ggKbase home page

L2_021_096G1_scaffold_313

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_096G1_scaffold_313_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..466
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09629 RepID=R1HSE3_CITFR
Periplasmic protein {ECO:0000313|EMBL:KJC04872.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_021_096G1_scaffold_313_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(393..1577)
DNA (1185bp) protein (395aa)
Multidrug resistance protein D n=6 Tax=Citrobacter RepID=J0VLS4_9ENTR
Multidrug resistance protein D {ECO:0000313|EMBL:KJC11868.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
emrD; multidrug resistance protein D
L2_021_096G1_scaffold_313_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1771..2604)
DNA (834bp) protein (278aa)
Integral membrane protein n=4 Tax=Citrobacter RepID=J0M0F3_9ENTR
Integral membrane protein {ECO:0000313|EMBL:ETX67622.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
membrane protein
L2_021_096G1_scaffold_313_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3336..3434
DNA (99bp) protein (33aa)
Uncharacterized protein n=6 Tax=Citrobacter RepID=C1ME07_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KDF08210.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
ivbL; ilvB operon leader peptide
L2_021_096G1_scaffold_313_5
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3542..5230
DNA (1689bp) protein (563aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
acetolactate synthase catalytic subunit (EC:2.2.1.6)
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=Shigella flexneri 1235-66 RepID=I6HFU8_SHIFL
L2_021_096G1_scaffold_313_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5234..5524
DNA (291bp) protein (97aa)
acetolactate synthase 1 regulatory subunit (EC:2.2.1.6)
Acetolactate synthase isozyme 1 small subunit n=12 Tax=Enterobacteriaceae RepID=C1ME05_9ENTR
Acetolactate synthase isozyme 1 small subunit {ECO:0000313|EMBL:ETX61657.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
L2_021_096G1_scaffold_313_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5680..6273
DNA (594bp) protein (198aa)
Transcriptional regulatory protein uhpA n=8 Tax=Citrobacter RepID=C1ME00_9ENTR
Transcriptional regulatory protein uhpA {ECO:0000313|EMBL:ETX61652.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
uhpA; Transcriptional regulatory protein UhpA
L2_021_096G1_scaffold_313_8
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6270..7772
DNA (1503bp) protein (501aa)
Sensor histidine protein kinase UhpB, glucose-6-phosphate specific {ECO:0000313|EMBL:CEJ64668.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CEJ64668.1};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
histidine kinase (EC:2.7.13.3)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6HFV1_SHIFL
L2_021_096G1_scaffold_313_9
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7782..9110
DNA (1329bp) protein (443aa)
Regulatory protein uhpC n=1 Tax=Shigella flexneri 1235-66 RepID=I6HFV2_SHIFL
Hexose phosphate uptake regulatory protein UhpC {ECO:0000313|EMBL:CEJ64669.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
regulatory protein UhpC
L2_021_096G1_scaffold_313_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9252..10643
DNA (1392bp) protein (464aa)
Sugar phosphate antiporter n=8 Tax=Citrobacter RepID=J0LU85_9ENTR
Hexose phosphate transport protein {ECO:0000313|EMBL:KEL79779.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
uhpT; sugar phosphate antiporter
L2_021_096G1_scaffold_313_11
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10691..11314)
DNA (624bp) protein (208aa)
2-dehydro-3-deoxy-6-phosphogalactonate aldolase {ECO:0000313|EMBL:EIQ79647.1}; EC=4.1.2.21 {ECO:0000313|EMBL:EIQ79647.1};; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Shigella flexneri 1235-66 RepID=I6HFV5_SHIFL
2-dehydro-3-deoxy-6-phosphogalactonate aldolase
L2_021_096G1_scaffold_313_12
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11307..12203)
DNA (897bp) protein (299aa)
2-dehydro-3-deoxygalactonokinase n=1 Tax=Shigella flexneri 1235-66 RepID=I6HFV6_SHIFL
2-dehydro-3-deoxygalactonokinase {ECO:0000313|EMBL:GAL46044.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
2-dehydro-3-deoxygalactonokinase
L2_021_096G1_scaffold_313_13
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12255..13565)
DNA (1311bp) protein (437aa)
Major Facilitator Superfamily protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6HFV8_SHIFL
Major Facilitator Superfamily protein {ECO:0000313|EMBL:EIQ79650.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
major facilitator transporter
L2_021_096G1_scaffold_313_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13634..15151)
DNA (1518bp) protein (506aa)
D-galactarate dehydratase/altronate hydrolase family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6HFV9_SHIFL
Uncharacterized protein {ECO:0000313|EMBL:KDF08202.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
galactarate dehydratase
L2_021_096G1_scaffold_313_15
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15173..16072)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6HFW0_SHIFL
Uncharacterized protein {ECO:0000313|EMBL:EIQ79652.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
2-keto-3-deoxy-galactonate aldolase
L2_021_096G1_scaffold_313_16
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16319..17074
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6HFW1_SHIFL
Uncharacterized protein {ECO:0000313|EMBL:EIQ79653.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
IclR family transcriptional regulator
L2_021_096G1_scaffold_313_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17095..17547
DNA (453bp) protein (151aa)
Inner membrane protein n=6 Tax=Citrobacter RepID=J1FYC6_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KEL79780.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
L2_021_096G1_scaffold_313_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17717..18439
DNA (723bp) protein (241aa)
Purine ribonucleoside efflux pump NepI n=3 Tax=Citrobacter RepID=J1FY63_9ENTR
Purine ribonucleoside efflux pump NepI {ECO:0000256|HAMAP-Rule:MF_01189}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
nepI; ribonucleoside transporter
Displaying 18 items

View Taxonomy