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L2_021_000G1_scaffold_1323

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_1323_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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328..963
DNA (636bp) protein (212aa)
Translation initiation factor 3 n=13 Tax=Bifidobacterium RepID=B3DQT2_BIFLD
infC; infc
Translation initiation factor IF-3 {ECO:0000313|EMBL:KEY31456.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_021_000G1_scaffold_1323_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


944..1138
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=20 Tax=Bifidobacterium RepID=RL35_BIFLD
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_000G1_scaffold_1323_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


1191..1574
DNA (384bp) protein (128aa)
50S ribosomal protein L20 n=14 Tax=Bifidobacterium RepID=RL20_BIFLD
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L2_021_000G1_scaffold_1323_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1635..2570
DNA (936bp) protein (312aa)
Tyrosine recombinase XerD n=14 Tax=Bifidobacterium RepID=D6DCV1_BIFLN
integrase/recombinase
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_021_000G1_scaffold_1323_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2698..5544
DNA (2847bp) protein (949aa)
ABC-type antimicrobial peptide transport system, ATPase component n=11 Tax=Bifidobacterium RepID=D6DCV2_BIFLN
ABC transporter {ECO:0000313|EMBL:KEY25581.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
hypothetical protein
L2_021_000G1_scaffold_1323_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5746..6645
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G4K9_BIFLO
hypothetical protein
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EEI79760.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_021_000G1_scaffold_1323_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6664..7578
DNA (915bp) protein (305aa)
Condensin subunit ScpA n=12 Tax=Bifidobacterium RepID=D6DCV4_BIFLN
hypothetical protein
Condensin subunit ScpA {ECO:0000313|EMBL:CBK70325.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L2_021_000G1_scaffold_1323_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7630..8307
DNA (678bp) protein (226aa)
Segregation and condensation protein ScpB n=15 Tax=Bifidobacterium RepID=V6XX05_BIFLN
hypothetical protein
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_000G1_scaffold_1323_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8439..9266
DNA (828bp) protein (276aa)
Hydrolase, NUDIX family n=6 Tax=Bifidobacterium longum RepID=C5EC01_BIFLI
hypothetical protein
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:KEY31448.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_021_000G1_scaffold_1323_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9326..10606
DNA (1281bp) protein (427aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00569}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00569};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Quinolinate synthase A n=15 Tax=Bifidobacterium RepID=E4R2A4_BIFLM
quinolinate synthase
L2_021_000G1_scaffold_1323_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10698..12338
DNA (1641bp) protein (547aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
NadB n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R2A5_BIFLM
nadB; nadb
L2_021_000G1_scaffold_1323_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12342..13235
DNA (894bp) protein (298aa)
NadC n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R2A6_BIFLM
nadC; nadc
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:KEY31445.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_021_000G1_scaffold_1323_13
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13238..14485
DNA (1248bp) protein (416aa)
Cysteine sulfinate desulfinase/cysteine desulfurase n=13 Tax=Bifidobacterium RepID=B3DQU4_BIFLD
pyridoxal-phosphate-dependent aminotransferase
Putative pyridoxal-phosphate-dependent aminotransferase {ECO:0000313|EMBL:CCY95676.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_021_000G1_scaffold_1323_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14517..15866
DNA (1350bp) protein (450aa)
Sugar transport protein n=15 Tax=Bifidobacterium RepID=F8APL3_BIFLN
sugar transport protein
Transporter, major facilitator family protein {ECO:0000313|EMBL:EIJ26957.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_021_000G1_scaffold_1323_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16117..18048
DNA (1932bp) protein (644aa)
GTP-binding protein TypA/BipA n=12 Tax=Bifidobacterium RepID=D6DCW1_BIFLN
Widely conserved protein similar to those annotated as GTP-binding elongation factor TypA/BipA {ECO:0000313|EMBL:AAN25180.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
GTP-binding protein
L2_021_000G1_scaffold_1323_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18148..18594
DNA (447bp) protein (149aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=B3DQU7_BIFLD
