ggKbase home page

L2_021_000G1_scaffold_769

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_769_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..674)
DNA (672bp) protein (224aa)
2-hydroxyglutaryl-CoA dehydratase, D-component-like protein (Fragment) n=1 Tax=Bifidobacterium longum subsp. longum 1-6B RepID=I3AYA1_BIFLN
activator of 2-hydroxyglutaryl-CoA dehydratase
Putative CoA-substrate-specific enzyme activating protein {ECO:0000313|EMBL:BAP84096.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L2_021_000G1_scaffold_769_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(902..1630)
DNA (729bp) protein (243aa)
Anaerobic ribonucleoside-triphosphate reductase activating protein {ECO:0000313|EMBL:EIJ28388.1}; EC=1.97.1.4 {ECO:0000313|EMBL:EIJ28388.1};; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=17 Tax=Bifidobacterium RepID=B3DRJ3_BIFLD
ribonucleoside-triphosphate reductase activating protein
L2_021_000G1_scaffold_769_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1778..4186)
DNA (2409bp) protein (803aa)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EIJ25135.1}; EC=1.17.4.2 {ECO:0000313|EMBL:EIJ25135.1};; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Ribonucleoside-triphosphate reductase class III catalytic subunit n=15 Tax=Bifidobacterium RepID=D6DBN6_BIFLN
ribonucleoside triphosphate reductase
L2_021_000G1_scaffold_769_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4666..6024
DNA (1359bp) protein (453aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Exodeoxyribonuclease 7 large subunit n=12 Tax=Bifidobacterium RepID=E8MEQ0_BIFL2
exodeoxyribonuclease VII large subunit
L2_021_000G1_scaffold_769_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6074..6376
DNA (303bp) protein (101aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Exodeoxyribonuclease 7 small subunit n=12 Tax=Bifidobacterium RepID=D6DBN8_BIFLN
exodeoxyribonuclease VII small subunit
L2_021_000G1_scaffold_769_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6500..7024
DNA (525bp) protein (175aa)
Putative general stress protein 14 n=1 Tax=Bifidobacterium longum subsp. longum 44B RepID=I3BAC0_BIFLN
oxidoreductase
Putative general stress protein 14 {ECO:0000313|EMBL:EIJ28313.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_021_000G1_scaffold_769_7
Bifidobacterium saguini, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7160..7789)
DNA (630bp) protein (210aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:KFI91956.1}; EC=6.2.1.3 {ECO:0000313|EMBL:KFI91956.1};; TaxID=1437607 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saguini DSM 23967.;"
Putative CoA ligase n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0U8_BIFBR
long chain fatty acid CoA ligase
L2_021_000G1_scaffold_769_8
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7875..8624
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H724_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY20531.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L2_021_000G1_scaffold_769_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8651..9157)
DNA (507bp) protein (169aa)
Large-conductance mechanosensitive channel n=10 Tax=Bifidobacterium longum RepID=F8ATE6_BIFLN
large-conductance mechanosensitive channel
Large conductance mechanosensitive channel protein {ECO:0000313|EMBL:EIJ25180.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_021_000G1_scaffold_769_10
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9325..9753)
DNA (429bp) protein (143aa)
Nucleoside 2-deoxyribosyltransferase n=14 Tax=Bifidobacterium RepID=D6DBP2_BIFLN
nucleoside 2-deoxyribosyltransferase
Putative nucleoside 2-deoxyribosyltransferase {ECO:0000313|EMBL:CCY94869.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_021_000G1_scaffold_769_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9875..10093)
DNA (219bp) protein (73aa)
Histone acetyltransferase HPA2 n=3 Tax=Bifidobacterium longum RepID=S3E2W6_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK69914.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L2_021_000G1_scaffold_769_12
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10578..11690
DNA (1113bp) protein (371aa)
Endonuclease/Exonuclease/Phosphatase n=8 Tax=Bifidobacterium RepID=V6XZX0_BIFLN
Endonuclease/Exonuclease/phosphatase {ECO:0000313|EMBL:CCY94867.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
hypothetical protein
L2_021_000G1_scaffold_769_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11706..12674)
DNA (969bp) protein (323aa)
Exopolyphosphatase n=15 Tax=Bifidobacterium RepID=B3DRI3_BIFLD
exopolyphosphatase
Exopolyphosphatase {ECO:0000313|EMBL:ACD99365.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_021_000G1_scaffold_769_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12852..14075)
DNA (1224bp) protein (408aa)
Probable aspartate aminotransferase n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MSX7_9BIFI
aspartate aminotransferase
