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L2_021_000G1_scaffold_760

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_760_1
unknown

Not on your lists

3..95
DNA (93bp) protein (31aa)

This feature has no annotations

L2_021_000G1_scaffold_760_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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92..889
DNA (798bp) protein (266aa)
Thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase {ECO:0000313|EMBL:CBL07651.1}; EC=1.8.1.9 {ECO:0000313|EMBL:CBL07651.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Thioredoxin reductase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KL99_9FIRM
L2_021_000G1_scaffold_760_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1008..1319
DNA (312bp) protein (104aa)
Thioredoxin n=2 Tax=Roseburia RepID=C7GG15_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
thioredoxin
L2_021_000G1_scaffold_760_4
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1401..1841
DNA (441bp) protein (147aa)
Transcriptional regulator, MarR family n=2 Tax=Roseburia RepID=C7GG16_9FIRM
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDA55836.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
MarR family transcriptional regulator
L2_021_000G1_scaffold_760_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2016..3281
DNA (1266bp) protein (422aa)
His Kinase A (Phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Response regulator receiver domain n=2 Tax=Roseburia intestinalis RepID=D4KLA3_9FIRM
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Response regulator receiver domain.
His Kinase A (Phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Response regulator receiver domain {ECO:0000313|EMBL:CBL07655.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_021_000G1_scaffold_760_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3365..4660
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GG18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU99249.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Tetratricopeptide repeat./Helix-turn-helix.
L2_021_000G1_scaffold_760_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4825..6063
DNA (1239bp) protein (413aa)
Transporter, major facilitator family protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GG19_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEU99212.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Major Facilitator Superfamily.
L2_021_000G1_scaffold_760_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6087..7106)
DNA (1020bp) protein (340aa)
Transcriptional regulators (EC:5.1.1.1)
Transcriptional regulators {ECO:0000313|EMBL:CBL12981.1}; EC=5.1.1.1 {ECO:0000313|EMBL:CBL12981.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Transcriptional regulators n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L041_9FIRM
L2_021_000G1_scaffold_760_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7259..8872
DNA (1614bp) protein (538aa)
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207, ECO:0000313|EMBL:CBL07659.1}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207, ECO:0000313|EMBL:CBL07659.1};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
4-alpha-glucanotransferase n=3 Tax=Roseburia intestinalis RepID=D4KLA7_9FIRM
L2_021_000G1_scaffold_760_10
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8957..10294
DNA (1338bp) protein (446aa)
Extracellular solute binding ABC transporter n=2 Tax=Roseburia RepID=R6AXR7_9FIRM
Extracellular solute binding ABC transporter {ECO:0000313|EMBL:CDA55830.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_021_000G1_scaffold_760_11
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10380..11762
DNA (1383bp) protein (461aa)
Sugar ABC transporter permease protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B446_9FIRM
Sugar ABC transporter permease protein {ECO:0000313|EMBL:CDA55829.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L2_021_000G1_scaffold_760_12
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11762..12673
DNA (912bp) protein (304aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) n=3 Tax=Roseburia RepID=D4L039_9FIRM
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 2 CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDA55828.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_021_000G1_scaffold_760_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13024..14787
DNA (1764bp) protein (588aa)
Glycosidases (EC:3.2.1.1)
Glycosidases {ECO:0000313|EMBL:CBL07661.1}; EC=3.2.1.1 {ECO:0000313|EMBL:CBL07661.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Glycosidases n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KLA9_9FIRM
L2_021_000G1_scaffold_760_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14859..15503)
DNA (645bp) protein (215aa)
Bacterial extracellular solute-binding protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L037_9FIRM
Bacterial extracellular solute-binding protein.
Bacterial extracellular solute-binding protein {ECO:0000313|EMBL:CBL12977.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_021_000G1_scaffold_760_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15938..16234)
DNA (297bp) protein (99aa)
Transcriptional regulator n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L036_9FIRM
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBL12976.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_021_000G1_scaffold_760_16
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16487..16852
DNA (366bp) protein (122aa)
Putative phage infection protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AV84_9FIRM
Putative phage infection protein {ECO:0000313|EMBL:CDA55823.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
antibiotic export protein
L2_021_000G1_scaffold_760_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17705..19945)
DNA (2241bp) protein (747aa)
Putative glycogen debranching enzyme, archaeal type n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GG32_9FIRM
Putative glycogen debranching enzyme, archaeal type {ECO:0000313|EMBL:EEU99225.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Glycogen debranching enzyme
L2_021_000G1_scaffold_760_18
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20290..20787
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B9U1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA55821.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_021_000G1_scaffold_760_19
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20814..21536
DNA (723bp) protein (241aa)
ABC-type transport system involved in Fe-S cluster assembly, ATPase component n=3 Tax=Roseburia RepID=D4L033_9FIRM
ABC-type transport system involved in Fe-S cluster assembly, ATPase component
ABC-type transport system involved in Fe-S cluster assembly ATPase component {ECO:0000313|EMBL:CDA55820.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_021_000G1_scaffold_760_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21536..22483
DNA (948bp) protein (316aa)
ABC-type transport system involved in Fe-S cluster assembly, permease component n=2 Tax=Roseburia intestinalis RepID=D4KLB6_9FIRM
ABC-type transport system involved in Fe-S cluster assembly, permease component
ABC-type transport system involved in Fe-S cluster assembly, permease component {ECO:0000313|EMBL:CBL07668.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_021_000G1_scaffold_760_21
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22488..22745)
DNA (258bp) protein (86aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=C7GG36_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA55818.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_021_000G1_scaffold_760_22
unknown

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comp(22920..23141)
DNA (222bp) protein (74aa)

This feature has no annotations

L2_021_000G1_scaffold_760_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23150..24250)
DNA (1101bp) protein (367aa)
Site-specific recombinase XerD n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KLB8_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBL07670.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_021_000G1_scaffold_760_24
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24417..24875)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0J0Z9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT26499.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
hypothetical protein
L2_021_000G1_scaffold_760_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24899..25264)
DNA (366bp) protein (122aa)
Predicted transcriptional regulators n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KLC0_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBL07672.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_021_000G1_scaffold_760_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25351..25815)
DNA (465bp) protein (155aa)
Helix-turn-helix n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KLB9_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBL07671.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_021_000G1_scaffold_760_27
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25996..26220
DNA (225bp) protein (75aa)
Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6L8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:KJJ66051.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
pi205; prophage pi2 protein 05
L2_021_000G1_scaffold_760_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26238..26444
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KLC2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07674.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_021_000G1_scaffold_760_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26461..26661
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1R9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13559.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_021_000G1_scaffold_760_30
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26663..26839
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B0K2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA56720.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Displaying items 1-30 of 37 in total

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