ggKbase home page

L2_021_000G1_scaffold_1583

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_1583_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..372
DNA (372bp) protein (124aa)
Bicyclomycin resistance protein n=1 Tax=Escherichia coli P0304816.14 RepID=N4A3I7_ECOLX
bcr; bicyclomycin/multidrug efflux system protein
Multidrug transporter {ECO:0000313|EMBL:ETD62499.1}; TaxID=1405293 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ATCC BAA-2209.;"
L2_021_000G1_scaffold_1583_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(920..2509)
DNA (1590bp) protein (530aa)
Fused predicted oligopeptide transporter subunits of ABC superfamilly: ATP-binding components n=72 Tax=Escherichia coli RepID=C8TUA5_ECO26
yejF; fused oligopeptide transporter subunits of ABC superfamily: ATP-binding components
Microcin ABC transporter ATP-binding protein {ECO:0000313|EMBL:EZE48478.1}; TaxID=1446549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O118:H16 str. 2009C-4446.;"
L2_021_000G1_scaffold_1583_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2511..3536)
DNA (1026bp) protein (342aa)
ABC transporter, permease protein n=705 Tax=Enterobacteriaceae RepID=A8A242_ECOHS
inner membrane ABC transporter permease YejE
ABC transporter, permease protein {ECO:0000313|EMBL:ESA91838.1}; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 909945-2.;"
L2_021_000G1_scaffold_1583_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3536..4630)
DNA (1095bp) protein (365aa)
ABC transporter, permease protein n=182 Tax=Escherichia coli RepID=A7ZP02_ECO24
microcin C ABC transporter permease YejB
Inner membrane ABC transporter permease protein yejB {ECO:0000313|EMBL:KEL86644.1}; TaxID=1444157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S3_C2.;"
L2_021_000G1_scaffold_1583_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4631..6445)
DNA (1815bp) protein (605aa)
Extracellular solute-binding protein family 5 n=59 Tax=Escherichia coli RepID=E0IYB9_ECOLW
oligopeptide ABC transporter substrate-binding protein
YejA protein {ECO:0000313|EMBL:CAU98301.1}; TaxID=585055 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain 55989 / EAEC).;"
L2_021_000G1_scaffold_1583_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6527..8083)
DNA (1557bp) protein (519aa)
Uncharacterized protein n=61 Tax=Enterobacteriaceae RepID=B7LAK0_ECO55
EAL domain protein {ECO:0000313|EMBL:KEN67699.1}; TaxID=1444275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C3.;"
hypothetical protein
L2_021_000G1_scaffold_1583_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8264..8830)
DNA (567bp) protein (189aa)
Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase n=1132 Tax=Enterobacteriaceae RepID=MEPS_ECO57
lipoprotein NlpC
Lipoprotein spr {ECO:0000313|EMBL:EGI11821.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H736.;"
L2_021_000G1_scaffold_1583_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9242..9955)
DNA (714bp) protein (238aa)
Uncharacterized protein n=179 Tax=Enterobacteriaceae RepID=J7R6D4_ECOLX
hypothetical protein
PAP2 family protein {ECO:0000313|EMBL:EIH25729.1}; TaxID=869675 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2264.;"
L2_021_000G1_scaffold_1583_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9994..10980)
DNA (987bp) protein (329aa)
Uncharacterized protein n=370 Tax=Enterobacteriaceae RepID=J7Q8F4_ECOLX
cobalamin synthesis protein P47K
CobW/HypB/UreG, nucleotide-binding domain protein {ECO:0000313|EMBL:EHW16407.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
L2_021_000G1_scaffold_1583_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11098..12564)
DNA (1467bp) protein (489aa)
D-mannonate oxidoreductase n=13 Tax=Escherichia coli RepID=G2BSG6_ECOLX
yeiQ; putative sugar dehydrogenase
