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L2_021_096G1_scaffold_48

Search features with annotation key words

Displaying items 1-30 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_096G1_scaffold_48_1
unknown

Not on your lists

comp(101..256)
DNA (156bp) protein (52aa)

This feature has no annotations

L2_021_096G1_scaffold_48_2
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(257..637)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0002EC0798
Transcriptional regulator {ECO:0000313|EMBL:AJG97609.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
hypothetical protein
L2_021_096G1_scaffold_48_3
Listeriaceae bacterium FSL A5-0209, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

961..2709
DNA (1749bp) protein (583aa)
ABC transporter, ATP-binding/permease protein n=1 Tax=Listeria monocytogenes SLCC2540 RepID=J7PLC9_LISMN
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGL39100.1}; TaxID=1497679 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae.;" source="Listeriaceae bacterium FSL A5-0209.;"
ABC transporter ATP-binding protein/permease
L2_021_096G1_scaffold_48_4
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2715..4463
DNA (1749bp) protein (583aa)
Multidrug resistance ABC transporter n=1 Tax=Clostridium tetani 12124569 RepID=U6EW88_CLOTA
multidrug resistance ABC transporter
Multidrug resistance ABC transporter {ECO:0000313|EMBL:CDI48485.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
L2_021_096G1_scaffold_48_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4503..5912)
DNA (1410bp) protein (470aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83015.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_021_096G1_scaffold_48_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6008..7933)
DNA (1926bp) protein (642aa)
ABC transporter ATP-binding protein uup n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UTY4_CLOBO
ABC transporter ATP-binding protein uup {ECO:0000313|EMBL:EES48415.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
ABC transporter
L2_021_096G1_scaffold_48_7
unknown

Not on your lists

comp(8041..8415)
DNA (375bp) protein (125aa)

This feature has no annotations

L2_021_096G1_scaffold_48_8
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8487..8780)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TBK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ57278.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_021_096G1_scaffold_48_9
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8837..9256)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KLY4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB74495.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
hypothetical protein
L2_021_096G1_scaffold_48_10
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9350..10771
DNA (1422bp) protein (474aa)
stage V sporulation protein AF n=1 Tax=Clostridium sp. JC122 RepID=UPI000287BE5A
stage V sporulation protein AF
Stage V sporulation protein AF {ECO:0000313|EMBL:CDM68747.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_021_096G1_scaffold_48_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11067..11822)
DNA (756bp) protein (252aa)
exodeoxyribonuclease III (EC:3.1.11.2)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IY22_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41596.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_021_096G1_scaffold_48_12
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12169..13536)
DNA (1368bp) protein (456aa)
UPF0210 protein CCH01_014880 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FNG0_9CLOT
UPF0210 protein CCH01_014880 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein UPF0210
L2_021_096G1_scaffold_48_13
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13552..13821)
DNA (270bp) protein (90aa)
UPF0237 protein CCH01_014890 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ESK4_9CLOT
UPF0237 protein CCH01_014890 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
ACT domain-containing protein
L2_021_096G1_scaffold_48_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13840..14820)
DNA (981bp) protein (327aa)
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:AIY78713.1}; EC=1.4.1.16 {ECO:0000313|EMBL:AIY78713.1};; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
diaminopimelate dehydrogenase (EC:1.4.1.16)
cytochrome C2 n=1 Tax=Clostridium botulinum RepID=UPI00036C5152
L2_021_096G1_scaffold_48_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14981..15925)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q7S5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY24024.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L2_021_096G1_scaffold_48_16
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15970..16638)
DNA (669bp) protein (223aa)
DNA-3-methyladenine glycosylase (EC:3.2.2.-)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
3-methyladenine DNA glycosylase n=1 Tax=Clostridium tetani 12124569 RepID=U6EUJ3_CLOTA
L2_021_096G1_scaffold_48_17
unknown

Not on your lists

comp(16720..16854)
DNA (135bp) protein (45aa)

This feature has no annotations

L2_021_096G1_scaffold_48_18
Bacillus subtilis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16951..17265)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Bacillus atrophaeus UCMB-5137 RepID=R0PML0_BACAT
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:KFK80945.1}; TaxID=1495315 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus subtilis subsp. niger.;"
L2_021_096G1_scaffold_48_19
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17429..17881
DNA (453bp) protein (151aa)
Acetyltransferase family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CVC1_CLOSO
Acetyltransferase {ECO:0000313|EMBL:CEP44584.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
putative FemA-like peptidoglycan biosynthesisprotein
L2_021_096G1_scaffold_48_20
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(17934..18398)
DNA (465bp) protein (155aa)
Putative regulatory protein n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7J8E2_9FUSO
Putative regulatory protein {ECO:0000313|EMBL:CDE60199.1}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
hypothetical protein
L2_021_096G1_scaffold_48_21
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18818..21136)
DNA (2319bp) protein (773aa)
gshAB; glutathione biosynthesis bifunctional protein GshAB (EC:6.3.2.2 6.3.2.3)
Glutathione biosynthesis bifunctional protein GshAB n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TUQ7_9CLOT
Glutathione biosynthesis bifunctional protein GshAB {ECO:0000256|HAMAP-Rule:MF_00782}; Gamma-GCS-GS {ECO:0000256|HAMAP-Rule:MF_00782}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_021_096G1_scaffold_48_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21120..22448)
DNA (1329bp) protein (443aa)
Mate efflux family protein n=2 Tax=Clostridium botulinum B RepID=B2TNJ4_CLOBB
mate efflux family protein
Mate efflux family protein {ECO:0000313|EMBL:ACD23595.1}; Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps {ECO:0000313|EMBL:CDH91515.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_021_096G1_scaffold_48_23
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22461..22736)
DNA (276bp) protein (92aa)
ArsR family transcriptional regulator n=1 Tax=Clostridium tetani 12124569 RepID=U6EZ65_CLOTA
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:CDI50038.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
L2_021_096G1_scaffold_48_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22942..24660)
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3R3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98736.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
myosin-cross-reactive antigen
L2_021_096G1_scaffold_48_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24783..25100
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI000309C487
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD21861.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_021_096G1_scaffold_48_26
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25150..25710)
DNA (561bp) protein (187aa)
p-loop ATPase n=1 Tax=Clostridium sp. CAG:221 RepID=R6G2H8_9CLOT
p-loop ATPase {ECO:0000313|EMBL:CDB15536.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
P-loop ATPase
L2_021_096G1_scaffold_48_27
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25892..26071
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QK63_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28353.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L2_021_096G1_scaffold_48_28
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26143..26568
DNA (426bp) protein (142aa)
Rubrerythrin family protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FZA1_9CLOT
Rubrerythrin family protein {ECO:0000313|EMBL:CDB14411.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
ferritin
L2_021_096G1_scaffold_48_29
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26582..27166)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H331_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97295.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hemerythrin HHE cation binding domain protein
L2_021_096G1_scaffold_48_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27129..27743)
DNA (615bp) protein (205aa)
UPI0003D5CDAA related cluster n=1 Tax=unknown RepID=UPI0003D5CDAA
Uncharacterized protein {ECO:0000313|EMBL:ETI91055.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
Displaying items 1-30 of 119 in total

View Taxonomy