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L2_021_000G1_scaffold_1717

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_1717_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..309)
DNA (309bp) protein (103aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G6H0_BIFLO
nrdF; nrdf
L2_021_000G1_scaffold_1717_2
unknown

Not on your lists

comp(325..414)
DNA (90bp) protein (30aa)

This feature has no annotations

L2_021_000G1_scaffold_1717_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(535..1827)
DNA (1293bp) protein (431aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
Ribonucleoside-diphosphate reductase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8APH3_BIFLN
ribonucleotide-diphosphate reductase subunit alpha
L2_021_000G1_scaffold_1717_4
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1847..2617
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Rothia mucilaginosa (strain DY-18) RepID=D2NSX3_ROTMD
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAI64749.1}; TaxID=680646 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa (strain DY-18) (Stomatococcus mucilaginosus).;"
L2_021_000G1_scaffold_1717_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2542..3000)
DNA (459bp) protein (153aa)
Protein NrdI n=7 Tax=Bifidobacterium longum RepID=B3DP47_BIFLD
ribonucleotide reductase
Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_021_000G1_scaffold_1717_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2997..3263)
DNA (267bp) protein (89aa)
Ribonucleoside-diphosphate reductase class Ib glutaredoxin subunit {ECO:0000313|EMBL:CBK71375.1}; EC=1.17.4.1 {ECO:0000313|EMBL:CBK71375.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Glutaredoxin-like protein NrdH n=19 Tax=Bifidobacterium RepID=Q8G6H3_BIFLO
glutaredoxin
L2_021_000G1_scaffold_1717_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3851..4501)
DNA (651bp) protein (217aa)
DNA-binding helix-turn-helix protein n=3 Tax=Bifidobacterium RepID=C2GWT9_BIFLN
hypothetical protein
XRE family transcriptional regulator {ECO:0000313|EMBL:KEY24081.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_021_000G1_scaffold_1717_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4485..5165)
DNA (681bp) protein (227aa)
PF13151 family protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AQM5_BIFLN
PF13151 family protein {ECO:0000313|EMBL:EIJ21418.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
hypothetical protein
L2_021_000G1_scaffold_1717_9
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5327..6127
DNA (801bp) protein (267aa)
Kch n=9 Tax=Bifidobacterium RepID=E4R1Q5_BIFLM
Potassium transport protein {ECO:0000313|EMBL:CCY95569.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
potassium transport protein
L2_021_000G1_scaffold_1717_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6320..7426
DNA (1107bp) protein (369aa)
Uncharacterized protein n=11 Tax=Bifidobacterium longum RepID=Q8G6H8_BIFLO
hypothetical protein
ATPase AAA {ECO:0000313|EMBL:KEY24078.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_021_000G1_scaffold_1717_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7564..7932)
DNA (369bp) protein (123aa)
Glycosyl hydrolase family 3 N-terminal domain protein n=8 Tax=Bifidobacterium longum RepID=C2GWU4_BIFLN
hypothetical protein
Glycosyl hydrolase family 3, N-terminal domain protein {ECO:0000313|EMBL:EIJ21415.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_021_000G1_scaffold_1717_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8339..10579
DNA (2241bp) protein (747aa)
Widely conserved protein with eukaryotic protein kinase domain n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G6I0_BIFLO
Widely conserved protein with eukaryotic protein kinase domain {ECO:0000313|EMBL:AAN24482.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
hypothetical protein
L2_021_000G1_scaffold_1717_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10757..11734
DNA (978bp) protein (326aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=Q8G6I1_BIFLO
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:AIW43078.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_000G1_scaffold_1717_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12253..12528
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R1Q0_BIFLM
hypothetical protein
G5 domain protein {ECO:0000313|EMBL:EIJ32413.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_021_000G1_scaffold_1717_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12498..13538
DNA (1041bp) protein (347aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=Q8G6I2_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24480.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_021_000G1_scaffold_1717_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