Mannitol dehydrogenase domain protein {ECO:0000313|EMBL:EFK45894.1}; TaxID=679206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 119-7.;"
L2_021_000G1_scaffold_1583_11
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12787..13359)
DNA (573bp) protein (191aa)
Elongation factor P (EF-P) n=13 Tax=Enterobacteriaceae RepID=D7YNX5_ECOLX
elongation factor P-like protein YeiP
Elongation factor P-like protein {ECO:0000256|HAMAP-Rule:MF_00646, ECO:0000256|SAAS:SAAS00055120}; TaxID=1401327 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae WRSd3.;"
L2_021_000G1_scaffold_1583_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13514..13768
DNA (255bp) protein (85aa)
Uncharacterized protein n=93 Tax=Enterobacteriaceae RepID=B7LAJ4_ECO55
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESP08164.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
L2_021_000G1_scaffold_1583_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13765..14946)
DNA (1182bp) protein (394aa)
Sugar efflux transporter B n=306 Tax=Enterobacteriaceae RepID=A7ZNZ4_ECO24
putative transport protein
Sugar efflux transporter B {ECO:0000313|EMBL:EOW13216.1}; TaxID=1182702 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE103.;"
L2_021_000G1_scaffold_1583_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15314..16444
DNA (1131bp) protein (377aa)
Fructose-specific phosphocarrier protein HPr n=102 Tax=Escherichia coli RepID=D6HYS8_ECOLX
Phosphocarrier, HPr family protein {ECO:0000313|EMBL:KEN99822.1}; TaxID=1444219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C1.;"
fruB; bifunctional fructose-specific PTS IIA/HPr protein
L2_021_000G1_scaffold_1583_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16444..17382
DNA (939bp) protein (313aa)
fruK; 1-phosphofructokinase (EC:2.7.1.56)
1-phosphofructokinase n=1392 Tax=Enterobacteriaceae RepID=K1PF_ECO57
Phosphofructokinase {ECO:0000256|PIRNR:PIRNR000535}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L2_021_000G1_scaffold_1583_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17399..19090
DNA (1692bp) protein (564aa)
PTS system, Fru family, IIB component domain protein {ECO:0000313|EMBL:ENA07273.1}; EC=2.7.1.69 {ECO:0000313|EMBL:ENA07273.1};; TaxID=1116047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0299917.1.;"
PTS system, fructose-specific, IIBC component n=161 Tax=Escherichia coli RepID=A7ZNZ0_ECO24
fruA; PTS system fructose-specific transporter subunit IIBC
L2_021_000G1_scaffold_1583_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19221..20162
DNA (942bp) protein (314aa)
Pseudouridine kinase n=212 Tax=Enterobacteriaceae RepID=J9ZLJ1_ECO14
pseudouridine kinase
Putative uncharacterized protein {ECO:0000313|EMBL:EFE62774.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
L2_021_000G1_scaffold_1583_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20150..21088
DNA (939bp) protein (313aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=1182704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE108.;"
Pseudouridine-5'-phosphate glycosidase n=127 Tax=Escherichia coli RepID=B7LAI8_ECO55
hypothetical protein
L2_021_000G1_scaffold_1583_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21182..22432
DNA (1251bp) protein (417aa)
Putative pseudouridine transporter n=334 Tax=Enterobacteriaceae RepID=PSUT_ECOLI
nucleoside transporter
Nucleoside permease {ECO:0000256|RuleBase:RU362018}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
L2_021_000G1_scaffold_1583_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22503..23201)
DNA (699bp) protein (233aa)
Regulatory protein Nsr n=4 Tax=Escherichia coli RepID=B3H8W2_ECOLX
Regulatory protein nsr {ECO:0000313|EMBL:EGB89853.1}; TaxID=749539 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 117-3.;"
yeiL; DNA-binding transcriptional activator YeiL
