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L2_021_096G1_scaffold_169

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_096G1_scaffold_169_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1907..2788)
DNA (882bp) protein (294aa)
LD-carboxypeptidase family protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TMJ4_CLOP1
LD-carboxypeptidase
LD-carboxypeptidase family protein {ECO:0000313|EMBL:EDT14413.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_021_096G1_scaffold_169_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2880..3824)
DNA (945bp) protein (315aa)
Probable transport protein n=9 Tax=Clostridium perfringens RepID=Q8XHM6_CLOPE
cation transporter
Putative cation transporter {ECO:0000313|EMBL:EIA15970.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_021_096G1_scaffold_169_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4099..4596
DNA (498bp) protein (166aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CZG1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14450.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_021_096G1_scaffold_169_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4625..5794)
DNA (1170bp) protein (390aa)
Amidohydrolase homolog n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TMJ7_CLOP1
amidohydrolase
Uncharacterized protein {ECO:0000313|EMBL:BAB82161.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_096G1_scaffold_169_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5951..6127
DNA (177bp) protein (59aa)
Probable sigma-F transcribed protein n=10 Tax=Clostridium perfringens RepID=Q8XHM9_CLOPE
putative csfB protein
Putative csfB protein {ECO:0000313|EMBL:EDT26017.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_021_096G1_scaffold_169_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6145..7569
DNA (1425bp) protein (475aa)
Orn/Lys/Arg decarboxylase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RJ74_CLOPF
Orn/Lys/Arg decarboxylase {ECO:0000313|EMBL:EDT26016.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Orn/Lys/Arg decarboxylase
L2_021_096G1_scaffold_169_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7822..8412
DNA (591bp) protein (197aa)
Guanylate kinase-like protein n=7 Tax=Clostridium perfringens RepID=H7CZF7_CLOPF
gmk; guanylate kinase
Guanylate kinase-like protein {ECO:0000313|EMBL:EIA15965.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_021_096G1_scaffold_169_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8429..8584
DNA (156bp) protein (52aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CZF6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26018.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_021_096G1_scaffold_169_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8740..9069
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BK44_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS79823.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L2_021_096G1_scaffold_169_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9091..10014
DNA (924bp) protein (308aa)
holB; DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III delta' subunit n=5 Tax=Clostridium perfringens RepID=Q8XHN4_CLOPE
DNA polymerase III delta' subunit {ECO:0000313|EMBL:BAB82155.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_096G1_scaffold_169_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10017..10922
DNA (906bp) protein (302aa)
PSP1 domain-containing protein n=10 Tax=Clostridium perfringens RepID=H7CZF3_CLOPF
PSP1 domain-containing protein
Signal peptidase-like protein {ECO:0000313|EMBL:BAB82154.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_096G1_scaffold_169_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11091..11261
DNA (171bp) protein (57aa)
Ferredoxin n=11 Tax=Clostridium perfringens RepID=FER_CLOPE
ferredoxin (fdxA)
Putative ferredoxin {ECO:0000313|EMBL:ABG86239.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_021_096G1_scaffold_169_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11378..13060
DNA (1683bp) protein (561aa)
Mur ligase family protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TMK6_CLOP1
Mur ligase
Mur ligase family protein {ECO:0000313|EMBL:EDT26000.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_021_096G1_scaffold_169_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13111..13764)
DNA (654bp) protein (218aa)
Putative zinc-dependent hydrolase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BK38_CLOPF
Putative zinc-dependent hydrolase {ECO:0000313|EMBL:EDS79854.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L2_021_096G1_scaffold_169_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13981..14436
DNA (456bp) protein (152aa)
Transcriptional regulator CtsR n=10 Tax=Clostridium perfringens RepID=H7CZE9_CLOPF
transcriptional repressor
Transcriptional repressor of class III stress genes {ECO:0000313|EMBL:BAB82150.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_096G1_scaffold_169_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14456..14983
DNA (528bp) protein (176aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BK36_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS79850.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L2_021_096G1_scaffold_169_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14967..15980
DNA (1014bp) protein (338aa)
Protein-arginine kinase {ECO:0000256|HAMAP-Rule:MF_00602, ECO:0000256|SAAS:SAAS00166216}; EC=2.7.14.1 {ECO:0000256|HAMAP-Rule:MF_00602, ECO:0000256|SAAS:SAAS00166206};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Putative ATP:guanido phosphotransferase HMPREF9476_02490 n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CVB9_CLOPF
ATP:guanido phosphotransferase
L2_021_096G1_scaffold_169_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16005..18455
DNA (2451bp) protein (817aa)
Negative regulator of genetic competence MecB/ClpC {ECO:0000313|EMBL:EDT26011.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDT26011.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Negative regulator of genetic competence MecB/ClpC n=3 Tax=Clostridium perfringens RepID=B1RJ62_CLOPF
clpC; negative regulator of genetic competence MecB/ClpC
L2_021_096G1_scaffold_169_19
unknown

