ggKbase home page

L2_021_000G1_scaffold_962

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_962_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62..808
DNA (747bp) protein (249aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=340184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B7A.;"
kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase n=30 Tax=Escherichia coli RepID=B3HDD1_ECOLX
L2_021_000G1_scaffold_962_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

962..1855
DNA (894bp) protein (298aa)
Uncharacterized protein YcbJ n=877 Tax=Enterobacteriaceae RepID=YCBJ_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELI32156.1}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE112.;"
L2_021_000G1_scaffold_962_3
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1832..2611)
DNA (780bp) protein (260aa)
Inner membrane protein n=3 Tax=Escherichia coli RepID=L4B2B5_ECOLX
ycbC; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB62415.1}; TaxID=300267 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae serotype 1 (strain Sd197).;"
L2_021_000G1_scaffold_962_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2747..3532
DNA (786bp) protein (262aa)
S-adenosylmethionine-dependent methyltransferase n=176 Tax=Escherichia coli RepID=J7R2V8_ECOLX
putative metallothionein SmtA
Protein smtA {ECO:0000313|EMBL:KDU23787.1}; TaxID=1444251 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-267-03_S4_C2.;"
L2_021_000G1_scaffold_962_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3529..4851
DNA (1323bp) protein (441aa)
Chromosome partition protein MukF n=683 Tax=Enterobacteriaceae RepID=MUKF_ECO24
chromosome partition protein MukF
Chromosome partition protein MukF {ECO:0000256|HAMAP-Rule:MF_01803, ECO:0000256|SAAS:SAAS00085357}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C2.;"
L2_021_000G1_scaffold_962_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4832..5536
DNA (705bp) protein (235aa)
Chromosome partition protein MukE n=561 Tax=Enterobacteriaceae RepID=MUKE_ECOLI
condesin subunit E
Chromosome partition protein MukE {ECO:0000256|HAMAP-Rule:MF_01802}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C2.;"
L2_021_000G1_scaffold_962_7
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5536..9798
DNA (4263bp) protein (1421aa)
Chromosome partition protein MukB n=14 Tax=Escherichia coli RepID=G2CWB0_ECOLX
Chromosome partition protein MukB {ECO:0000256|HAMAP-Rule:MF_01800, ECO:0000256|SAAS:SAAS00054219}; Structural maintenance of chromosome-related protein {ECO:0000256|HAMAP-Rule:MF_01800}; TaxID=754093 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae 1617.;"
mukB; cell division protein MukB
L2_021_000G1_scaffold_962_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10059..11906
DNA (1848bp) protein (616aa)
Murein L,D-transpeptidase n=2 Tax=Escherichia coli RepID=T7D6N1_ECOLX
ycbB; hypothetical protein
Murein L,D-transpeptidase {ECO:0000313|EMBL:EZE11211.1}; TaxID=1446753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O69:H11 str. 08-4661.;"
L2_021_000G1_scaffold_962_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12087..12635
DNA (549bp) protein (183aa)
Uncharacterized protein YcbK n=1401 Tax=Enterobacteriaceae RepID=YCBK_ECO57
ycbK; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZJ44135.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L2_021_000G1_scaffold_962_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12662..13309
DNA (648bp) protein (216aa)
Uncharacterized protein n=428 Tax=Enterobacteriaceae RepID=J7QPB2_ECOLX
beta-lactamase domain-containing protein
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:ESA60541.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
L2_021_000G1_scaffold_962_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13531..14721)
DNA (1191bp) protein (397aa)
aspC; aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase {ECO:0000313|EMBL:KDY96657.1}; EC=2.6.1.1 {ECO:0000313|EMBL:KDY96657.1};; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C2.;"
Aspartate aminotransferase n=711 Tax=Enterobacteriaceae RepID=AAT_ECOLI
L2_021_000G1_scaffold_962_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14906..15994)
DNA (1089bp) protein (363aa)
Outer membrane protein F n=466 Tax=Enterobacteriaceae RepID=OMPF_ECOLI
outer membrane protein F
Outer membrane protein {ECO:0000313|EMBL:ESA60538.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
L2_021_000G1_scaffold_962_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16596..17996)
DNA (1401bp) protein (467aa)
asnS; asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LAU-EC10.;"
Asparagine--tRNA ligase n=1040 Tax=Enterobacteriaceae RepID=SYN_ECO24
L2_021_000G1_scaffold_962_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18165..19367)
DNA (1203bp) protein (401aa)
pncB; nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838}; Short=NAPRTase {ECO:0000256|HAMAP-Rule:MF_00570};; EC=6.3.4.21 {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838};; TaxID=1182701 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE102.;"
Nicotinate phosphoribosyltransferase n=363 Tax=Enterobacteriaceae RepID=PNCB_ECO24
L2_021_000G1_scaffold_962_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19633..21714
DNA (2082bp) protein (694aa)
pepN; aminopeptidase N (EC:3.4.11.2)
Aminopeptidase N n=1 Tax=Escherichia coli UMEA 3318-1 RepID=T9JFC4_ECOLX
Membrane alanyl aminopeptidase {ECO:0000313|EMBL:ESE07338.1}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908658.;"
L2_021_000G1_scaffold_962_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21677..22141
DNA (465bp) protein (155aa)
pepN; Membrane alanine aminopeptidase N (EC:3.4.11.2)
