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L2_021_036G1_scaffold_26

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Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_036G1_scaffold_26_1
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(322..1512)
DNA (1191bp) protein (397aa)
Elongation factor Tu n=51 Tax=Lactobacillus casei group RepID=EFTU_LACC3
translation elongation factor
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L2_021_036G1_scaffold_26_2
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1723..2634)
DNA (912bp) protein (304aa)
BS_ysoA related protein with TPR repeats n=48 Tax=Lactobacillus casei group RepID=B3WE37_LACCB
BS_ysoA related protein with TPR repeats
TPR repeat-containing protein like ysoA {ECO:0000313|EMBL:EPC90869.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L2_021_036G1_scaffold_26_3
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2721..4403)
DNA (1683bp) protein (561aa)
Predicted hydrolase of the metallo-beta-lactamase superfamily n=36 Tax=Lactobacillus casei group RepID=B3WE36_LACCB
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:EPC51311.1}; TaxID=1256202 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei CNCM I-4270.;"
Metallo-beta-lactamase superfamily protein
L2_021_036G1_scaffold_26_4
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4579..5274)
DNA (696bp) protein (232aa)
Uncharacterized protein n=2 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2MRL5_LACPA
Uncharacterized protein {ECO:0000313|EMBL:EPC60322.1}; TaxID=1256204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp14.;"
hypothetical protein
L2_021_036G1_scaffold_26_5
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(5466..5735)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=54 Tax=Lactobacillus casei group RepID=RS15_LACC3
SSU ribosomal protein S15p
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1051652 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 32G.;"
L2_021_036G1_scaffold_26_6
unknown

Not on your lists

5845..5958
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Lactobacillus casei (strain LC2W) RepID=F2MCL5_LACCC
hypothetical protein
L2_021_036G1_scaffold_26_7
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