Probable aspartate aminotransferase {ECO:0000313|EMBL:AAN25525.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_021_000G1_scaffold_769_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14169..15224
DNA (1056bp) protein (352aa)
Oxidoreductase n=6 Tax=Bifidobacterium RepID=V6Y2F2_BIFLN
oxidoreductase
Probable oxidoreductase {ECO:0000313|EMBL:AAN25524.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_021_000G1_scaffold_769_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15255..15770)
DNA (516bp) protein (172aa)
DNA mismatch endonuclease Vsr {ECO:0000313|EMBL:EEQ55413.1}; EC=3.1.-.- {ECO:0000313|EMBL:EEQ55413.1};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
T/G mismatch-specific endonuclease (EC:3.1.-.-)
DNA mismatch endonuclease Vsr n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EBL9_BIFLI
L2_021_000G1_scaffold_769_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15853..16371
DNA (519bp) protein (173aa)
Acetyltransferase n=1 Tax=Bifidobacterium longum E18 RepID=V6XZX5_BIFLN
Acetyltransferase {ECO:0000313|EMBL:ESV34066.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
hypothetical protein
L2_021_000G1_scaffold_769_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16344..16832)
DNA (489bp) protein (163aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=B3DR77_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD99360.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_021_000G1_scaffold_769_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17020..20175)
DNA (3156bp) protein (1052aa)
Possible helicase n=5 Tax=Bifidobacterium longum RepID=Q8G3M2_BIFLO
Helicase {ECO:0000313|EMBL:KEY33497.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
helicase
L2_021_000G1_scaffold_769_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20172..20924)
DNA (753bp) protein (251aa)
Possible helicase n=5 Tax=Bifidobacterium longum RepID=Q8G3M2_BIFLO
helicase
Possible helicase {ECO:0000313|EMBL:AAN25520.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_021_000G1_scaffold_769_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21002..22087
DNA (1086bp) protein (362aa)
Uncharacterized protein n=13 Tax=Bifidobacterium longum RepID=Q8G3M3_BIFLO
hypothetical protein
Transcriptional regulator {ECO:0000313|EMBL:AIW44148.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_000G1_scaffold_769_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22072..22221)
DNA (150bp) protein (50aa)
Uncharacterized protein n=5 Tax=Bifidobacterium longum RepID=C2GVL1_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ71722.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_021_000G1_scaffold_769_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22321..23340
DNA (1020bp) protein (340aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_02122};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; Tetrahydropicolinate succinylase {ECO:0000256|HAMAP-Rule:MF_02122}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=14 Tax=Bifidobacterium RepID=DAPD_BIFLO
hypothetical protein
L2_021_000G1_scaffold_769_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23554..24846)
DNA (1293bp) protein (431aa)
Citrate synthase n=15 Tax=Bifidobacterium RepID=D6ZVV1_BIFLJ
citrate synthase
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_021_000G1_scaffold_769_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25120..25902)
DNA (783bp) protein (261aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Methionine aminopeptidase n=16 Tax=Bacteria RepID=F8ATD2_BIFLN
methionine aminopeptidase
L2_021_000G1_scaffold_769_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26049..27020)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DR71_BIFLD
hdeD; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD99354.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_021_000G1_scaffold_769_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27197..29371
DNA (2175bp) protein (725aa)
Peptidase family M13 {ECO:0000313|EMBL:EEI80825.1}; EC=3.4.24.- {ECO:0000313|EMBL:EEI80825.1};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Endothelin-converting enzyme . Metallo peptidase. MEROPS family M13 n=7 Tax=Bifidobacterium RepID=D6DBQ7_BIFLN
pepO; pepo
L2_021_000G1_scaffold_769_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29454..30191)
DNA (738bp) protein (246aa)
SSB3 n=9 Tax=Bifidobacterium RepID=E4R3W0_BIFLM
ssb3; ssb3
Single-strand binding family protein {ECO:0000313|EMBL:EIJ28354.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_021_000G1_scaffold_769_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(30467..32311)
DNA (1845bp) protein (615aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Proline--tRNA ligase n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EBK7_BIFLI
prolyl-tRNA synthase
L2_021_000G1_scaffold_769_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32672..33028
DNA (357bp) protein (119aa)
Uncharacterized protein n=7 Tax=Bifidobacterium longum RepID=C5EBK5_BIFLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY33488.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Displaying items 1-30 of 47 in total

View Taxonomy