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L2_021_036G1_scaffold_412

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_036G1_scaffold_412_1
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3..428)
DNA (426bp) protein (142aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00173448};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
Proline--tRNA ligase n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BME0_VEIPT
prolyl-tRNA synthetase
L2_021_036G1_scaffold_412_2
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(422..1507)
DNA (1086bp) protein (362aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=6 Tax=Veillonella RepID=D1BMD9_VEIPT
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
L2_021_036G1_scaffold_412_3
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1526..2542)
DNA (1017bp) protein (339aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
Membrane-associated zinc metalloprotease n=3 Tax=Veillonella RepID=D1BMD8_VEIPT
membrane-associated zinc metalloprotease
L2_021_036G1_scaffold_412_4
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2551..3696)
DNA (1146bp) protein (382aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BMD7_VEIPT
1-deoxy-D-xylulose 5-phosphate reductoisomerase
L2_021_036G1_scaffold_412_5
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3715..4539)
DNA (825bp) protein (275aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
Phosphatidate cytidylyltransferase n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BMD6_VEIPT
phosphatidate cytidylyltransferase
L2_021_036G1_scaffold_412_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(4543..5307)
DNA (765bp) protein (255aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
Isoprenyl transferase n=2 Tax=Veillonella RepID=D1BMD5_VEIPT
UDP diphosphate synthase
L2_021_036G1_scaffold_412_7
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(5288..5539)
DNA (252bp) protein (84aa)
Uncharacterized protein n=4 Tax=Veillonella RepID=D1BMD4_VEIPT
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFG23605.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
L2_021_036G1_scaffold_412_8
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(5539..6099)
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=2 Tax=Veillonella RepID=D1BMD3_VEIPT
ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
L2_021_036G1_scaffold_412_9
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6105..6830)
DNA (726bp) protein (242aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
Uridylate kinase n=2 Tax=Veillonella RepID=D1BMD2_VEIPT
uridylate kinase
L2_021_036G1_scaffold_412_10
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(6893..7573)
DNA (681bp) protein (227aa)
Elongation factor Ts n=5 Tax=Veillonella RepID=D1BMD1_VEIPT
translation elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
L2_021_036G1_scaffold_412_11
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(7672..8424)
DNA (753bp) protein (251aa)
30S ribosomal protein S2 n=4 Tax=Veillonella RepID=D1YR20_9FIRM
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
30S ribosomal protein S2
L2_021_036G1_scaffold_412_12
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8678..9328)
DNA (651bp) protein (217aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
Ribulose-phosphate 3-epimerase n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BMC9_VEIPT
ribulose-phosphate 3-epimerase
L2_021_036G1_scaffold_412_13
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9330..9623)
DNA (294bp) protein (98aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BMC8_VEIPT
ribosome small subunit-dependent GTPase A
Displaying 13 items

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