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L2_021_000G1_scaffold_645

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Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_645_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..723)
DNA (723bp) protein (241aa)
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase n=1 Tax=Escherichia coli HVH 139 (4-3192644) RepID=T7CHP3_ECOLX
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000313|EMBL:EFK00107.1}; TaxID=749545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 182-1.;"
ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase
L2_021_000G1_scaffold_645_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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869..2293
DNA (1425bp) protein (475aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C2.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=950 Tax=Enterobacteriaceae RepID=MIAB_ECO24
tRNA-i(6)A37 thiotransferase enzyme MiaB
L2_021_000G1_scaffold_645_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2407..3486
DNA (1080bp) protein (360aa)
PhoH-like protein n=674 Tax=Enterobacteriaceae RepID=C3TJ62_ECOLX
PhoH family protein
PhoH-like protein {ECO:0000313|EMBL:ELJ75657.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L2_021_000G1_scaffold_645_4
Escherichia sp. KTE31, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3483..3950
DNA (468bp) protein (156aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1169349 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE31.;"
Endoribonuclease YbeY n=716 Tax=Enterobacteriaceae RepID=YBEY_ECO24
hypothetical protein
L2_021_000G1_scaffold_645_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4040..4918
DNA (879bp) protein (293aa)
Magnesium and cobalt efflux protein CorC n=1409 Tax=Enterobacteriaceae RepID=CORC_ECO57
ybeX; magnesium/cobalt efflux protein CorC
Magnesium and cobalt efflux protein CorC {ECO:0000313|EMBL:EQQ15519.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 87 (4-5977630).;"
L2_021_000G1_scaffold_645_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4943..6427
DNA (1485bp) protein (495aa)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148, ECO:0000256|SAAS:SAAS00250216}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01148, ECO:0000256|SAAS:SAAS00088950};; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
Apolipoprotein N-acyltransferase n=110 Tax=Escherichia coli RepID=J7R1Z2_ECOLX
lnt; apolipoprotein N-acyltransferase
L2_021_000G1_scaffold_645_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6385..8262)
DNA (1878bp) protein (626aa)
Peptidase, S54 family n=14 Tax=Escherichia coli RepID=D8EP05_ECOLX
Outer membrane protein {ECO:0000313|EMBL:EGU97513.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
hypothetical protein
L2_021_000G1_scaffold_645_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8728..9453
DNA (726bp) protein (242aa)
Glutamate/aspartate periplasmic binding protein n=1 Tax=Escherichia coli N1 RepID=K3KZ13_ECOLX
ybeJ; Glutamate Aspartate periplasmic binding protein precursor GltI
Putative periplasmic binding transport protein {ECO:0000313|EMBL:AAG54989.1}; TaxID=83334 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:H7.;"
L2_021_000G1_scaffold_645_9
Shigella sonnei, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9623..10363
DNA (741bp) protein (247aa)
Glutamate/aspartate ABC transporter, permease protein GltJ n=341 Tax=Enterobacteriaceae RepID=B1LLA4_ECOSM
polar amino acid ABC transporter inner membrane subunit
Amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein {ECO:0000313|EMBL:EJL19528.1}; TaxID=754077 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella sonnei str. Moseley.;"
L2_021_000G1_scaffold_645_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10388..10765
DNA (378bp) protein (126aa)
Glutamate/aspartate transport system permease protein GltK n=1 Tax=Escherichia coli 5.0959 RepID=I2VXU7_ECOLX
Amino acid ABC transporter permease {ECO:0000313|EMBL:EYV11629.1}; TaxID=1446560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O121:H19 str. 2010C-3609.;"
gltK; glutamate/aspartate transport system permease GltK
L2_021_000G1_scaffold_645_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10765..11319
DNA (555bp) protein (185aa)
ATP-binding protein of glutamate-aspartate transport system n=1 Tax=Escherichia coli O157:H7 str. LSU-61 RepID=E8JBN3_ECO57
glutamate/aspartate transport ATP-binding protein gltL
Glutamate/aspartate transport ATP-binding protein GltL {ECO:0000313|EMBL:ELC11742.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
L2_021_000G1_scaffold_645_12
Shigella sonnei, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11437..12372
DNA (936bp) protein (312aa)
ribosylpyrimidine nucleosidase (EC:3.2.2.8)
Pyrimidine-specific ribonucleoside hydrolase RihA {ECO:0000256|HAMAP-Rule:MF_01431, ECO:0000256|SAAS:SAAS00014539}; EC=3.2.-.- {ECO:0000256|HAMAP-Rule:MF_01431, ECO:0000256|SAAS:SAAS00015510};; Cytidine/uridine-specific hydrolase {ECO:0000256|HAMAP-Rule:MF_01431}; TaxID=754077 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella sonnei str. Moseley.;"
Pyrimidine-specific ribonucleoside hydrolase RihA n=107 Tax=Enterobacteriaceae RepID=RIHA_ECO8A
L2_021_000G1_scaffold_645_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12456..14126
DNA (1671bp) protein (557aa)
Hsp70 family protein n=9 Tax=Escherichia coli RepID=G1ZFT5_ECOLX
Chaperone protein HscC {ECO:0000313|EMBL:EIH26193.1}; TaxID=869675 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2264.;"
hscC; molecular chaperone DnaK
L2_021_000G1_scaffold_645_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14186..15334)
DNA (1149bp) protein (383aa)
Hsc56 co-chaperone of HscC n=65 Tax=Escherichia coli RepID=B7L9J3_ECO55
djlC; Hsc56 co-chaperone of HscC
DnaJ domain protein {ECO:0000313|EMBL:KEL84638.1}; TaxID=1444157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S3_C2.;"
L2_021_000G1_scaffold_645_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15331..16038)
DNA (708bp) protein (236aa)
Uncharacterized protein n=154 Tax=Escherichia coli RepID=A7ZJ39_ECO24
hypothetical protein
PF06889 family protein {ECO:0000313|EMBL:EII20278.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
L2_021_000G1_scaffold_645_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16140..16694
DNA (555bp) protein (185aa)
Uncharacterized protein n=48 Tax=Escherichia coli RepID=J7QNB0_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDV61292.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
L2_021_000G1_scaffold_645_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16704..18131)
DNA (1428bp) protein (476aa)
DnaJ domain protein n=29 Tax=Escherichia coli RepID=E7J3W0_ECOLX
DnaJ domain protein {ECO:0000313|EMBL:EIH25947.1}; TaxID=869675 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2264.;"
djlB; putative DnaJ-class chaperone
L2_021_000G1_scaffold_645_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18128..18835)
DNA (708bp) protein (236aa)
PF06889 family protein n=6 Tax=Escherichia coli RepID=I2SYL3_ECOLX
PF06889 family protein {ECO:0000313|EMBL:EIH25884.1}; TaxID=869675 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2264.;"
ybeR; hypothetical protein
L2_021_000G1_scaffold_645_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18999..19328
DNA (330bp) protein (110aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=J7QYG9_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCJ43110.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_021_000G1_scaffold_645_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19325..19717
DNA (393bp) protein (131aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=J7QYG9_ECOLX
ybeQ; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH10362.1}; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666; / NRRL B-766 / W).;"
L2_021_000G1_scaffold_645_21
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19787..20269)
DNA (483bp) protein (161aa)
Uncharacterized protein YbeL n=1361 Tax=Enterobacteriaceae RepID=YBEL_ECO57
ybeL; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJZ68109.1}; TaxID=766155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1485-80.;"
L2_021_000G1_scaffold_645_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20504..20695
DNA (192bp) protein (64aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1268989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907889.;"
Leucine--tRNA ligase n=1 Tax=Salmonella enterica subsp. enterica serovar Stanley str. ATCC 7308 RepID=V1M3M6_SALET
leucyl tRNA synthetase suspected. See adjacent gene [L2_021_000G1_scaffold_645_23].
L2_021_000G1_scaffold_645_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