L2_021_000G1_scaffold_1583_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23331..24272
DNA (942bp) protein (314aa)
Pyrimidine-specific ribonucleoside hydrolase RihB {ECO:0000256|HAMAP-Rule:MF_01433}; EC=3.2.2.8 {ECO:0000256|HAMAP-Rule:MF_01433};; Cytidine/uridine-specific hydrolase {ECO:0000256|HAMAP-Rule:MF_01433}; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 78-1.;"
Pyrimidine-specific ribonucleoside hydrolase RihB n=227 Tax=Escherichia coli RepID=RIHB_ECO55
rihB; ribonucleoside hydrolase
L2_021_000G1_scaffold_1583_22
Escherichia sp. KTE96, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24372..25496
DNA (1125bp) protein (375aa)
Nucleoside permease nupX n=1 Tax=Escherichia coli UMEA 3314-1 RepID=T9JB58_ECOLX
Nucleoside permease {ECO:0000256|RuleBase:RU362018}; TaxID=1182697 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE96.;"
yeiJ; putative sodium/proton nucleoside transporter
L2_021_000G1_scaffold_1583_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25552..26451)
DNA (900bp) protein (300aa)
PfkB carbohydrate kinase family protein n=3 Tax=Escherichia coli RepID=N3IAR1_ECOLX
hypothetical protein
PfkB carbohydrate kinase family protein {ECO:0000313|EMBL:EHU24961.1}; TaxID=868137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1E.;"
L2_021_000G1_scaffold_1583_24
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26455..26637)
DNA (183bp) protein (61aa)
endonuclease IV (EC:3.1.21.2)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1432547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae IS22.;"
Probable endonuclease 4 n=10 Tax=Escherichia coli RepID=C6EAF4_ECOBD
L2_021_000G1_scaffold_1583_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26627..27154)
DNA (528bp) protein (176aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O174:H8 str. 04-3038.;"
Probable endonuclease 4 n=1 Tax=Escherichia coli 2788150 RepID=M8ZVK2_ECOLX
hypothetical protein
L2_021_000G1_scaffold_1583_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27228..28277)
DNA (1050bp) protein (350aa)
UPF0324 inner membrane protein YeiH n=1158 Tax=Enterobacteriaceae RepID=YEIH_ECO57
hypothetical protein
Putative membrane protein YeiH {ECO:0000313|EMBL:CDK45281.1}; TaxID=1433131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS1.;"
L2_021_000G1_scaffold_1583_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28376..29257
DNA (882bp) protein (294aa)
Uncharacterized HTH-type transcriptional regulator YeiE n=1182 Tax=Enterobacteriaceae RepID=YEIE_ECO57
yeiE; putative DNA-binding transcriptional regulator
LysR substrate binding domain protein {ECO:0000313|EMBL:EFK49364.1}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
L2_021_000G1_scaffold_1583_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29462..30931
DNA (1470bp) protein (490aa)
Lysine-specific permease n=666 Tax=Enterobacteriaceae RepID=LYSP_ECOLI
lysine transporter
Lysine-specific permease {ECO:0000313|EMBL:EOV78300.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L2_021_000G1_scaffold_1583_29
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31224..33215
DNA (1992bp) protein (664aa)
Colicin I receptor n=1 Tax=Escherichia coli HVH 139 (4-3192644) RepID=T7CVH0_ECOLX
catecholate siderophore receptor CirA
Catecholate siderophore receptor CirA {ECO:0000313|EMBL:CDC75866.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
L2_021_000G1_scaffold_1583_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33247..34083)
DNA (837bp) protein (279aa)
S-formylglutathione hydrolase {ECO:0000313|EMBL:KEN97248.1}; EC=3.1.2.12 {ECO:0000313|EMBL:KEN97248.1};; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
S-formylglutathione hydrolase yeiG n=1 Tax=Escherichia coli HVH 139 (4-3192644) RepID=T7CA48_ECOLX
yeiG; putative esterase
Displaying items 1-30 of 64 in total

View Taxonomy