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L2_021_096G1_scaffold_330

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_096G1_scaffold_330_1
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1101
DNA (1101bp) protein (367aa)
Putrescine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01276}; EC=2.6.1.82 {ECO:0000256|HAMAP-Rule:MF_01276};; Putrescine--2-oxoglutaric acid transaminase {ECO:0000256|HAMAP-Rule:MF_01276}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
putrescine--2-oxoglutarate aminotransferase (EC:2.6.1.82)
Putrescine aminotransferase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BJH8_9ENTR
L2_021_096G1_scaffold_330_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1244..1573
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SCY4_CITFR
Alpha-glucosidase {ECO:0000313|EMBL:KJC05745.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ygjK; glycosyl hydrolase
L2_021_096G1_scaffold_330_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1718..3736
DNA (2019bp) protein (673aa)
fadH; 2,4-dienoyl-CoA reductase (EC:1.3.1.34)
2,4-dienoyl-CoA reductase [NADPH] n=1 Tax=Citrobacter sp. 30_2 RepID=C1M9P8_9ENTR
2,4-dienoyl-CoA reductase [NADPH] {ECO:0000313|EMBL:ETX62367.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
L2_021_096G1_scaffold_330_4
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3791..4927)
DNA (1137bp) protein (379aa)
Ribosomal RNA large subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_01859, ECO:0000256|SAAS:SAAS00036146}; EC=2.1.1.174 {ECO:0000256|HAMAP-Rule:MF_01859, ECO:0000256|SAAS:SAAS00036145};; 23S rRNA m2G1835 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01859}; rRNA (guanine-N(2)-)-methyltransferase RlmG {ECO:0000256|HAMAP-Rule:MF_01859}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
Ribosomal RNA large subunit methyltransferase G n=1 Tax=Shigella flexneri 1235-66 RepID=I6GPE7_SHIFL
hypothetical protein
L2_021_096G1_scaffold_330_5
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5012..5515
DNA (504bp) protein (168aa)
Metal-dependent hydrolase n=1 Tax=Citrobacter sp. KTE32 RepID=R8V371_9ENTR
COG1451: Predicted metal-dependent hydrolase {ECO:0000313|EMBL:CEJ63772.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
metal-dependent hydrolase
L2_021_096G1_scaffold_330_6
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5585..6583
DNA (999bp) protein (333aa)
Oxidoreductase , NAD-binding Rossmann fold family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6GPE9_SHIFL
Oxidoreductase , NAD-binding Rossmann fold family protein {ECO:0000313|EMBL:EIQ70391.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
oxidoreductase
L2_021_096G1_scaffold_330_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6854..7822
DNA (969bp) protein (323aa)
Inner membrane protein alx n=5 Tax=Citrobacter RepID=C1M9Q2_9ENTR
Membrane protein {ECO:0000313|EMBL:KJC05794.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
L2_021_096G1_scaffold_330_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8065..9309
DNA (1245bp) protein (415aa)
Serine/threonine transporter SstT n=1 Tax=Citrobacter freundii GTC 09629 RepID=R1FND8_CITFR
Serine/threonine transporter SstT {ECO:0000256|HAMAP-Rule:MF_01582, ECO:0000256|SAAS:SAAS00015301}; Na(+)/serine-threonine symporter {ECO:0000256|HAMAP-Rule:MF_01582}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
serine/threonine protein kinase
L2_021_096G1_scaffold_330_9
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9326..9880)
DNA (555bp) protein (185aa)
Inner membrane protein ygjV n=1 Tax=Shigella flexneri 1235-66 PF3_SHIFL">RepID=I6GPF3_SHIFL
Inner membrane protein ygjV {ECO:0000313|EMBL:CEJ63767.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
membrane protein
L2_021_096G1_scaffold_330_10
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10015..11502)
DNA (1488bp) protein (496aa)
Altronate hydrolase n=1 Tax=Shigella flexneri 1235-66 PF5_SHIFL">RepID=I6GPF5_SHIFL
Altronate hydrolase {ECO:0000313|EMBL:EIQ70397.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
altronate hydrolase
L2_021_096G1_scaffold_330_11
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11663..13075)
DNA (1413bp) protein (471aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
glucuronate isomerase (EC:5.3.1.12)
Uronate isomerase n=1 Tax=Shigella flexneri 1235-66 PF6_SHIFL">RepID=I6GPF6_SHIFL
L2_021_096G1_scaffold_330_12
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13550..14851
DNA (1302bp) protein (434aa)
Hexuronate transporter n=1 Tax=Shigella flexneri 1235-66 PF8_SHIFL">RepID=I6GPF8_SHIFL
Hexuronate transporter {ECO:0000313|EMBL:CEJ63764.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
hexuronate transporter
L2_021_096G1_scaffold_330_13
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14986..15762
DNA (777bp) protein (259aa)
Bacterial regulatory s, gntR family protein n=1 Tax=Shigella flexneri 1235-66 PF9_SHIFL">RepID=I6GPF9_SHIFL
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:EIQ70401.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
transcriptional regulator
L2_021_096G1_scaffold_330_14
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16112..16774
DNA (663bp) protein (221aa)
Inner membrane protein YqjA n=1 Tax=Shigella flexneri 1235-66 RepID=I6GPG1_SHIFL
DedA family inner membrane protein YqjA {ECO:0000313|EMBL:CEJ63761.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
membrane protein
L2_021_096G1_scaffold_330_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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16778..17161
DNA (384bp) protein (128aa)
Modulator protein MzrA n=3 Tax=Citrobacter RepID=K8QND8_CITFR
Modulator protein MzrA {ECO:0000256|HAMAP-Rule:MF_00904}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
EnvZ/OmpR regulon moderator
L2_021_096G1_scaffold_330_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17310..17678
DNA (369bp) protein (123aa)
YqjC n=6 Tax=Citrobacter RepID=J0M6X3_9ENTR
Protein yqjC {ECO:0000313|EMBL:ETX67898.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_021_096G1_scaffold_330_17
unknown

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17712..17771
DNA (60bp) protein (20aa)

This feature has no annotations

Displaying 17 items

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