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18532..18879
DNA (348bp) protein (116aa)

This feature has no annotations

L2_021_096G1_scaffold_169_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19099..20037
DNA (939bp) protein (313aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Thioredoxin reductase n=10 Tax=Clostridium perfringens RepID=H7CZE5_CLOPF
thioredoxin-disulfide reductase
L2_021_096G1_scaffold_169_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20040..20273
DNA (234bp) protein (78aa)
YruB family glutaredoxin-like protein n=11 Tax=Clostridium perfringens RepID=H7CZE4_CLOPF
YruB family glutaredoxin-like protein
Glutaredoxin-like protein, YruB-family {ECO:0000313|EMBL:EDT26005.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_021_096G1_scaffold_169_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20290..21738
DNA (1449bp) protein (483aa)
gapN; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.9)
Glyceraldehyde-3-phosphate dehydrogenase, NADP-dependent {ECO:0000313|EMBL:EDT22969.1}; EC=1.2.1.9 {ECO:0000313|EMBL:EDT22969.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Glyceraldehyde-3-phosphate dehydrogenase, NADP-dependent n=3 Tax=Clostridium perfringens RepID=Q0TML4_CLOP1
L2_021_096G1_scaffold_169_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21862..22089)
DNA (228bp) protein (76aa)
YruB family glutaredoxin-like protein n=10 Tax=Clostridium perfringens RepID=H7CZE2_CLOPF
glutaredoxin
Glutaredoxin-like protein, YruB-family {ECO:0000313|EMBL:EDT14437.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_021_096G1_scaffold_169_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22183..22347)
DNA (165bp) protein (55aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CZE1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA15949.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_021_096G1_scaffold_169_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22547..23275
DNA (729bp) protein (243aa)
Transcriptional regulator, GntR family n=2 Tax=Clostridium perfringens RepID=B1RA04_CLOPF
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDT22932.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
GntR family transcriptional regulator
L2_021_096G1_scaffold_169_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23266..23994
DNA (729bp) protein (243aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
nagB; glucosamine-6-phosphate deaminase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RA05_CLOPF
L2_021_096G1_scaffold_169_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24221..25606
DNA (1386bp) protein (462aa)
DNA repair protein radA n=3 Tax=Clostridium perfringens RepID=B1BV32_CLOPF
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
radA; DNA repair protein RadA
L2_021_096G1_scaffold_169_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25626..26690
DNA (1065bp) protein (355aa)
DNA integrity scanning protein DisA n=9 Tax=Clostridium perfringens RepID=DISA_CLOPE
DNA integrity scanning protein DisA
DNA integrity scanning protein DisA {ECO:0000256|HAMAP-Rule:MF_01438, ECO:0000256|SAAS:SAAS00010389}; Cyclic di-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01438}; Diadenylate cyclase {ECO:0000256|HAMAP-Rule:MF_01438, ECO:0000256|SAAS:SAAS00207481}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_021_096G1_scaffold_169_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26724..27125)
DNA (402bp) protein (134aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=Q8XHQ1_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82137.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_096G1_scaffold_169_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27392..28543
DNA (1152bp) protein (384aa)
PIN/TRAM domain protein n=2 Tax=Clostridium perfringens RepID=B1BK22_CLOPF
PIN/TRAM domain-containing protein
PIN/TRAM domain protein {ECO:0000313|EMBL:EDT14415.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Displaying items 1-30 of 39 in total

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