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L2_021_096G1_scaffold_30

Search features with annotation key words

Displaying items 1-30 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_096G1_scaffold_30_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

437..1192
DNA (756bp) protein (252aa)
NAD-dependent protein deacetylase n=13 Tax=Bifidobacterium RepID=B3DP85_BIFLD
nad-dependent protein deacetylase
Transcriptional regulator {ECO:0000313|EMBL:AEI98541.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_021_096G1_scaffold_30_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1338..2603)
DNA (1266bp) protein (422aa)
Threonine ammonia-lyase {ECO:0000313|EMBL:EIJ23258.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EIJ23258.1};; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Threonine dehydratase n=14 Tax=Bifidobacterium RepID=B3DP84_BIFLD
ilvA; ilva
L2_021_096G1_scaffold_30_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2871..4691)
DNA (1821bp) protein (607aa)
Oligo-1,6-glucosidase {ECO:0000313|EMBL:CCK33899.1}; EC=3.2.1.10 {ECO:0000313|EMBL:CCK33899.1};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Alpha amylase, catalytic domain protein n=8 Tax=Bifidobacterium longum RepID=C5E9S8_BIFLI
alpha-amylase
L2_021_096G1_scaffold_30_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4936..5547
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E9S7_BIFLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEQ54771.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L2_021_096G1_scaffold_30_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6107..6973)
DNA (867bp) protein (289aa)
Sugar permease of ABC transporter system n=2 Tax=Bifidobacterium longum subsp. longum RepID=D6ZX09_BIFLJ
sugar ABC transporter permease
Sugar permease of ABC transporter system {ECO:0000313|EMBL:ADH01415.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_021_096G1_scaffold_30_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6992..7921)
DNA (930bp) protein (310aa)
Sugar permease of ABC transporter system n=2 Tax=Bifidobacterium longum subsp. longum RepID=D6ZX10_BIFLJ
sugar ABC transporter permease
Sugar permease of ABC transporter system {ECO:0000313|EMBL:ADH01416.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_021_096G1_scaffold_30_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7943..9232)
DNA (1290bp) protein (430aa)
Extracellular solute-binding protein, family 1 n=2 Tax=Bifidobacterium longum subsp. longum RepID=D6ZX11_BIFLJ
ABC transporter substrate-binding protein
Extracellular solute-binding protein, family 1 {ECO:0000313|EMBL:ADH01417.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_021_096G1_scaffold_30_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9408..10616
DNA (1209bp) protein (403aa)
ROK family protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX12_BIFLJ
ROK family protein
ROK family protein {ECO:0000313|EMBL:ADH01418.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_021_096G1_scaffold_30_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10781..13087)
DNA (2307bp) protein (769aa)
Glycoside hydrolase, clan GH-D n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX13_BIFLJ
glycoside hydrolase
Glycoside hydrolase, clan GH-D {ECO:0000313|EMBL:ADH01419.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_021_096G1_scaffold_30_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13207..13731)
DNA (525bp) protein (175aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
CMP/dCMP deaminase, zinc-binding protein n=10 Tax=Bifidobacterium RepID=D6ZX14_BIFLJ
CMP/dCMP deaminase
L2_021_096G1_scaffold_30_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13782..15854
DNA (2073bp) protein (691aa)
Sodium/hydrogen exchanger n=2 Tax=Bifidobacterium longum subsp. longum RepID=D6ZX15_BIFLJ
Sodium/hydrogen exchanger {ECO:0000313|EMBL:AEI98522.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
sodium/hydrogen exchanger
L2_021_096G1_scaffold_30_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16048..16806)
DNA (759bp) protein (253aa)
Phospholipase/Carboxylesterase n=3 Tax=Bifidobacterium RepID=D6ZX16_BIFLJ
phospholipase/carboxylesterase
Esterase {ECO:0000313|EMBL:KEY24096.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_021_096G1_scaffold_30_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16925..17785)
DNA (861bp) protein (287aa)
Uncharacterized protein n=6 Tax=Bifidobacterium longum RepID=Q8G477_BIFLO
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ67554.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_021_096G1_scaffold_30_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18142..18723
DNA (582bp) protein (194aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146, ECO:0000313|EMBL:CBK71390.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Deoxycytidine triphosphate deaminase n=18 Tax=Bifidobacterium RepID=DCD_BIFLD
deoxycytidine triphosphate deaminase
L2_021_096G1_scaffold_30_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18786..20564
DNA (1779bp) protein (593aa)
Uncharacterized protein n=3 Tax=Bifidobacterium longum subsp. longum RepID=C2GWS0_BIFLN
hypothetical protein
Sugar-binding domain protein {ECO:0000313|EMBL:EIJ26384.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_021_096G1_scaffold_30_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20801..23788)
DNA (2988bp) protein (996aa)
Cation transport ATPase n=7 Tax=Bacteria RepID=D6DB35_BIFLN
Cation transport ATPase
Cation-transporting ATPase PacL {ECO:0000313|EMBL:AAN24504.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_021_096G1_scaffold_30_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23971..24801)
DNA (831bp) protein (277aa)
Esterase/lipase n=8 Tax=Bifidobacterium RepID=B3DP61_BIFLD
Acetyl esterase {ECO:0000313|EMBL:KEY33242.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
xylan esterase
L2_021_096G1_scaffold_30_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24880..26178)
DNA (1299bp) protein (433aa)
Transport protein n=5 Tax=Bifidobacterium RepID=E8MFT2_BIFL2
transport protein
Transport protein {ECO:0000313|EMBL:BAJ67559.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_021_096G1_scaffold_30_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26266..27258
DNA (993bp) protein (331aa)
rRNA methylase n=17 Tax=Bifidobacterium RepID=B3DP59_BIFLD
RNA methyltransferase
RNA methyltransferase {ECO:0000313|EMBL:KEY24089.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_021_096G1_scaffold_30_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27365..28762)
DNA (1398bp) protein (466aa)
Lipopolysaccharide kinase (Kdo/WaaP) family n=10 Tax=Bacteria RepID=D6DB32_BIFLN
Lipopolysaccharide kinase {ECO:0000313|EMBL:BAP84509.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
Lipopolysaccharide kinase (Kdo/WaaP) family.
L2_021_096G1_scaffold_30_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28871..29326)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DB31_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK71384.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L2_021_096G1_scaffold_30_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29323..30114)
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MWE4_BIFL1
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ72088.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_021_096G1_scaffold_30_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30098..31081)
DNA (984bp) protein (328aa)
Sortase n=4 Tax=Bifidobacterium longum RepID=B3DP55_BIFLD
srtA4; sortase
Sortase {ECO:0000313|EMBL:ACD98914.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_021_096G1_scaffold_30_24
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31162..32820)
DNA (1659bp) protein (553aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRE0_9BIFI
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EEG71234.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
cell surface protein with gram positive anchor and Cna protein B-type domains
L2_021_096G1_scaffold_30_25
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32810..40507)
DNA (7698bp) protein (2566aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRE1_9BIFI
Cell surface protein {ECO:0000313|EMBL:KEF27914.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
cell surface protein with LPXTG anchor
L2_021_096G1_scaffold_30_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41290..42417)
DNA (1128bp) protein (376aa)
Sugar ABC transporter ATPase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8APH8_BIFLN
malK; sugar ABC transporter ATPase
Sugar ABC transporter ATPase {ECO:0000313|EMBL:AEI98508.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_021_096G1_scaffold_30_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42776..43951)
DNA (1176bp) protein (392aa)
Glycosyltransferase like protein n=2 Tax=Bifidobacterium longum RepID=S3DRX3_BIFLN
glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:BAJ67567.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_021_096G1_scaffold_30_28
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(44015..45007)
DNA (993bp) protein (331aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Ribonucleoside-diphosphate reductase subunit beta n=12 Tax=Bifidobacterium RepID=D6DB25_BIFLN
ribonucleotide-diphosphate reductase subunit beta
L2_021_096G1_scaffold_30_29
unknown

Not on your lists

comp(45023..45112)
DNA (90bp) protein (30aa)

This feature has no annotations

L2_021_096G1_scaffold_30_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(45233..47428)
DNA (2196bp) protein (732aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Ribonucleoside-diphosphate reductase subunit alpha n=1 Tax=Bifidobacterium longum E18 RepID=V6Y3H6_BIFLN
ribonucleoside-diphosphate reductase subunit alpha
Displaying items 1-30 of 113 in total

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