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L2_021_096G1_scaffold_221

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_096G1_scaffold_221_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

136..1737
DNA (1602bp) protein (534aa)
Uncharacterized protein n=7 Tax=Bifidobacterium longum RepID=C2GVB9_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ67282.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_021_096G1_scaffold_221_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1887..2519)
DNA (633bp) protein (211aa)
Uncharacterized protein n=15 Tax=Bifidobacterium RepID=Q8G3V3_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK70028.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L2_021_096G1_scaffold_221_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2595..4958)
DNA (2364bp) protein (788aa)
Tetratricopeptide repeats containing protein n=8 Tax=Bifidobacterium longum RepID=E4R3F2_BIFLM
TPR repeat-containing protein
Uncharacterized protein {ECO:0000313|EMBL:AAN25438.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_021_096G1_scaffold_221_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5045..6235)
DNA (1191bp) protein (397aa)
Arabinose efflux permease n=10 Tax=Bifidobacterium RepID=B3DQI3_BIFLD
major facilitator superfamily protein
Arabinose efflux permease {ECO:0000313|EMBL:ACD99221.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_021_096G1_scaffold_221_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6736..8418
DNA (1683bp) protein (561aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Lysine--tRNA ligase n=8 Tax=Bifidobacterium RepID=B3DQI4_BIFLD
lysyl-tRNA synthetase
L2_021_096G1_scaffold_221_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8479..9444
DNA (966bp) protein (322aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=7 Tax=Bifidobacterium RepID=B3DQI5_BIFLD
1,4-dihydroxy-2-naphthoate octaprenyltransferase
L2_021_096G1_scaffold_221_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9504..10244
DNA (741bp) protein (247aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=21 Tax=Bifidobacterium RepID=GPMA_BIFLD
phosphoglyceromutase
L2_021_096G1_scaffold_221_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10603..11277)
DNA (675bp) protein (225aa)
Phosphate-specific transport system accessory protein PhoU n=13 Tax=Bifidobacterium longum RepID=B3DQI7_BIFLD
phoU; phou
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L2_021_096G1_scaffold_221_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11576..12661
DNA (1086bp) protein (362aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
Histidine kinase sensor of two component system n=10 Tax=Bifidobacterium longum RepID=Q8G3U7_BIFLO
two-component sensor kinase
L2_021_096G1_scaffold_221_10
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12786..13046)
DNA (261bp) protein (87aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=Q8G3U6_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY96421.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_021_096G1_scaffold_221_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13170..14312)
DNA (1143bp) protein (381aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Phosphoserine aminotransferase n=13 Tax=Bifidobacterium RepID=B3DQJ0_BIFLD
phosphoserine aminotransferase
L2_021_096G1_scaffold_221_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14706..15662
DNA (957bp) protein (319aa)
Surface antigen protein n=14 Tax=Bifidobacterium longum RepID=B3DQJ1_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESV34137.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L2_021_096G1_scaffold_221_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15977..16621
DNA (645bp) protein (215aa)
NlpC/P60 family protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XX52_9BIFI
NLP/P60 protein {ECO:0000313|EMBL:KFI73686.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_021_096G1_scaffold_221_14
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16776..17510
DNA (735bp) protein (245aa)
NlpC/P60 family protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XX51_9BIFI
NlpC/P60 family protein {ECO:0000313|EMBL:EFV37771.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
NLP/P60 protein
L2_021_096G1_scaffold_221_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17678..18715
DNA (1038bp) protein (346aa)
Universal stress protein n=17 Tax=Bifidobacterium RepID=B3DQJ4_BIFLD
hypothetical protein
Universal stress protein {ECO:0000313|EMBL:BAP84191.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L2_021_096G1_scaffold_221_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18774..19187)
DNA (414bp) protein (138aa)
OsmC family protein n=20 Tax=Bifidobacterium RepID=B7GUQ8_BIFLS
hypothetical protein
OsmC family protein {ECO:0000313|EMBL:ACJ53204.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_021_096G1_scaffold_221_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19315..20187
DNA (873bp) protein (291aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Thymidylate synthase n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GVD6_BIFLN
thymidylate synthase
L2_021_096G1_scaffold_221_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20187..20291
DNA (105bp) protein (35aa)
Uncharacterized protein {ECO:0000313|EMBL:CEF04991.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
L2_021_096G1_scaffold_221_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20297..20959
DNA (663bp) protein (221aa)
Dihydrofolate reductase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=E8MMZ2_BIFLS
dihydrofolate reductase
Diacylglycerol kinase {ECO:0000313|EMBL:KEY26243.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L2_021_096G1_scaffold_221_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21083..21601
DNA (519bp) protein (173aa)
Protein-tyrosine-phosphatase n=18 Tax=Bifidobacterium RepID=B3DQJ8_BIFLD
phosphatase
Phosphatase {ECO:0000313|EMBL:BAJ71801.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_021_096G1_scaffold_221_21
unknown

Not on your lists

21612..21833
DNA (222bp) protein (74aa)

This feature has no annotations

L2_021_096G1_scaffold_221_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21780..22112)
DNA (333bp) protein (111aa)
Predicted branched-chain amino acid permeases (Azaleucine resistance) n=18 Tax=Bifidobacterium RepID=D6DBY9_BIFLN
branched-chain amino acid transport protein
Branched-chain amino acid permease {ECO:0000313|EMBL:AIW44204.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_096G1_scaffold_221_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22109..22912)
DNA (804bp) protein (268aa)
Putative azaleucine resistance protein AzlC n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GVE0_BIFLN
Putative azaleucine resistance protein AzlC {ECO:0000313|EMBL:EEI80760.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
azlC; branched-chain amino acid permease
L2_021_096G1_scaffold_221_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23235..23405
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DQK1_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD99239.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_021_096G1_scaffold_221_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23576..24838
DNA (1263bp) protein (421aa)
Integrase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ASM4_BIFLN
xerC5; Integrase
Integrase {ECO:0000313|EMBL:AEI96845.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_021_096G1_scaffold_221_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25080..25442)
DNA (363bp) protein (121aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=S2ZDX6_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:CEF10683.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
Hypothetical membrane spanning protein
L2_021_096G1_scaffold_221_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25458..26102)
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DBY8_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK70009.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L2_021_096G1_scaffold_221_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26319..26444
DNA (126bp) protein (42aa)
Uncharacterized protein n=4 Tax=Bifidobacterium longum RepID=B3DQK4_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD99242.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Displaying 28 items

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