ggKbase home page

L2_021_000G1_scaffold_36_5

Organism: L2_021_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 19
Location: 5147..6415

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=44 Tax=Lactobacillus RepID=B3WEK4_LACCB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 422.0
  • Bit_score: 811
  • Evalue 3.30e-232
RNA polymerase sigma-70 subunit RpoD similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 422.0
  • Bit_score: 811
  • Evalue 9.50e-233
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=537973 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei 8700:2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 422.0
  • Bit_score: 811
  • Evalue 4.70e-232

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lactobacillus paracasei → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1269
ATGGCTGATAAAAAAACAGCAACTGAAGTAGACAAGACCACAAAGAAGACAACGGCTAAGCCAGCAGCAAAAACTGCGGCTAAGACAACCGCTGTCAAGGCGGCGGCAAAAAAGACCACCGCGAAGAAAACTACGGTCAAGAAGACTACCGCTAGCAGCAAACGCACGACCAAAACGACAACGAAAGCATTCGACGATGCTGTCAAGGCCGTGATTAAAGATTACAAGAAGAAGAAACAAATTACTGAAGATGACCTGACCGACAAGTTGGTTAAGCCGTTTGAGCTCAAGAGTGGTGCCATTGACGATCTGATGCAAAAGATCGAGGATAATGGGATTGCTATTGTTGATGAAAATGGCGAGCCAGCAGCGATTAGCTTGAAGAAGCAAAAGAAGGTTTCCAAGAAGGAAATGAGTGACATGTCCGCACCTTCAGGGGTCAAAATCAATGACCCTGTGCGGATGTACCTGAAGGAAATCGGCCGAGTTTCCTTGCTGACAGCTGATGAAGAAGTTGCCCTTGCCTTGAAGATTGAACAAGGTGATCAAGAAGCTAAGCAACGTTTGGCTGAAGCTAACTTGCGACTGGTTGTTTCCATCGCTAAGCGTTATGTTGGTCGCGGCATGCAATTCCTGGATCTGATTCAGGAAGGGAACATGGGGCTGATGAAGGCGGTCGAGAAATTCGATTACCGGAAAGGCTTTAAGTTCTCAACGTATGCCACCTGGTGGATTCGGCAGGCTATTACCCGTGCCATCGCTGACCAAGCCCGGACAATTCGGATTCCAGTGCATATGGTTGAAACCATTAACAAATTGATTCGGATTCAACGGCAACTGCTTCAAGACCTTGGTCGTGAACCAACGCCTGAAGAAATCGGCGCGGAAATGGACATGCCAACTGAAAAGGTTCGCGAAATCCTGAAGATTGCGCAAGAACCTGTTTCCTTGGAAACGCCAATTGGTGAAGAGGATGATTCACATCTTGGCGACTTCATTGAAGACCAAGACGCCACCAGTCCTGAAGACCATGCTTCCTATGAACTGCTCAAAGAACAGTTGGAAAGTGTGCTGGATACCTTAACGGATCGTGAAGAAAATGTTTTGCGGTTGCGTTTTGGACTCGATGATGGCCGGACCCGTACCTTGGAAGAGGTCGGCAAGGTCTTTGGCGTGACCCGCGAGCGAATTCGTCAAATCGAAGCTAAGGCATTGCGGAAGCTCCGCCACCCAAGCCGTTCCAAGCAACTTAAGGATTTTCTTGAGTAA
PROTEIN sequence
Length: 423
MADKKTATEVDKTTKKTTAKPAAKTAAKTTAVKAAAKKTTAKKTTVKKTTASSKRTTKTTTKAFDDAVKAVIKDYKKKKQITEDDLTDKLVKPFELKSGAIDDLMQKIEDNGIAIVDENGEPAAISLKKQKKVSKKEMSDMSAPSGVKINDPVRMYLKEIGRVSLLTADEEVALALKIEQGDQEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVEKFDYRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQLLQDLGREPTPEEIGAEMDMPTEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPEDHASYELLKEQLESVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRSKQLKDFLE*