
DNA (549bp) protein (183aa)
Predicted NADH:ubiquinone oxidoreductase, subunit RnfG n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K046_9FIRM
Predicted NADH:ubiquinone oxidoreductase, subunit RnfG
Predicted NADH:ubiquinone oxidoreductase, subunit RnfG {ECO:0000313|EMBL:CBK99645.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_590_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2338..3000
DNA (663bp) protein (221aa)
Electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K045_9FIRM
electron transport complex, RnfABCDGE type, E subunit
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_590_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3005..3637
DNA (633bp) protein (211aa)
Electron transport complex, RnfABCDGE type, A subunit n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K044_9FIRM
electron transport complex, RnfABCDGE type, A subunit
Electron transport complex, RnfABCDGE type, A subunit {ECO:0000313|EMBL:CBK99643.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_590_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3653..4549
DNA (897bp) protein (299aa)
Predicted NADH:ubiquinone oxidoreductase, subunit RnfB n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K043_9FIRM
Predicted NADH:ubiquinone oxidoreductase, subunit RnfB
Predicted NADH:ubiquinone oxidoreductase, subunit RnfB {ECO:0000313|EMBL:CBK99642.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_590_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5012..6142
DNA (1131bp) protein (377aa)
Major Facilitator Superfamily n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K042_9FIRM
Major Facilitator Superfamily.
Major Facilitator Superfamily {ECO:0000313|EMBL:CBK99641.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_590_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6360..6992)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZKI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ06314.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_021_000G1_scaffold_590_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7399..7602
DNA (204bp) protein (68aa)
UPF0291 protein FP2_23020 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K041_9FIRM
hypothetical protein
UPF0291 protein FP2_23020 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_590_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7798..9093
DNA (1296bp) protein (432aa)
Adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000313|EMBL:CBK99639.1};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Adenylosuccinate synthetase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K040_9FIRM
L2_021_000G1_scaffold_590_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9127..10026
DNA (900bp) protein (300aa)
EDD domain protein, DegV family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K039_9FIRM
EDD domain protein, DegV family
EDD domain protein, DegV family {ECO:0000313|EMBL:CBK99638.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_590_12
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10087..11403)
DNA (1317bp) protein (439aa)
CBS domain pair n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QJ32_9FIRM
CBS domain pair {ECO:0000313|EMBL:CDC30901.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Hemolysins and related proteins containing CBS domains
L2_021_000G1_scaffold_590_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11581..14193)
DNA (2613bp) protein (871aa)
ATP-dependent chaperone ClpB n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K038_9FIRM
ATP-dependent chaperone ClpB
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_590_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14449..15381)
DNA (933bp) protein (311aa)
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985, ECO:0000313|EMBL:CBK99636.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Cysteine synthase A n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K037_9FIRM
L2_021_000G1_scaffold_590_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15657..16088
DNA (432bp) protein (144aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K036_9FIRM
transcriptional regulator, BadM/Rrf2 family
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:CBK99635.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_590_16
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16147..17286)
DNA (1140bp) protein (380aa)
Trigger factor n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q429_9FIRM
Trigger factor {ECO:0000256|RuleBase:RU003914}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
trigger factor
L2_021_000G1_scaffold_590_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17655..18827
DNA (1173bp) protein (391aa)
Malic enzyme (EC:1.1.1.38)
Malic enzyme {ECO:0000313|EMBL:CBK99634.1}; EC=1.1.1.38 {ECO:0000313|EMBL:CBK99634.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Malic enzyme n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K035_9FIRM
L2_021_000G1_scaffold_590_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18843..19682
DNA (840bp) protein (280aa)
fumarase alpha subunit (EC:4.2.1.2)
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAW0_9FIRM
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type {ECO:0000313|EMBL:EEU94943.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L2_021_000G1_scaffold_590_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19833..20390
DNA (558bp) protein (186aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region (EC:4.2.1.2)
Hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region {ECO:0000313|EMBL:CBK99631.1}; EC=4.2.1.2 {ECO:0000313|EMBL:CBK99631.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K032_9FIRM
L2_021_000G1_scaffold_590_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20540..20935
DNA (396bp) protein (132aa)
Mn-dependent transcriptional regulator n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K031_9FIRM
Mn-dependent transcriptional regulator
Mn-dependent transcriptional regulator {ECO:0000313|EMBL:CBK99630.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_021_000G1_scaffold_590_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20999..21349)
DNA (351bp) protein (117aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
mRNA interferase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K030_9FIRM
Growth inhibitor
L2_021_000G1_scaffold_590_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21484..21933)
DNA (450bp) protein (150aa)
phosphopantethiene--protein transferase domain (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071085}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071082};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Holo-[acyl-carrier-protein] synthase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K029_9FIRM
L2_021_000G1_scaffold_590_23
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22034..22288
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30483.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L2_021_000G1_scaffold_590_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22373..23314)
DNA (942bp) protein (314aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621, ECO:0000313|EMBL:CBK99627.1}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
tRNA-dihydrouridine synthase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K028_9FIRM
tRNA-dihydrouridine synthase
L2_021_000G1_scaffold_590_25
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23466..23948)
DNA (483bp) protein (161aa)
Acetyltransferases (EC:2.3.1.57)
Acetyltransferases {ECO:0000313|EMBL:CBK91189.1}; EC=2.3.1.57 {ECO:0000313|EMBL:CBK91189.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Acetyltransferases n=2 Tax=Clostridiales RepID=D6E018_9FIRM
L2_021_000G1_scaffold_590_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24661..25173
DNA (513bp) protein (171aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJW9_9FIRM
L2_021_000G1_scaffold_590_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25311..25922
DNA (612bp) protein (204aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K017_9FIRM
Holliday junction DNA helicase subunit RuvA
L2_021_000G1_scaffold_590_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25926..26981
DNA (1056bp) protein (352aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K016_9FIRM
Holliday junction DNA helicase, RuvB subunit
L2_021_000G1_scaffold_590_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26996..28351
DNA (1356bp) protein (452aa)
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Phosphoglucosamine mutase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K015_9FIRM
L2_021_000G1_scaffold_590_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28386..29261
DNA (876bp) protein (292aa)
Predicted SAM-dependent methyltransferases (EC:2.1.1.64 2.1.1.-)
Predicted SAM-dependent methyltransferases {ECO:0000313|EMBL:CBK99613.1}; EC=2.1.1.- {ECO:0000313|EMBL:CBK99613.1};; EC=2.1.1.64 {ECO:0000313|EMBL:CBK99613.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Predicted SAM-dependent methyltransferases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K014_9FIRM
Displaying items 1-30 of 37 in total

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