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L2_021_096G1_scaffold_433

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_096G1_scaffold_433_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..147)
DNA (147bp) protein (49aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
Tyrosine--tRNA ligase n=3 Tax=Escherichia fergusonii RepID=SYY_ESCF3
tyrosyl-tRNA synthetase
L2_021_096G1_scaffold_433_2
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(274..930)
DNA (657bp) protein (219aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5)
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Shigella flexneri 1235-66 RepID=I6H3S1_SHIFL
L2_021_096G1_scaffold_433_3
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(989..1312)
DNA (324bp) protein (108aa)
Membrane-bound lysozyme inhibitor of C-type lysozyme n=1 Tax=Shigella flexneri 1235-66 RepID=I6H3S2_SHIFL
Membrane-bound lysozyme inhibitor of c-type lysozyme {ECO:0000313|EMBL:CEJ67320.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
lysozyme inhibitor
L2_021_096G1_scaffold_433_4
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1406..2527)
DNA (1122bp) protein (374aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Shigella flexneri 1235-66 RepID=I6H3S3_SHIFL
anmK; anhydro-N-acetylmuramic acid kinase
L2_021_096G1_scaffold_433_5
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2802..3269
DNA (468bp) protein (156aa)
Outer membrane lipoprotein slyB n=10 Tax=Enterobacteriaceae RepID=C1M482_9ENTR
membrane protein
Outer membrane lipoprotein SlyB {ECO:0000313|EMBL:GAL44172.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L2_021_096G1_scaffold_433_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3318..3752)
DNA (435bp) protein (145aa)
Transcriptional regulator SlyA n=7 Tax=Citrobacter RepID=J0VLD5_9ENTR
transcriptional regulator SlyA
Transcriptional regulator SlyA {ECO:0000256|HAMAP-Rule:MF_01819}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
L2_021_096G1_scaffold_433_7
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3951..4187
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6H3S6_SHIFL
Uncharacterized protein {ECO:0000313|EMBL:EIQ75418.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
membrane protein
L2_021_096G1_scaffold_433_8
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4190..5053
DNA (864bp) protein (288aa)
HlyD secretion family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6H3S7_SHIFL
HlyD secretion family protein {ECO:0000313|EMBL:EIQ75419.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
membrane protein
L2_021_096G1_scaffold_433_9
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5050..7065
DNA (2016bp) protein (672aa)
Fusaric acid resistance conserved region family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6H3S8_SHIFL
Fusaric acid resistance conserved region family protein {ECO:0000313|EMBL:EIQ75420.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
hypothetical protein
L2_021_096G1_scaffold_433_10
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7066..7587)
DNA (522bp) protein (174aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
Superoxide dismutase [Cu-Zn] n=1 Tax=Shigella flexneri 1235-66 RepID=I6H3S9_SHIFL
superoxide dismutase
L2_021_096G1_scaffold_433_11
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7669..8565)
DNA (897bp) protein (299aa)
Oxidoreductase YdhF n=1 Tax=Shigella flexneri 1235-66 RepID=I6H3T0_SHIFL
Putative aldo/keto reductase {ECO:0000313|EMBL:CEJ67312.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
oxidoreductase
L2_021_096G1_scaffold_433_12
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8615..8854)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6H3T1_SHIFL
Uncharacterized protein {ECO:0000313|EMBL:EIQ75423.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
oxidoreductase
L2_021_096G1_scaffold_433_13
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8956..9555
DNA (600bp) protein (200aa)
HTH-type transcriptional repressor nemR n=1 Tax=Shigella flexneri 1235-66 RepID=I6H3T2_SHIFL
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CEJ67310.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
transcriptional repressor NemR
L2_021_096G1_scaffold_433_14
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9610..10707
DNA (1098bp) protein (366aa)
N-ethylmaleimide reductase n=7 Tax=Citrobacter RepID=J1FXN6_9ENTR
N-ethylmaleimide reductase {ECO:0000313|EMBL:EOQ49055.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
N-ethylmaleimide reductase
L2_021_096G1_scaffold_433_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10805..11212
DNA (408bp) protein (136aa)
Lactoylglutathione lyase {ECO:0000256|RuleBase:RU361179}; EC=4.4.1.5 {ECO:0000256|RuleBase:RU361179};; Glyoxalase I {ECO:0000256|RuleBase:RU361179}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
glyoxalase I (EC:4.4.1.5)
Lactoylglutathione lyase n=9 Tax=Citrobacter RepID=J0LZZ0_9ENTR
L2_021_096G1_scaffold_433_16
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11307..11954
DNA (648bp) protein (216aa)
Ribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157, ECO:0000256|SAAS:SAAS00051933}; EC=3.1.13.- {ECO:0000256|HAMAP-Rule:MF_00157};; Exoribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
Ribonuclease T n=1 Tax=Shigella flexneri 1235-66 RepID=I6H3T5_SHIFL
ribonuclease T
L2_021_096G1_scaffold_433_17
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12008..12355)
DNA (348bp) protein (116aa)
Glutaredoxin n=34 Tax=Enterobacteriaceae RepID=D5CBR5_ENTCC
glutaredoxin
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L2_021_096G1_scaffold_433_18
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12690..13520
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6H3T7_SHIFL
Uncharacterized protein {ECO:0000313|EMBL:CEJ67305.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
endopeptidase
L2_021_096G1_scaffold_433_19
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13648..13863
DNA (216bp) protein (72aa)
Superoxide dismutase n=8 Tax=Citrobacter RepID=C1M468_9ENTR
superoxide dismutase
Superoxide dismutase {ECO:0000313|EMBL:AKE58812.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
Displaying 19 items

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