ggKbase home page

L2_021_096G1_scaffold_342

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_096G1_scaffold_342_1
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34..1443
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6H511_SHIFL
Uncharacterized protein {ECO:0000313|EMBL:EIQ75853.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
GntR family transcriptional regulator
L2_021_096G1_scaffold_342_2
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1773..2918
DNA (1146bp) protein (382aa)
Bacterial extracellular solute-binding family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6H512_SHIFL
Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:EIQ75854.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
spermidine/putrescine ABC transporter substrate-binding protein
L2_021_096G1_scaffold_342_3
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2935..3951
DNA (1017bp) protein (339aa)
Spermidine/putrescine transporter subunit n=1 Tax=Citrobacter sp. KTE32 RepID=R8VCI7_9ENTR
Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) {ECO:0000313|EMBL:CEJ64254.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
polyamine ABC transporter ATP-binding protein
L2_021_096G1_scaffold_342_4
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3952..4896
DNA (945bp) protein (315aa)
Inner membrane ABC transporter permease protein ydcU n=1 Tax=Shigella flexneri 1235-66 RepID=I6H514_SHIFL
Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) {ECO:0000313|EMBL:CEJ64255.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
spermidine/putrescine ABC transporter permease
L2_021_096G1_scaffold_342_5
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4886..5692
DNA (807bp) protein (269aa)
Inner membrane ABC transporter permease protein ydcV n=1 Tax=Shigella flexneri 1235-66 RepID=I6H515_SHIFL
Inner membrane ABC transporter permease protein ydcV {ECO:0000313|EMBL:EIQ75857.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
spermidine/putrescine ABC transporter permease
L2_021_096G1_scaffold_342_6
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5714..7141
DNA (1428bp) protein (476aa)
Gamma-aminobutyraldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01275}; EC=1.2.1.19 {ECO:0000256|HAMAP-Rule:MF_01275};; 1-pyrroline dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01275}; 4-aminobutanal dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01275}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
gamma-aminobutyraldehyde dehydrogenase (EC:1.2.1.19)
Gamma-aminobutyraldehyde dehydrogenase n=1 Tax=Shigella flexneri 1235-66 RepID=I6H516_SHIFL
L2_021_096G1_scaffold_342_7
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7331..8458)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE151 RepID=R8WXB4_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EOQ49231.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
major facilitator transporter
L2_021_096G1_scaffold_342_8
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8559..9341
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M4S7_9ENTR
AraC family transcriptional regulator {ECO:0000313|EMBL:KKC63113.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
AraC family transcriptional regulator
L2_021_096G1_scaffold_342_9
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9751..9924
DNA (174bp) protein (58aa)
Inner membrane protein n=2 Tax=Citrobacter RepID=R8VCD9_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:CEJ64260.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
hypothetical protein
L2_021_096G1_scaffold_342_10
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9944..12103)
DNA (2160bp) protein (720aa)
Putative virulence effector protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6H520_SHIFL
Putative virulence factor {ECO:0000313|EMBL:CEJ64261.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
virulence effector SrfC
L2_021_096G1_scaffold_342_11
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12100..15078)
DNA (2979bp) protein (993aa)
Virulence factor SrfB family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6H521_SHIFL
SrfB {ECO:0000313|EMBL:CEJ64262.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
virulence factor SrfB
L2_021_096G1_scaffold_342_12
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15083..16393)
DNA (1311bp) protein (437aa)
Myosin light chain kinase, smooth muscle n=1 Tax=Shigella flexneri 1235-66 RepID=I6H522_SHIFL
Putative virulence effector protein {ECO:0000313|EMBL:CEJ64263.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
ssrAB activated protein
L2_021_096G1_scaffold_342_13
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16676..17326
DNA (651bp) protein (217aa)
Bacterial extracellular solute-binding s, 5 Middle family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6H523_SHIFL
Bacterial extracellular solute-binding s, 5 Middle family protein {ECO:0000313|EMBL:EIQ75865.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
peptide ABC transporter substrate-binding protein
Displaying 13 items

View Taxonomy