alcohol dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:ACD97693.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_021_000G1_scaffold_1323_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18683..19651
DNA (969bp) protein (323aa)
Prephenate dehydratase n=14 Tax=Bifidobacterium RepID=B3DQU8_BIFLD
chorismate mutase
Prephenate dehydratase {ECO:0000313|EMBL:ACD97694.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_021_000G1_scaffold_1323_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19645..20712
DNA (1068bp) protein (356aa)
PdhA n=4 Tax=Bifidobacterium RepID=E4R2B2_BIFLM
pdhA; pdha
Probable prephenate dehydrogenase {ECO:0000313|EMBL:AAN25183.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_021_000G1_scaffold_1323_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20924..21181
DNA (258bp) protein (86aa)
Uncharacterized protein n=20 Tax=Bifidobacterium RepID=B3DQV0_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD97696.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_021_000G1_scaffold_1323_20
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21216..21539
DNA (324bp) protein (108aa)
Tyrosine recombinase XerC n=6 Tax=Bifidobacterium RepID=E4R2B4_BIFLM
tyrosine recombinase
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_021_000G1_scaffold_1323_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21668..22117
DNA (450bp) protein (150aa)
Tyrosine recombinase XerC n=1 Tax=Bifidobacterium longum subsp. longum 1-6B RepID=I3B8D0_BIFLN
tyrosine recombinase
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_021_000G1_scaffold_1323_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22371..24011
DNA (1641bp) protein (547aa)
Dipeptide ABC transporter substrate binding component n=8 Tax=Bifidobacterium longum RepID=E8MJD2_BIFL2
dipeptide ABC transporter substrate-binding protein
Dipeptide ABC transporter substrate binding component {ECO:0000313|EMBL:BAJ66885.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_021_000G1_scaffold_1323_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24312..25238
DNA (927bp) protein (309aa)
ABC-type dipeptide/oligopeptide/nickel transport systems permease component n=9 Tax=Bifidobacterium RepID=B3DQV3_BIFLD
ABC transporter permease
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:CCK35178.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L2_021_000G1_scaffold_1323_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25711..26124
DNA (414bp) protein (138aa)
Binding--dependent transport system inner membrane component family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I1M7_BIFLN
peptide ABC transporter permease
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:CCK35177.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L2_021_000G1_scaffold_1323_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26147..26809
DNA (663bp) protein (221aa)
ATPase components of various ABC-type transport systems, contain duplicated ATPase n=5 Tax=Bifidobacterium RepID=D6DCW8_BIFLN
appF2; appf2
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:ESV33766.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L2_021_000G1_scaffold_1323_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26758..27123
DNA (366bp) protein (122aa)
Oligopeptide/dipeptide transporter, C-terminal domain protein n=1 Tax=Bifidobacterium longum subsp. longum 44B RepID=I3BH96_BIFLN
dipeptide ABC transporter ATP-binding protein
Dipeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:AEI97298.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_021_000G1_scaffold_1323_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27113..27706
DNA (594bp) protein (198aa)
ATPase components of various ABC-type transport systems, contain duplicated ATPase n=5 Tax=Bifidobacterium RepID=D6DCW8_BIFLN
appF2; appf2
DppD {ECO:0000313|EMBL:AAN25189.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_021_000G1_scaffold_1323_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27762..28520
DNA (759bp) protein (253aa)
Possible exodeoxyribonuclease n=6 Tax=Bifidobacterium longum RepID=Q8G4J1_BIFLO
exodeoxyribonuclease III
Exodeoxyribonuclease III {ECO:0000313|EMBL:AIW43899.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_000G1_scaffold_1323_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28623..29132
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I2G9_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHD94922.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L2_021_000G1_scaffold_1323_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29148..29906
DNA (759bp) protein (253aa)
Integral membrane alanine and leucine rich like protein n=4 Tax=Bifidobacterium RepID=S3E3D7_BIFLN
Mn2+/Zn2+ ABC transporter permease
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ66878.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
Displaying items 1-30 of 57 in total

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