Aminopeptidase N {ECO:0000313|EMBL:EGW95893.1}; EC=3.4.11.2 {ECO:0000313|EMBL:EGW95893.1};; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli STEC_DG131-3.;"
Aminopeptidase N n=1 Tax=Escherichia coli 2867750 RepID=M8U5F1_ECOLX
L2_021_000G1_scaffold_962_17
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22348..22902)
DNA (555bp) protein (185aa)
Aliphatic sulfonates import ATP-binding protein SsuB n=1 Tax=Escherichia coli KTE142 RepID=L3V0E3_ECOLX
ssuB; aliphatic sulfonates transport ATP-binding subunit
ATPase {ECO:0000313|EMBL:EVT84894.1}; TaxID=1441931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA09.;"
L2_021_000G1_scaffold_962_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22899..23690)
DNA (792bp) protein (264aa)
Aliphatic sulfonates transport permease ssuC n=27 Tax=Enterobacteriaceae RepID=H1E2P1_ECOLX
ssuC; alkanesulfonate transporter permease
Alkanesulfonate transporter permease subunit {ECO:0000313|EMBL:EZE26147.1}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
L2_021_000G1_scaffold_962_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23701..24231)
DNA (531bp) protein (177aa)
alkanesulfonate monooxygenase (EC:1.14.14.5)
Alkanesulfonate monooxygenase {ECO:0000256|HAMAP-Rule:MF_01229, ECO:0000256|SAAS:SAAS00023380}; EC=1.14.14.5 {ECO:0000256|HAMAP-Rule:MF_01229, ECO:0000256|SAAS:SAAS00023380};; FMNH2-dependent aliphatic sulfonate monooxygenase {ECO:0000256|HAMAP-Rule:MF_01229}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
Alkanesulfonate monooxygenase n=18 Tax=Escherichia coli RepID=D8A7X2_ECOLX
L2_021_000G1_scaffold_962_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24657..25577)
DNA (921bp) protein (307aa)
Alkanesulfonate transporter subunit periplasmic-binding component of ABC superfamily n=85 Tax=Escherichia coli RepID=B7LE36_ECO55
alkanesulfonate transporter substrate-binding subunit
Putative aliphatic sulfonate binding protein {ECO:0000313|EMBL:CCQ27898.2}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_021_000G1_scaffold_962_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25570..26145)
DNA (576bp) protein (192aa)
ssuE; NAD(P)H-dependent FMN reductase (EC:1.5.1.29)
NAD(P)H-dependent FMN reductase n=91 Tax=Escherichia coli RepID=B7LE37_ECO55
NAD(P)H-dependent FMN reductase {ECO:0000313|EMBL:EYV12932.1}; TaxID=1446560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O121:H19 str. 2010C-3609.;"
L2_021_000G1_scaffold_962_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26501..26845
DNA (345bp) protein (115aa)
Fimbrial-like adhesin protein n=1 Tax=Escherichia coli KTE136 RepID=L4HS53_ECOLX
ycbQ; fimbrial-like adhesin protein
Fimbrial protein {ECO:0000313|EMBL:ESD13860.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
L2_021_000G1_scaffold_962_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26928..27629
DNA (702bp) protein (234aa)
Periplasmic pilus chaperone family protein n=149 Tax=Enterobacteriaceae RepID=A7ZK43_ECO24
ycbR; periplasmic pilin chaperone
Pili assembly chaperone {ECO:0000313|EMBL:EJE59980.1}; TaxID=1165944 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:H8 str. CVM9634.;"
L2_021_000G1_scaffold_962_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27654..30254
DNA (2601bp) protein (867aa)
Outer membrane usher protein fimD homolog n=74 Tax=Enterobacteriaceae RepID=B3WNB3_ECOLX
Putative outer membrane protein {ECO:0000313|EMBL:EGI46717.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
outer membrane usher protein
L2_021_000G1_scaffold_962_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30245..31315
DNA (1071bp) protein (357aa)
Homolog of Salmonella FimH protein n=98 Tax=Enterobacteriaceae RepID=J7R2X8_ECOLX
fimbrial-like adhesin protein
Fimbrial family protein {ECO:0000313|EMBL:EHX33596.1}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
L2_021_000G1_scaffold_962_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31327..31869
DNA (543bp) protein (181aa)
Fimbrial-like protein ycbU n=10 Tax=Escherichia coli RepID=D6HUZ3_ECOLX
Fimbrial-like protein ycbU {ECO:0000313|EMBL:EFE63480.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
ycbU; putative fimbrial-like adhesin protein
L2_021_000G1_scaffold_962_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31829..32392
DNA (564bp) protein (188aa)
Fimbrial protein n=77 Tax=Enterobacteriaceae RepID=E0IZ99_ECOLW
ycbV; fimbrial-like adhesin protein
Putative fimbrial-like protein {ECO:0000313|EMBL:ADD55777.1}; TaxID=701177 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O55:H7 (strain CB9615 / EPEC).;"
L2_021_000G1_scaffold_962_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32406..33095
DNA (690bp) protein (230aa)
Pili assembly chaperone n=28 Tax=Escherichia coli RepID=E0IZ98_ECOLW
ycbF; pili assembly chaperone
Pili assembly chaperone, N-terminal protein {ECO:0000313|EMBL:ADX51479.1}; Flags: Precursor;; TaxID=595495 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 55124 / KO11).;"
L2_021_000G1_scaffold_962_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33206..34216
DNA (1011bp) protein (337aa)
dihydroorotate dehydrogenase (EC:1.3.98.1)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:0000256|HAMAP-Rule:MF_00225}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908658.;"
Dihydroorotate dehydrogenase (quinone) n=751 Tax=Enterobacteriaceae RepID=PYRD_ECO24
L2_021_000G1_scaffold_962_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34390..34932
DNA (543bp) protein (181aa)
Cell division protein ZapC n=657 Tax=Enterobacteriaceae RepID=ZAPC_ECOLI
ycbW; hypothetical protein
Cell division protein ZapC {ECO:0000256|HAMAP-Rule:MF_00906, ECO:0000256|PIRNR:PIRNR010252}; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2871950.;"
Displaying items 1-30 of 81 in total

View Taxonomy