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L2_021_096G1_scaffold_363

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_096G1_scaffold_363_1
Enterobacter sp. 638, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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724..1506
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Enterobacter sp. (strain 638) RepID=A4WEB7_ENT38
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP62047.1}; TaxID=399742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. (strain 638).;"
L2_021_096G1_scaffold_363_2
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1752..2393
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M5L3_9ENTR
Ren protein {ECO:0000313|EMBL:CEJ65779.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
serine/threonine protein phosphatase
L2_021_096G1_scaffold_363_3
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2394..2585)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6HI39_SHIFL
Uncharacterized protein {ECO:0000313|EMBL:EIQ80431.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
hypothetical protein
L2_021_096G1_scaffold_363_4
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2658..3575)
DNA (918bp) protein (306aa)
LysR family transcriptional regulator n=1 Tax=Serratia marcescens WW4 RepID=L7ZNR0_SERMA
Glycine cleavage system transcriptional activator {ECO:0000313|EMBL:CEJ65777.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
LysR family transcriptional regulator
L2_021_096G1_scaffold_363_5
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3645..4883
DNA (1239bp) protein (413aa)
Major facilitator superfamily protein n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V5ZYM7_SERMA
Major facilitator family transporter {ECO:0000313|EMBL:CEJ65775.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
major facilitator superfamily transporter
L2_021_096G1_scaffold_363_6
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4911..5150)
DNA (240bp) protein (80aa)
Uncharacterized protein n=12 Tax=Enterobacteriaceae RepID=D4B6A2_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EFE10561.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
hypothetical protein
L2_021_096G1_scaffold_363_7
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5248..6669)
DNA (1422bp) protein (474aa)
Ribosomal RNA small subunit methyltransferase F {ECO:0000256|HAMAP-Rule:MF_01579}; EC=2.1.1.178 {ECO:0000256|HAMAP-Rule:MF_01579};; 16S rRNA m5C1407 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01579}; rRNA (cytosine-C(5)-)-methyltransferase RsmF {ECO:0000256|HAMAP-Rule:MF_01579}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
Ribosomal RNA small subunit methyltransferase F n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SKK8_CITFR
yebU; RNA methyltransferase RsmF
L2_021_096G1_scaffold_363_8
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6808..9441)
DNA (2634bp) protein (878aa)
Uncharacterized protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6HI45_SHIFL
Uncharacterized protein {ECO:0000313|EMBL:EIQ80437.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
hypothetical protein
L2_021_096G1_scaffold_363_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9410..10693)
DNA (1284bp) protein (428aa)
Inner membrane protein yebS n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SKK6_CITFR
Inner membrane protein yebS {ECO:0000313|EMBL:ETX63362.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
membrane protein
L2_021_096G1_scaffold_363_10
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10821..11318
DNA (498bp) protein (166aa)
Protein yebR n=1 Tax=Shigella flexneri 1235-66 RepID=I6HI47_SHIFL
Protein yebR {ECO:0000313|EMBL:EIQ80439.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
Free methionine-R-sulfoxide reductase
L2_021_096G1_scaffold_363_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11415..12101
DNA (687bp) protein (229aa)
ProP effector n=4 Tax=Citrobacter RepID=C1M5K6_9ENTR
prop expression regulator
RNA chaperone ProQ {ECO:0000256|HAMAP-Rule:MF_00749, ECO:0000256|SAAS:SAAS00012015}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
L2_021_096G1_scaffold_363_12
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12121..14169
DNA (2049bp) protein (683aa)
Tail-specific protease {ECO:0000313|EMBL:CEJ65768.1}; EC=3.4.21.102 {ECO:0000313|EMBL:CEJ65768.1};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
carboxy-terminal protease (EC:3.4.21.102)
Carboxy-terminal protease n=4 Tax=Citrobacter RepID=J1G238_9ENTR
L2_021_096G1_scaffold_363_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14362..15243
DNA (882bp) protein (294aa)
Protease HtpX {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; Heat shock protein HtpX {ECO:0000256|HAMAP-Rule:MF_00188}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Protease HtpX n=11 Tax=Citrobacter RepID=C1M5K4_9ENTR
heat shock protein HtpX
L2_021_096G1_scaffold_363_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15342..16292)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CLI5_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC12108.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Displaying 14 items

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