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L2_021_061G1_scaffold_89

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_061G1_scaffold_89_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..279)
DNA (279bp) protein (93aa)
Sucrose phosphorylase n=3 Tax=Bifidobacterium longum RepID=I3B3J6_BIFLN
spl; sucrose phosphorylase
Sucrose phosphorylase {ECO:0000313|EMBL:AAN24362.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_021_061G1_scaffold_89_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

711..935
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E9I8_BIFLI
putative transposase
Transposase {ECO:0000313|EMBL:ACD98781.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_021_061G1_scaffold_89_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

973..1980
DNA (1008bp) protein (336aa)
Glycosyl hydrolase, family 31 n=2 Tax=Bifidobacterium longum RepID=V6XTV2_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EEI79934.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
truncated alpha-glucosidase
L2_021_061G1_scaffold_89_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2066..3100)
DNA (1035bp) protein (345aa)
Transcriptional regulator n=6 Tax=Bifidobacterium RepID=E8MG69_BIFL2
transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:KEY23958.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_021_061G1_scaffold_89_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3272..4819)
DNA (1548bp) protein (516aa)
Alpha-L-arabinosidase n=9 Tax=Bacteria RepID=F8AUI5_BIFLN
abfA1; alpha-L-arabinofuranosidase
Alpha-L-arabinofuranosidase {ECO:0000313|EMBL:KEY23959.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_021_061G1_scaffold_89_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5236..6939)
DNA (1704bp) protein (568aa)
Potassium transporter n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E9J2_BIFLI
Potassium transporter {ECO:0000313|EMBL:EEQ54601.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
potassium transporter Kup
L2_021_061G1_scaffold_89_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7229..8314)
DNA (1086bp) protein (362aa)
Transcriptional regulator, LacI family n=13 Tax=Bifidobacterium RepID=D6DAR7_BIFLN
transcriptional regulator
LacI-type transcriptional regulator {ECO:0000313|EMBL:AAN24370.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_021_061G1_scaffold_89_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8589..8984)
DNA (396bp) protein (132aa)
CrcB protein n=7 Tax=Bifidobacterium RepID=V6XYR8_BIFLN
camphor resistance CrcB protein
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_021_061G1_scaffold_89_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8984..10216)
DNA (1233bp) protein (411aa)
Integral membrane protein for chromosome condensation n=5 Tax=Bifidobacterium RepID=B3DNT1_BIFLD
Integral membrane protein possibly involved in chromosome condensation
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L2_021_061G1_scaffold_89_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10244..11758)
DNA (1515bp) protein (505aa)
Voltage gated channel protein n=3 Tax=Bifidobacterium longum RepID=F8AUJ1_BIFLN
voltage gated channel protein
Putative voltage gated channel protein {ECO:0000313|EMBL:BAJ70229.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_021_061G1_scaffold_89_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11851..13137)
DNA (1287bp) protein (429aa)
Adenylosuccinate synthetase {ECO:0000255|HAMAP-Rule:MF_00011}; Short=AMPSase {ECO:0000255|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000255|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000255|HAMAP-Rule:MF_00011};; IMP--aspartate ligase {ECO:0000255|HAMAP-Rule:MF_00011}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
Adenylosuccinate synthetase n=2 Tax=Bifidobacterium longum RepID=PURA_BIFLS
adenylosuccinate synthase
L2_021_061G1_scaffold_89_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13354..14421
DNA (1068bp) protein (356aa)
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:CBK71274.1}; EC=4.1.2.13 {ECO:0000313|EMBL:CBK71274.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Fructose-bisphosphate aldolase n=2 Tax=Bifidobacterium longum subsp. longum RepID=D6DAS1_BIFLN
fructose-bisphosphate aldolase
L2_021_061G1_scaffold_89_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14631..15569)
DNA (939bp) protein (313aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Protease HtpX homolog n=6 Tax=Bifidobacterium longum RepID=B3DNT5_BIFLD
htpX; heat shock protein htpX
L2_021_061G1_scaffold_89_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15744..17183)
DNA (1440bp) protein (480aa)
Ferredoxin--NADP(+) reductase n=2 Tax=Bifidobacterium longum RepID=S3EN47_BIFLN
ferredoxin/ferredoxin-NADP reductase
Putative ferredoxin/ferredoxin-NADP reductase {ECO:0000313|EMBL:BAJ65762.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_021_061G1_scaffold_89_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17398..18168
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G6T5_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24377.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_021_061G1_scaffold_89_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18508..20628)
DNA (2121bp) protein (707aa)
ATPase, P-type (Transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DAS8_BIFLN
ATPase, P-type (Transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase {ECO:0000313|EMBL:CBK71281.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase
L2_021_061G1_scaffold_89_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21040..23052)
DNA (2013bp) protein (671aa)
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain (EC:3.4.21.-)
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain {ECO:0000313|EMBL:CBK71282.1}; EC=3.4.21.- {ECO:0000313|EMBL:CBK71282.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DAS9_BIFLN
L2_021_061G1_scaffold_89_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23469..24782
DNA (1314bp) protein (438aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Queuine tRNA-ribosyltransferase n=6 Tax=Bifidobacterium RepID=B3DNU0_BIFLD
queuine tRNA-ribosyltransferase
L2_021_061G1_scaffold_89_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25689..25925
DNA (237bp) protein (79aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=V6XTZ5_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44446.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_061G1_scaffold_89_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26065..26886
DNA (822bp) protein (274aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C2GXT7_BIFLN
hemolysin III
Hemolysin III {ECO:0000313|EMBL:AIW43144.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_061G1_scaffold_89_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26948..27280)
DNA (333bp) protein (111aa)
UPF0145 protein BLD_1357 n=16 Tax=Bifidobacterium RepID=Y1357_BIFLD
hypothetical protein
UPF0145 protein BLIG_00571 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L2_021_061G1_scaffold_89_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27338..29062)
DNA (1725bp) protein (575aa)
PF03235 family protein n=3 Tax=Bifidobacterium RepID=I3B522_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:AIW44444.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
hypothetical protein
L2_021_061G1_scaffold_89_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29133..30041)
DNA (909bp) protein (303aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EIJ26642.1}; EC=2.4.-.- {ECO:0000313|EMBL:EIJ26642.1};; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Glycosyltransferase, group 2 family protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B528_BIFLN
glycosyl transferase family A
L2_021_061G1_scaffold_89_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30242..31303
DNA (1062bp) protein (354aa)
Fic/DOC family protein n=3 Tax=Bifidobacterium RepID=E5Y0L8_9BIFI
cell division protein Fic
Fic/DOC family protein {ECO:0000313|EMBL:EIJ26678.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_021_061G1_scaffold_89_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31344..31985)
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5Y0L9_9BIFI
flavin-nucleotide-binding protein
Flavin-nucleotide-binding protein {ECO:0000313|EMBL:AIW44442.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_061G1_scaffold_89_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31982..32956)
DNA (975bp) protein (325aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Peptide methionine sulfoxide reductase MsrA/MsrB n=1 Tax=Bifidobacterium longum E18 RepID=V6XTY9_BIFLN
methionine sulfoxide reductase
L2_021_061G1_scaffold_89_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33552..36125)
DNA (2574bp) protein (858aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8AUK8_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:BAP82735.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
hypothetical protein
L2_021_061G1_scaffold_89_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36122..37477)
DNA (1356bp) protein (452aa)
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:EIJ26687.1}; EC=3.4.-.- {ECO:0000313|EMBL:EIJ26687.1};; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Peptidase, S9A/B/C family, catalytic domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B551_BIFLN
hypothetical protein
L2_021_061G1_scaffold_89_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37738..38196
DNA (459bp) protein (153aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=C2GXU8_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EEI79965.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
hypothetical protein
L2_021_061G1_scaffold_89_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38364..39320)
DNA (957bp) protein (319aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=R5NCY6_9BIFI
hypothetical protein
Putative inner membrane protein YddG {ECO:0000313|EMBL:EIJ26676.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Displaying items 1-30 of 35 in total

View Taxonomy