20916..22844
DNA (1929bp) protein (643aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
Leucine--tRNA ligase n=1 Tax=Escherichia coli E128010 RepID=E7I1H2_ECOLX
L2_021_000G1_scaffold_645_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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22859..23440
DNA (582bp) protein (194aa)
LPS-assembly lipoprotein LptE n=1004 Tax=Enterobacteriaceae RepID=LPTE_ECO24
rlpB; LPS-assembly lipoprotein
LPS-assembly lipoprotein LptE {ECO:0000256|HAMAP-Rule:MF_01186, ECO:0000256|SAAS:SAAS00074334}; Flags: Precursor;; TaxID=1116113 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE007_MS-11.;"
L2_021_000G1_scaffold_645_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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23440..24471
DNA (1032bp) protein (344aa)
DNA polymerase III delta subunit n=198 Tax=Enterobacteriaceae RepID=C3TJG5_ECOLX
holA; DNA polymerase III subunit delta
DNA polymerase III, delta subunit {ECO:0000313|EMBL:AIF61528.1}; TaxID=340184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B7A.;"
L2_021_000G1_scaffold_645_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24473..25114
DNA (642bp) protein (214aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:3.5.4.4)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
Nicotinate-nucleotide adenylyltransferase n=688 Tax=Bacteria RepID=NADD_ECOLI
L2_021_000G1_scaffold_645_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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25138..25749
DNA (612bp) protein (204aa)
Alpha-ribazole phosphatase n=24 Tax=Escherichia coli RepID=D8E8S5_ECOLX
Alpha-ribazole phosphatase {ECO:0000313|EMBL:EGI47637.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
cobC; alpha-ribazole-5'-P phosphatase
L2_021_000G1_scaffold_645_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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26009..26326
DNA (318bp) protein (106aa)
Ribosomal silencing factor RsfS n=1415 Tax=Enterobacteriaceae RepID=IOJAP_ECOL6
hypothetical protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C2.;"
L2_021_000G1_scaffold_645_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26330..26797
DNA (468bp) protein (156aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=868191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12A.;"
Ribosomal RNA large subunit methyltransferase H n=78 Tax=Enterobacteriaceae RepID=C8U2Z8_ECO10
ybeA; hypothetical protein
L2_021_000G1_scaffold_645_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26828..28729
DNA (1902bp) protein (634aa)
Penicillin-binding protein 2 n=1358 Tax=Enterobacteriaceae RepID=PBP2_ECO57
mrdA; penicillin-binding protein 2
Penicillin-binding protein 2 {ECO:0000313|EMBL:EOV64979.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
Displaying items 1-30 of 66 in total

View Taxonomy