ggKbase home page

L2_021_000G1_scaffold_1781

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_1781_1
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..139)
DNA (138bp) protein (46aa)
Mg chelatase-like protein n=1 Tax=Actinomyces sp. ICM39 RepID=J3J5I2_9ACTO
Mg chelatase-like protein {ECO:0000313|EMBL:EJN46293.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
comM; Mg chelatase-like protein
L2_021_000G1_scaffold_1781_2
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(136..576)
DNA (441bp) protein (147aa)
UPF0102 protein HMPREF0970_00879 n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TY56_9ACTO
UPF0102 protein HMPREF0970_00879 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
hypothetical protein
L2_021_000G1_scaffold_1781_3
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(704..1003)
DNA (300bp) protein (100aa)
Uncharacterized protein n=3 Tax=Actinomyces RepID=D4TY55_9ACTO
PF10611 family protein {ECO:0000313|EMBL:EJN46281.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
hypothetical protein
L2_021_000G1_scaffold_1781_4
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1058..1729)
DNA (672bp) protein (224aa)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
Ribonuclease H (EC:3.1.26.4)
Ribonuclease n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDE6_9ACTO
L2_021_000G1_scaffold_1781_5
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1726..2472)
DNA (747bp) protein (249aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
Signal peptidase I n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z7C7_9ACTO
signal peptidase I
L2_021_000G1_scaffold_1781_6
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(2583..2939)
DNA (357bp) protein (119aa)
50S ribosomal protein L19 n=2 Tax=Actinomyces odontolyticus RepID=A7BDE8_9ACTO
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
50S ribosomal protein L19
L2_021_000G1_scaffold_1781_7
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3112..4464)
DNA (1353bp) protein (451aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|SAAS:SAAS00014918}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|SAAS:SAAS00014917};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Actinomyces sp. oral taxon 172 str. F0311 RepID=U1R0N2_9ACTO
tRNA (guanine-N(1)-)-methyltransferase
L2_021_000G1_scaffold_1781_8
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4469..4981)
DNA (513bp) protein (171aa)
Ribosome maturation factor RimM n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDF0_9ACTO
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
16S rRNA-processing protein RimM
L2_021_000G1_scaffold_1781_9
Actinomyces sp. ICM47, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5071..5310)
DNA (240bp) protein (80aa)
UPF0109 protein ACTODO_01692 n=6 Tax=Actinobacteria RepID=A7BDF1_9ACTO
UPF0109 protein HMPREF1136_0643 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=936548 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM47.;"
KH domain-containing protein
L2_021_000G1_scaffold_1781_10
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(5313..5780)
DNA (468bp) protein (156aa)
30S ribosomal protein S16 n=1 Tax=Actinomyces sp. ICM39 RepID=J3EGN8_9ACTO
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
30S ribosomal protein S16
L2_021_000G1_scaffold_1781_11
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5997..7103)
DNA (1107bp) protein (369aa)
Amidohydrolase family protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TY47_9ACTO
Amidohydrolase family protein {ECO:0000313|EMBL:EWC96217.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
amidohydrolase
L2_021_000G1_scaffold_1781_12
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(7107..8690)
DNA (1584bp) protein (528aa)
Signal recognition particle protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TY46_9ACTO
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
signal recognition particle subunit SRP54
L2_021_000G1_scaffold_1781_13
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8793..10034)
DNA (1242bp) protein (414aa)
Signal recognition particle receptor FtsY n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDF5_9ACTO
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
cell division protein FtsY
L2_021_000G1_scaffold_1781_14
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10093..10491)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDF6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EDN81230.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
L2_021_000G1_scaffold_1781_15
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10618..12249)
DNA (1632bp) protein (544aa)
RNA polymerase sigma factor SigA n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TY43_9ACTO
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
RNA polymerase sigma 70
L2_021_000G1_scaffold_1781_16
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12396..13499
DNA (1104bp) protein (368aa)
Polyprenyl synthetase n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TY42_9ACTO
Polyprenyl synthetase {ECO:0000313|EMBL:EWC96268.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
polyprenyl synthetase
L2_021_000G1_scaffold_1781_17
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13515..13868)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZEB1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD72685.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
L2_021_000G1_scaffold_1781_18
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13952..15895
DNA (1944bp) protein (648aa)
serine/threonine protein kinase with PASTA sensor(s) (EC:2.7.11.25)
Kinase domain protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDG0_9ACTO
PASTA domain protein {ECO:0000313|EMBL:EWC96249.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
L2_021_000G1_scaffold_1781_19
unknown

Not on your lists

15970..16284
DNA (315bp) protein (105aa)

This feature has no annotations

L2_021_000G1_scaffold_1781_20
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

comp(16134..16916)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037B76D1
Uncharacterized protein {ECO:0000313|EMBL:CCX40810.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
C-5 cytosine-specific DNA methylase
Displaying 20 items

View Taxonomy