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L2_021_096G1_scaffold_326

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_096G1_scaffold_326_1
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(52..1149)
DNA (1098bp) protein (366aa)
Soluble aldose sugar dehydrogenase, PQQ-dependent {ECO:0000313|EMBL:CEJ63690.1}; EC=1.1.5.- {ECO:0000313|EMBL:CEJ63690.1};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
Soluble aldose sugar dehydrogenase yliI n=1 Tax=Shigella flexneri 1235-66 RepID=I6HBV3_SHIFL
oxidoreductase
L2_021_096G1_scaffold_326_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1252..1635)
DNA (384bp) protein (128aa)
Biofilm formation regulatory protein BssR n=3 Tax=Citrobacter RepID=J0VVL0_9ENTR
Biofilm formation family protein {ECO:0000313|EMBL:KEL82725.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
bssR; biofilm formation regulatory protein BssR
L2_021_096G1_scaffold_326_3
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1865..3190
DNA (1326bp) protein (442aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Citrobacter sp. KTE151 RepID=R8X5B7_9ENTR
rimO; ribosomal protein S12 methylthiotransferase
L2_021_096G1_scaffold_326_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3282..4160)
DNA (879bp) protein (293aa)
Glutathione transport system permease gsiD n=2 Tax=Citrobacter RepID=C1M9D4_9ENTR
Glutathione transport system permease gsiD {ECO:0000313|EMBL:KDF21226.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
glutathione ABC transporter permease
L2_021_096G1_scaffold_326_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4196..5143)
DNA (948bp) protein (316aa)
Glutathione ABC transporter permease GsiC n=3 Tax=Citrobacter RepID=K8R239_CITFR
Glutathione ABC transporter permease {ECO:0000313|EMBL:KJC10159.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
glutathione ABC transporter permease
L2_021_096G1_scaffold_326_6
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5163..6701)
DNA (1539bp) protein (513aa)
Heme-binding protein n=4 Tax=Citrobacter RepID=J0M9N5_9ENTR
glutathione ABC transporter substrate-binding protein
Glutathione ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAL44735.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L2_021_096G1_scaffold_326_7
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6730..8601)
DNA (1872bp) protein (624aa)
Glutathione import ATP-binding protein GsiA n=1 Tax=Shigella flexneri 1235-66 RepID=I6HBW0_SHIFL
Glutathione transporter ATP-binding protein {ECO:0000313|EMBL:CEJ63683.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
glutathione ABC transporter ATP-binding protein
L2_021_096G1_scaffold_326_8
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8588..9553)
DNA (966bp) protein (322aa)
Isoaspartyl peptidase {ECO:0000313|EMBL:EIQ78253.1}; EC=3.4.19.5 {ECO:0000313|EMBL:EIQ78253.1};; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
Isoaspartyl peptidase n=1 Tax=Shigella flexneri 1235-66 RepID=I6HBW1_SHIFL
isoaspartyl peptidase
L2_021_096G1_scaffold_326_9
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9745..10533)
DNA (789bp) protein (263aa)
Streptomycin 3''-adenylyltransferase {ECO:0000256|PIRNR:PIRNR000819}; EC=2.7.7.47 {ECO:0000256|PIRNR:PIRNR000819};; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
Streptomycin 3''-adenylyltransferase n=1 Tax=Citrobacter sp. KTE151 RepID=R8X116_9ENTR
aminoglycoside resistance protein
L2_021_096G1_scaffold_326_10
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10709..11944
DNA (1236bp) protein (412aa)
Molybdopterin molybdenumtransferase {ECO:0000313|EMBL:EIQ78254.1}; EC=2.-.-.- {ECO:0000313|EMBL:EIQ78254.1};; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
Molybdopterin molybdenumtransferase n=1 Tax=Shigella flexneri 1235-66 RepID=I6HBW2_SHIFL
molybdopterin biosynthesis protein MoeA
L2_021_096G1_scaffold_326_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11944..12693
DNA (750bp) protein (250aa)
Sulfur carrier protein moaD adenylyltransferase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UYJ8_9ENTR
Molybdopterin-synthase adenylyltransferase {ECO:0000313|EMBL:KJC08260.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
molybdopterin-synthase adenylyltransferase
L2_021_096G1_scaffold_326_12
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12780..13442)
DNA (663bp) protein (221aa)
Fructose-6-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00496}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_00496};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
Fructose-6-phosphate aldolase n=1 Tax=Shigella flexneri 1235-66 RepID=I6HBW4_SHIFL
fructose-6-phosphate aldolase
L2_021_096G1_scaffold_326_13
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13575..14474
DNA (900bp) protein (300aa)
Pyruvate formate-lyase activating enzyme {ECO:0000313|EMBL:CEJ63678.1}; EC=1.97.1.4 {ECO:0000313|EMBL:CEJ63678.1};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
Pyruvate formate lyase activating enzyme n=1 Tax=Citrobacter sp. KTE30 RepID=R8UZG2_9ENTR
pyruvate formate lyase-activating protein
L2_021_096G1_scaffold_326_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14480..16912
DNA (2433bp) protein (811aa)
Putative formate acetyltransferase 3 n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SHB9_CITFR
Formate C-acetyltransferase {ECO:0000313|EMBL:ETX64083.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
formate acetyltransferase
L2_021_096G1_scaffold_326_15
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17082..17897
DNA (816bp) protein (272aa)
Sugar phosphatase SupH n=3 Tax=Citrobacter RepID=J0M9M6_9ENTR
HMP-PP hydrolase (Pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) {ECO:0000313|EMBL:CEJ63676.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
sugar phosphatase
L2_021_096G1_scaffold_326_16
unknown

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comp(17858..17938)
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 16 items

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