13535..14305
DNA (771bp) protein (257aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000255|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000255|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000255|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000255|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000255|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000255|HAMAP-Rule:MF_00607}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Ribosomal RNA small subunit methyltransferase A n=2 Tax=Bifidobacterium longum RepID=RSMA_BIFLD
ksgA; dimethyladenosine transferase
L2_021_000G1_scaffold_1717_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14302..15099
DNA (798bp) protein (266aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000255|HAMAP-Rule:MF_00061}; Short=CMK {ECO:0000255|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000255|HAMAP-Rule:MF_00061};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000255|HAMAP-Rule:MF_00061}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=10 Tax=Bifidobacterium RepID=ISPE_BIFLO
ispE; ispe
L2_021_000G1_scaffold_1717_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15146..15775
DNA (630bp) protein (210aa)
Uncharacterized protein n=14 Tax=Bifidobacterium RepID=B3DP36_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD98895.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_021_000G1_scaffold_1717_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15860..17275)
DNA (1416bp) protein (472aa)
Putative RNA nucleotidyltransferase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MWG7_BIFL1
RNA nucleotidyltransferase
Putative RNA nucleotidyltransferase {ECO:0000313|EMBL:BAJ72111.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_021_000G1_scaffold_1717_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17362..18654
DNA (1293bp) protein (431aa)
ADP-ribose pyrophosphatase n=10 Tax=Bifidobacterium RepID=B3DP34_BIFLD
ADP-ribose pyrophosphatase
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:KEY33269.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_021_000G1_scaffold_1717_21
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18651..20921
DNA (2271bp) protein (757aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NFK8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY96126.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
hypothetical protein
L2_021_000G1_scaffold_1717_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20918..22645
DNA (1728bp) protein (576aa)
Virulence factor mviN n=2 Tax=Bifidobacterium longum RepID=S3DRY8_BIFLN
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ67586.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
hypothetical protein
L2_021_000G1_scaffold_1717_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22728..24791
DNA (2064bp) protein (688aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DP31_BIFLD
Uncharacterized protein {ECO:0000313|EMBL:ACD98890.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
hypothetical protein
L2_021_000G1_scaffold_1717_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24911..26098
DNA (1188bp) protein (396aa)
Thioredoxin-disulfide reductase {ECO:0000313|EMBL:EEI80386.1}; EC=1.8.1.9 {ECO:0000313|EMBL:EEI80386.1};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Thioredoxin reductase n=7 Tax=Bacteria RepID=E8MFW1_BIFL2
thioredoxin reductase
L2_021_000G1_scaffold_1717_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25957..27318)
DNA (1362bp) protein (454aa)
Chromosome partitioning protein ParB n=10 Tax=Bifidobacterium RepID=F8APE1_BIFLN
chromosome partitioning protein ParB
Chromosome partitioning protein ParB {ECO:0000313|EMBL:KEY30888.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_021_000G1_scaffold_1717_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27318..28289)
DNA (972bp) protein (324aa)
ATPase for chromosome partitioning n=9 Tax=Bifidobacterium longum RepID=B3DP28_BIFLD
chromosome partitioning protein ParA
ATPase for chromosome partitioning {ECO:0000313|EMBL:ACD98887.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_021_000G1_scaffold_1717_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28540..29205)
DNA (666bp) protein (222aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Ribosomal RNA small subunit methyltransferase G n=12 Tax=Bifidobacterium RepID=RSMG_BIFLD
glucose-inhibited division protein
L2_021_000G1_scaffold_1717_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29357..29890)
DNA (534bp) protein (178aa)
R3H domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=C2GY43_BIFLN
hypothetical protein
Jag protein {ECO:0000313|EMBL:BAP84542.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L2_021_000G1_scaffold_1717_29
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30014..31021)
DNA (1008bp) protein (336aa)
Membrane protein insertase YidC n=12 Tax=Bifidobacterium RepID=YIDC_BIFLO
yidC2; preprotein translocase subunit
YidC/Oxa1 family membrane protein insertase {ECO:0000313|EMBL:EFV37637.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_021_000G1_scaffold_1717_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31332..31691)
DNA (360bp) protein (120aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Ribonuclease P protein component n=17 Tax=Bifidobacterium RepID=RNPA_BIFLD
ribonuclease P
Displaying items 1-30 of 46 in total

View Taxonomy