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L2_021_000G1_scaffold_672

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_672_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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168..1184
DNA (1017bp) protein (339aa)
DNA integration/recombination protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RT71_CLOPF
integrase/recombinase
Probable integrase/recombinase {ECO:0000313|EMBL:BAB80801.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_000G1_scaffold_672_2
Pyramidobacter piscolens, Pyramidobacter, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(1757..2497)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y5B3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB90446.1}; TaxID=352165 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Pyramidobacter.;" source="Pyramidobacter piscolens W5455.;"
hypothetical protein
L2_021_000G1_scaffold_672_3
unknown

Not on your lists

2639..2893
DNA (255bp) protein (85aa)

This feature has no annotations

L2_021_000G1_scaffold_672_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2913..3122
DNA (210bp) protein (70aa)
Transcriptional regulator, xre family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RJ12_CLOPF
Transcriptional regulator, xre family {ECO:0000313|EMBL:EDT26051.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
DNA-binding protein
L2_021_000G1_scaffold_672_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3265..3435
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RJ10_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT26049.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_021_000G1_scaffold_672_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3428..4036
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RJ07_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT26069.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_021_000G1_scaffold_672_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4350..4877
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RJ06_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT26043.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_021_000G1_scaffold_672_8
unknown

Not on your lists

comp(4960..5142)
DNA (183bp) protein (61aa)

This feature has no annotations

L2_021_000G1_scaffold_672_9
unknown

Not on your lists

comp(5145..5657)
DNA (513bp) protein (171aa)

This feature has no annotations

L2_021_000G1_scaffold_672_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5780..6094)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YWA1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KIN81224.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
transcriptional regulator
L2_021_000G1_scaffold_672_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6398..7156
DNA (759bp) protein (253aa)
DEHA2E13772p {ECO:0000313|EMBL:BAO04981.1}; TaxID=1407017 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum B str. Osaka05.;"
L2_021_000G1_scaffold_672_12
unknown

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7177..7461
DNA (285bp) protein (95aa)

This feature has no annotations

L2_021_000G1_scaffold_672_13
unknown

Not on your lists

7464..7622
DNA (159bp) protein (53aa)

This feature has no annotations

L2_021_000G1_scaffold_672_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7721..8041
DNA (321bp) protein (107aa)
Phage protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BPS7_CLOPF
Phage protein {ECO:0000313|EMBL:EDT16313.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L2_021_000G1_scaffold_672_15
Dehalobacter sp. CF, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8171..11641
DNA (3471bp) protein (1157aa)
Uncharacterized protein n=1 Tax=Dehalobacter sp. CF RepID=K4L1I5_9FIRM
phage-related hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV05410.1}; TaxID=1131462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. CF.;"
L2_021_000G1_scaffold_672_16
unknown

Not on your lists

11746..11913
DNA (168bp) protein (56aa)

This feature has no annotations

L2_021_000G1_scaffold_672_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11957..14125
DNA (2169bp) protein (723aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EHD6_CLOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA56069.1}; TaxID=498214 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Loch Maree / Type A3).;"
L2_021_000G1_scaffold_672_18
unknown

Not on your lists

comp(14231..14716)
DNA (486bp) protein (162aa)

This feature has no annotations

L2_021_000G1_scaffold_672_19
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15208..16218
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQL5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EWM54183.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
hypothetical protein
L2_021_000G1_scaffold_672_20
unknown

Not on your lists

16305..16607
DNA (303bp) protein (101aa)

This feature has no annotations

L2_021_000G1_scaffold_672_21
Enterococcus phage VD13, Sap6likevirus, Caudovirales, Viruses

Not on your lists

17549..18076
DNA (528bp) protein (176aa)
Putative HNH endonuclease n=1 Tax=Lactobacillus helveticus CIRM-BIA 953 RepID=U4QMP2_LACHE
HNH homing endonuclease {ECO:0000313|EMBL:AHL19660.1}; NUMOD4 motif family protein {ECO:0000313|EMBL:AHN83162.1}; TaxID=1458851 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; Sap6likevirus.;" source="Enterococcus phage VD13.;"
homing nuclease
L2_021_000G1_scaffold_672_22
unknown

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18107..18814
DNA (708bp) protein (236aa)

This feature has no annotations

L2_021_000G1_scaffold_672_23
unknown

Not on your lists

18869..19075
DNA (207bp) protein (69aa)

This feature has no annotations

L2_021_000G1_scaffold_672_24
unknown

Not on your lists

19121..19348
DNA (228bp) protein (76aa)

This feature has no annotations

L2_021_000G1_scaffold_672_25
unknown

Not on your lists

19335..19622
DNA (288bp) protein (96aa)

This feature has no annotations

L2_021_000G1_scaffold_672_26
unknown

Not on your lists

19622..19921
DNA (300bp) protein (100aa)

This feature has no annotations

L2_021_000G1_scaffold_672_27

Not on your lists

19974..20432
DNA (459bp) protein (153aa)
HNH endonuclease family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VQ83_CLOBI
HNH endonuclease domain protein {ECO:0000313|EMBL:AJA42855.1}; TaxID=1567011 species="Viruses; unclassified phages.;" source="Clostridium phage phiCT19406C.;"
hypothetical protein
L2_021_000G1_scaffold_672_28
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

20623..21114
DNA (492bp) protein (164aa)
Terminase n=1 Tax=Bacillus amyloliquefaciens EGD-AQ14 RepID=U1STR9_BACAM
Possible bacteriophage terminase small subunit {ECO:0000313|EMBL:EDK89457.1}; TaxID=393480 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium nucleatum subsp. polymorphum ATCC 10953.;"
phage terminase, small subunit, , P27 family
L2_021_000G1_scaffold_672_29
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21114..22838
DNA (1725bp) protein (575aa)
Phage Terminase family protein n=2 Tax=Clostridium difficile RepID=T3MFH2_CLODI
putative phage terminase, large subunit
Uncharacterized protein {ECO:0000313|EMBL:EOP45658.1}; TaxID=1053208 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus HuB13-1.;"
L2_021_000G1_scaffold_672_30
unknown

Not on your lists

22822..23043
DNA (222bp) protein (74aa)

This feature has no annotations

Displaying items 1-30 of 46 in total

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