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L2_021_096G1_scaffold_270

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_096G1_scaffold_270_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..119)
DNA (117bp) protein (39aa)
30S ribosomal protein S1 n=9 Tax=Gardnerella vaginalis RepID=E3DAH2_GARV3
30S ribosomal protein S1
30S ribosomal protein S1 {ECO:0000313|EMBL:ETO97807.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L2_021_096G1_scaffold_270_2
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(273..1148)
DNA (876bp) protein (292aa)
Bifunctional protein FolD n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=FOLD_BIFAA
folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L2_021_096G1_scaffold_270_3
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1294..2361
DNA (1068bp) protein (356aa)
Possible solute binding protein of ABC transporter system n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A170_BIFAA
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFI95970.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
ABC transporter substrate-binding protein
L2_021_096G1_scaffold_270_4
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2561..3424
DNA (864bp) protein (288aa)
ATP binding protein of ABC transporter n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A169_BIFAA
troB; ABC transporter ATP-binding protein
ATP binding protein of ABC transporter {ECO:0000313|EMBL:BAF39452.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L2_021_096G1_scaffold_270_5
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3427..4263
DNA (837bp) protein (279aa)
ABC 3 transport family protein n=2 Tax=Bifidobacterium RepID=A7A671_BIFAD
ABC transporter permease
Putative permease of ABC transporter system {ECO:0000313|EMBL:AJE05705.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_021_096G1_scaffold_270_6
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4272..4748)
DNA (477bp) protein (159aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=3 Tax=Bifidobacterium RepID=A1A167_BIFAA
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
L2_021_096G1_scaffold_270_7
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4759..5355)
DNA (597bp) protein (199aa)
CarD-like protein n=2 Tax=Bifidobacterium RepID=A7A673_BIFAD
putative transcriptional regulator
CarD-like protein {ECO:0000313|EMBL:CCY18517.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L2_021_096G1_scaffold_270_8
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5493..7748
DNA (2256bp) protein (752aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
1,4-alpha-glucan branching enzyme GlgB n=2 Tax=Bifidobacterium RepID=A7A674_BIFAD
1,4-alpha-glucan branching enzyme
L2_021_096G1_scaffold_270_9
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7764..8486
DNA (723bp) protein (241aa)
Response regulator of two-component system n=3 Tax=root RepID=A1A164_BIFAA
response regulator of two-component system
Response regulator of two-component system {ECO:0000313|EMBL:CCY18515.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L2_021_096G1_scaffold_270_10
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8511..9587
DNA (1077bp) protein (359aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Sensor protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A163_BIFAA
sensor protein
L2_021_096G1_scaffold_270_11
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9592..10308)
DNA (717bp) protein (239aa)
Phosphoribosyl transferase domain protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GMU1_9BIFI
Phosphoribosyl transferase domain protein {ECO:0000313|EMBL:CCY18513.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
hypothetical protein
L2_021_096G1_scaffold_270_12
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10319..11125)
DNA (807bp) protein (269aa)
Putative eukaryotic phosphomannomutase n=2 Tax=Bifidobacterium RepID=A7A678_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE05698.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_021_096G1_scaffold_270_13
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11202..11630
DNA (429bp) protein (143aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A160_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII76127.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_021_096G1_scaffold_270_14
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11634..13163)
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GM93_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI95981.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L2_021_096G1_scaffold_270_15
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13160..16264)
DNA (3105bp) protein (1035aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A158_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF39441.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L2_021_096G1_scaffold_270_16
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16298..16597)
DNA (300bp) protein (100aa)
Transcriptional regulator WhiB n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A157_BIFAA
whiB2; WhiB-type transcription regulator
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L2_021_096G1_scaffold_270_17
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16862..18265
DNA (1404bp) protein (468aa)
Cell envelope-like function transcriptional attenuator common domain protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H0P6_9BIFI
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:KFI95984.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L2_021_096G1_scaffold_270_18
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18331..19683
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A155_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF39438.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L2_021_096G1_scaffold_270_19
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19843..21540
DNA (1698bp) protein (566aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A154_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF39437.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L2_021_096G1_scaffold_270_20
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21645..21923
DNA (279bp) protein (93aa)
Transcriptional regulator WhiB n=6 Tax=Bifidobacterium RepID=A1A153_BIFAA
hypothetical protein
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Displaying 20 items

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