5983..6237
DNA (255bp) protein (85aa)
30S ribosomal protein S20 n=55 Tax=Lactobacillus casei group RepID=RS20_LACC3
SSU ribosomal protein S20p
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1256200 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp7.;"
L2_021_036G1_scaffold_26_8
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6328..7371)
DNA (1044bp) protein (348aa)
DNA polymerase III, delta subunit {ECO:0000313|EMBL:ABJ70107.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABJ70107.1};; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
DNA-directed DNA polymerase III, delta chain n=17 Tax=Lactobacillus casei group RepID=B3WE32_LACCB
DNA polymerase III subunit delta
L2_021_036G1_scaffold_26_9
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7358..9550)
DNA (2193bp) protein (731aa)
Late competence protein ComEC, DNA transport n=2 Tax=Lactobacillus casei group RepID=S4ZLQ5_LACCA
Late competence protein ComEC, DNA transport {ECO:0000313|EMBL:AGP68201.1}; TaxID=1318635 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei LOCK919.;"
Late competence protein ComEC, DNA transport
L2_021_036G1_scaffold_26_10
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9547..10230)
DNA (684bp) protein (228aa)
Transporter n=4 Tax=Lactobacillus casei RepID=U6SEV0_LACCA
DNA uptake protein-like DNA-binding protein {ECO:0000313|EMBL:EPC59828.1}; TaxID=1256204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp14.;"
DNA uptake protein-like DNA-binding protein
L2_021_036G1_scaffold_26_11
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10344..11426)
DNA (1083bp) protein (361aa)
Protease n=15 Tax=Lactobacillus casei group RepID=S6C4M9_LACPA
peptidase S16
Protease {ECO:0000313|EMBL:BAN71547.1}; TaxID=1226298 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei JCM 8130.;"
L2_021_036G1_scaffold_26_12
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11404..11907)
DNA (504bp) protein (168aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1256208 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp41.;"
Phosphopantetheine adenylyltransferase n=20 Tax=Lactobacillus casei group RepID=COAD_LACC3
phosphopantetheine adenylyltransferase
L2_021_036G1_scaffold_26_13
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11900..12466)
DNA (567bp) protein (189aa)
ylbH; rRNA methyltransferase ylbH (EC:2.1.1.-)
N6-adenine-specific methylase n=38 Tax=Lactobacillus casei group RepID=C5F5U8_LACPA
Uncharacterized protein {ECO:0000313|EMBL:EPC87197.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L2_021_036G1_scaffold_26_14
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12453..12809)
DNA (357bp) protein (119aa)
Uncharacterized protein n=3 Tax=Lactobacillus casei group RepID=D8GGD8_LACCZ
hypothetical protein
UPF0298 protein N422_04635 {ECO:0000256|HAMAP-Rule:MF_01126}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
L2_021_036G1_scaffold_26_15
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12827..16264)
DNA (3438bp) protein (1146aa)
pyruvate carboxyl transferase (EC:6.-.-.- 6.4.1.1)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=1256198 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp70.;"
Pyruvate carboxylase n=1 Tax=Lactobacillus casei 12A RepID=K6QRW0_LACCA
L2_021_036G1_scaffold_26_16
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16257..17426)
DNA (1170bp) protein (390aa)
Cell division protein n=41 Tax=Lactobacillus casei group RepID=B3WE24_LACCB
FtsW family cell division protein
FtsW family cell division protein {ECO:0000313|EMBL:EKQ03185.1}; TaxID=1051651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 21/1.;"
L2_021_036G1_scaffold_26_17
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17666..19510)
DNA (1845bp) protein (615aa)
GTP-binding protein-BipA-EF-TU family n=56 Tax=Lactobacillus casei group RepID=B3WE23_LACCB
Uncharacterized protein {ECO:0000313|EMBL:EPC53400.1}; TaxID=1256201 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp123.;"
GTP-binding protein TypA/BipA
L2_021_036G1_scaffold_26_18
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19769..20560)
DNA (792bp) protein (264aa)
Myo-inositol-1(Or 4)-monophosphatase n=44 Tax=Lactobacillus casei group RepID=B3WE22_LACCB
Inositol-1-monophosphatase
Archaeal fructose-1,6-bisphosphatase related enzyme of inositol monophosphatase family protein {ECO:0000313|EMBL:EPC87202.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L2_021_036G1_scaffold_26_19
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20563..20844)
DNA (282bp) protein (94aa)
Uncharacterized protein n=52 Tax=Lactobacillus casei group RepID=C5F5V4_LACPA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKQ12518.1}; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
L2_021_036G1_scaffold_26_20
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20834..21724)
DNA (891bp) protein (297aa)
L-lactate dehydrogenase (L-LDH) n=37 Tax=Lactobacillus casei group RepID=B3WE20_LACCB
L-lactate dehydrogenase
Lactate dehydrogenase {ECO:0000313|EMBL:ERN49837.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
L2_021_036G1_scaffold_26_21
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21961..23364)
DNA (1404bp) protein (468aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
Dihydrolipoyl dehydrogenase n=19 Tax=Lactobacillus casei group RepID=C5F2Q8_LACPA
dihydrolipoyl dehydrogenase
L2_021_036G1_scaffold_26_22
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23367..25022)
DNA (1656bp) protein (552aa)
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000313|EMBL:EKQ19686.1}; EC=2.3.1.12 {ECO:0000313|EMBL:EKQ19686.1};; TaxID=1051659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UCD174.;"
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Lactobacillus casei UCD174 RepID=K6RG15_LACCA
dihydrolipoamide acetyltransferase
L2_021_036G1_scaffold_26_23
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25040..26017)
DNA (978bp) protein (326aa)
Pyruvate dehydrogenase E1 component beta subunit {ECO:0000313|EMBL:EKQ19685.1}; EC=1.2.4.1 {ECO:0000313|EMBL:EKQ19685.1};; TaxID=1051659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UCD174.;"
Pyruvate dehydrogenase complex, E1 component, beta subunit n=45 Tax=Lactobacillus casei group RepID=B3WE17_LACCB
Pyruvate dehydrogenase E1 component beta subunit
L2_021_036G1_scaffold_26_24
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26020..27132)
DNA (1113bp) protein (371aa)
Pyruvate dehydrogenase E1 component alpha subunit {ECO:0000313|EMBL:EKQ12513.1}; EC=1.2.4.- {ECO:0000313|EMBL:EKQ12513.1};; EC=1.2.4.1 {ECO:0000313|EMBL:EKQ12513.1};; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
Pyruvate dehydrogenase complex, E1 component, alpha subunit n=55 Tax=Lactobacillus casei group RepID=B3WE16_LACCB
Pyruvate dehydrogenase E1 component alpha subunit
L2_021_036G1_scaffold_26_25
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27393..28208)
DNA (816bp) protein (272aa)
HAD superfamily P-type transporting ATPase {ECO:0000313|EMBL:EKQ12512.1}; EC=3.6.3.- {ECO:0000313|EMBL:EKQ12512.1};; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
Uncharacterized protein n=41 Tax=Lactobacillus casei group RepID=F2MCJ6_LACCC
hypothetical protein
L2_021_036G1_scaffold_26_26
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28981..29535
DNA (555bp) protein (185aa)
peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1435040 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 1981.;"
Peptide deformylase n=50 Tax=Lactobacillus casei group RepID=DEF_LACC3
L2_021_036G1_scaffold_26_27
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29599..29892)
DNA (294bp) protein (98aa)
Uncharacterized protein n=20 Tax=Lactobacillus casei group RepID=C5F2R5_LACPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERN49830.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
L2_021_036G1_scaffold_26_28
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29923..30372)
DNA (450bp) protein (150aa)
Uncharacterized protein n=42 Tax=Lactobacillus casei group RepID=C5F2R6_LACPA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC87212.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L2_021_036G1_scaffold_26_29
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30993..31205
DNA (213bp) protein (71aa)
UPF0356 protein LSEI_1299 n=55 Tax=Lactobacillus casei group RepID=Y1299_LACC3
Protein of unknown function DUF1447
UPF0356 protein Lpp74_11294 {ECO:0000256|HAMAP-Rule:MF_01553}; TaxID=1256199 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp74.;"
L2_021_036G1_scaffold_26_30
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31210..32892
DNA (1683bp) protein (561aa)
rnjA; ribonuclease J 1 (EC:3.1.-.-)
mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme n=42 Tax=Lactobacillus casei group RepID=B3WE09_LACCB
mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme {ECO:0000313|EMBL:EPC15827.1}; TaxID=1256230 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. tolerans Lpl7.;"
Displaying items 1-30 of 81 in total

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