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L2_021_000G1_scaffold_423

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_423_1
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(445..1983)
DNA (1539bp) protein (513aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Actinomyces sp. ICM39 RepID=J2ZDE1_9ACTO
(dimethylallyl)adenosine tRNA methylthiotransferase
L2_021_000G1_scaffold_423_2
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1995..2507)
DNA (513bp) protein (171aa)
Competence/damage-inducible domain protein CinA n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BD51_9ACTO
Competence/damage-inducible protein CinA {ECO:0000313|EMBL:EWC98529.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
CinA domain-containing protein
L2_021_000G1_scaffold_423_3
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2495..3121)
DNA (627bp) protein (209aa)
Regulatory protein RecX n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U0L1_9ACTO
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
putative regulatory protein RecX
L2_021_000G1_scaffold_423_4
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(3125..4216)
DNA (1092bp) protein (364aa)
recA protein (EC:3.6.3.8)
Protein RecA n=3 Tax=Actinomyces RepID=D4U0L0_9ACTO
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
L2_021_000G1_scaffold_423_5
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4466..4690)
DNA (225bp) protein (75aa)
PF11248 family protein n=1 Tax=Actinomyces sp. ICM39 RepID=J2YSC6_9ACTO
PF11248 family protein {ECO:0000313|EMBL:EJN46722.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
L2_021_000G1_scaffold_423_6
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4694..5059)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZAH7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD71385.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
Helix-turn-helix protein
L2_021_000G1_scaffold_423_7
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5179..5940)
DNA (762bp) protein (254aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EWC98564.1}; EC=2.7.8.5 {ECO:0000313|EMBL:EWC98564.1};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Actinomyces sp. ICM39 RepID=J2ZDF1_9ACTO
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase
L2_021_000G1_scaffold_423_8
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5958..8801)
DNA (2844bp) protein (948aa)
FtsK/SpoIIIE family protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BD57_9ACTO
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:EWC98527.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
cell division protein FtsK
L2_021_000G1_scaffold_423_9
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8859..9845)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z3L7_9ACTO
Carbohydrate kinase, PfkB family {ECO:0000313|EMBL:EWC98555.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
carbohydrate kinase
L2_021_000G1_scaffold_423_10
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9876..11615)
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U0K2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EWC98516.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
beta-lactamase domain-containing protein
L2_021_000G1_scaffold_423_11
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11665..12342)
DNA (678bp) protein (226aa)
Phosphonate-transporting ATPase (EC:3.6.3.28)
ABC transporter, ATP-binding protein n=2 Tax=Actinomyces odontolyticus RepID=A7BD60_9ACTO
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EWC98546.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
L2_021_000G1_scaffold_423_12
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12344..13552)
DNA (1209bp) protein (403aa)
Efflux ABC transporter, permease protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U0K0_9ACTO
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EFF79338.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
hypothetical protein
L2_021_000G1_scaffold_423_13
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13580..14770)
DNA (1191bp) protein (397aa)
Efflux ABC transporter, permease protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U0J9_9ACTO
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EWC98557.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
hypothetical protein
L2_021_000G1_scaffold_423_14
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14767..15681)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BD63_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EDN81137.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
hypothetical protein
L2_021_000G1_scaffold_423_15
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15662..16078)
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Actinomyces odontolyticus RepID=A7BD64_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFF79335.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
hypothetical protein
L2_021_000G1_scaffold_423_16
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16239..17144)
DNA (906bp) protein (302aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZAI4_9ACTO
dihydrodipicolinate synthase
L2_021_000G1_scaffold_423_17
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17239..17781)
DNA (543bp) protein (181aa)
Acetyltransferase, GNAT family n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BD66_9ACTO
Acetyltransferase (GNAT) domain protein {ECO:0000313|EMBL:EWC98523.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
L2_021_000G1_scaffold_423_18
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17778..18518)
DNA (741bp) protein (247aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Actinomyces sp. ICM39 RepID=J2YSA5_9ACTO
dihydrodipicolinate reductase
L2_021_000G1_scaffold_423_19
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18618..19922)
DNA (1305bp) protein (435aa)
Peptidase, M16 family {ECO:0000313|EMBL:EWC98565.1}; EC=3.4.24.- {ECO:0000313|EMBL:EWC98565.1};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
processing peptidase (EC:3.4.24.64)
Peptidase, M16 family n=1 Tax=Actinomyces sp. ICM39 RepID=J3J5S2_9ACTO
L2_021_000G1_scaffold_423_20
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20056..22401)
DNA (2346bp) protein (782aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274805}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274803};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
pnp; polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BD69_9ACTO
L2_021_000G1_scaffold_423_21
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(22586..22855)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=4 Tax=Actinobacteria RepID=J1LR91_9ACTO
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
30S ribosomal protein S15
L2_021_000G1_scaffold_423_22
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23097..24086)
DNA (990bp) protein (330aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
Riboflavin biosynthesis protein RibF n=2 Tax=Actinomyces odontolyticus RepID=A7BD71_9ACTO
riboflavin biosynthesis protein RibF
L2_021_000G1_scaffold_423_23
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24097..25149)
DNA (1053bp) protein (351aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
tRNA pseudouridine synthase B n=1 Tax=Actinomyces sp. ICM39 RepID=J3J5Z5_9ACTO
tRNA pseudouridine synthase B
L2_021_000G1_scaffold_423_24
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25155..25607)
DNA (453bp) protein (151aa)
Ribosome-binding factor A n=2 Tax=Actinomyces odontolyticus RepID=A7BD73_9ACTO
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
ribosome-binding factor A
L2_021_000G1_scaffold_423_25
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25707..28499)
DNA (2793bp) protein (931aa)
Translation initiation factor IF-2 n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A564_9ACTO
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
translation initiation factor IF-2
L2_021_000G1_scaffold_423_26
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28968..29996)
DNA (1029bp) protein (343aa)
Transcription termination factor NusA n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U0I5_9ACTO
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
NusA antitermination factor
L2_021_000G1_scaffold_423_27
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30003..30425)
DNA (423bp) protein (141aa)
Ribosome maturation factor RimP n=1 Tax=Actinomyces sp. ICM39 RepID=J3EFF8_9ACTO
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
hypothetical protein
L2_021_000G1_scaffold_423_28
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30467..31549
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Atopobium sp. ICM58 RepID=J2YWA8_9ACTN
Putative lipoprotein {ECO:0000313|EMBL:EWC98554.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
hypothetical protein
L2_021_000G1_scaffold_423_29
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31637..32686)
DNA (1050bp) protein (350aa)
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Actinomyces sp. ICM39 RepID=J2ZA53_9ACTO
Putative 3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:EWC98530.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
L2_021_000G1_scaffold_423_30
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32829..35087)
DNA (2259bp) protein (753aa)
exo-alpha-sialidase (EC:3.2.1.18)
Exo-alpha-sialidase family protein n=1 Tax=Actinomyces sp. ICM39 RepID=J2YNT1_9ACTO
Exo-alpha-sialidase family protein {ECO:0000313|EMBL:EJN45512.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
Displaying items 1-30 of 37 in total

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