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L2_021_124G1_scaffold_22

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Displaying items 1-30 of 148 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_124G1_scaffold_22_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(109..1467)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=99 Tax=Enterobacteriaceae RepID=B6I9A4_ECOSE
ycdT; diguanylate cyclase
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EGB88367.1}; TaxID=749539 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 117-3.;"
L2_021_124G1_scaffold_22_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2054..4477
DNA (2424bp) protein (808aa)
Poly-beta-1,6-N-acetyl-D-glucosamine export protein n=303 Tax=Enterobacteriaceae RepID=PGAA_ECO57
pgaA; Biofilm PGA synthesis protein pgaA precursor
Poly-beta-1,6-N-acetyl-D-glucosamine export protein {ECO:0000313|EMBL:KDV64764.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
L2_021_124G1_scaffold_22_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4486..6504
DNA (2019bp) protein (673aa)
Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB {ECO:0000313|EMBL:KDU50072.1}; EC=3.5.1.- {ECO:0000313|EMBL:KDU50072.1};; TaxID=1444224 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C1.;"
Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase n=304 Tax=Enterobacteriaceae RepID=PGAB_ECOLI
ycdR; hypothetical protein
L2_021_124G1_scaffold_22_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6497..7822
DNA (1326bp) protein (442aa)
Poly-beta-1,6-N-acetyl-D-glucosamine synthase n=356 Tax=Enterobacteriaceae RepID=PGAC_ECOLI
N-glycosyltransferase
Predicted glycosyl transferase {ECO:0000313|EMBL:BAI29911.1}; TaxID=585395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O103:H2 (strain 12009 / EHEC).;"
L2_021_124G1_scaffold_22_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7824..8237
DNA (414bp) protein (138aa)
Biofilm PGA synthesis protein PgaD n=1 Tax=Escherichia coli HVH 139 (4-3192644) RepID=T7CLI0_ECOLX
putative PGA biosynthesis protein
PgaD protein {ECO:0000313|EMBL:CAU96993.1}; TaxID=585055 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain 55989 / EAEC).;"
L2_021_124G1_scaffold_22_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8287..9075)
DNA (789bp) protein (263aa)
Protein phoH n=1 Tax=Escherichia coli UMEA 3682-1 RepID=T9QXV0_ECOLX
hypothetical protein
PhoH family protein {ECO:0000313|EMBL:EFJ88691.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
L2_021_124G1_scaffold_22_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9054..9350)
DNA (297bp) protein (99aa)
Uncharacterized protein n=59 Tax=Escherichia coli RepID=D7XIX2_ECOLX
Protein phoH {ECO:0000313|EMBL:KDV38612.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
hypothetical protein
L2_021_124G1_scaffold_22_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9694..10965)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=89 Tax=Escherichia coli RepID=C8TNC8_ECO26
ycdB; hypothetical protein
Tat-translocated enzyme {ECO:0000313|EMBL:EIH22606.1}; TaxID=869675 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2264.;"
L2_021_124G1_scaffold_22_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10971..12098)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=154 Tax=Enterobacteriaceae RepID=J7QZP4_ECOLX
efeO; inactive ferrous ion transporter periplasmic protein EfeO
Ferrous iron transporter {ECO:0000313|EMBL:AIZ86545.1}; Inactive ferrous ion transporter EfeUOB {ECO:0000313|EMBL:CCQ28054.2}; Protein YcdO {ECO:0000313|EMBL:AJE55330.1}; Strain O157 SvETEC scaffold54.1, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ44315.1}; Uncharacterized protein {ECO:0000313|EMBL:CCJ43562.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_021_124G1_scaffold_22_10
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12156..12986)
DNA (831bp) protein (277aa)
Ferrous iron permease EfeU n=770 Tax=Enterobacteriaceae RepID=EFEU_ECO57
FTR1 family protein
Ferrous iron transport permease EfeU {ECO:0000313|EMBL:EFW51646.1}; TaxID=941429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae CDC 74-1112.;"
L2_021_124G1_scaffold_22_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13652..15160)
DNA (1509bp) protein (503aa)
Sodium/proline symporter n=7 Tax=Enterobacteriaceae RepID=F4NDJ4_9ENTR
Sodium/proline symporter {ECO:0000313|EMBL:ESA73646.1}; TaxID=1268979 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907357.;"
putP; proline:sodium symporter PutP
L2_021_124G1_scaffold_22_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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15583..19545
DNA (3963bp) protein (1321aa)
Proline dehydrogenase {ECO:0000313|EMBL:ACI85271.1}; Transcriptional regulator {ECO:0000313|EMBL:KJJ47860.1}; EC=1.2.1.88 {ECO:0000313|EMBL:KJJ47860.1};; EC=1.5.5.2 {ECO:0000313|EMBL:KJJ47860.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Bifunctional protein putA n=2 Tax=Escherichia coli RepID=E7J331_ECOLX
putA; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase
L2_021_124G1_scaffold_22_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19585..20223)
DNA (639bp) protein (213aa)
Transcriptional regulator, TetR family protein n=2 Tax=Escherichia coli RepID=E7J332_ECOLX
RutR transcriptional dual regulator
Putative tet operon regulator {ECO:0000313|EMBL:CCJ43557.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_021_124G1_scaffold_22_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20511..21602
DNA (1092bp) protein (364aa)
Pyrimidine monooxygenase RutA {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023214}; EC=1.14.99.46 {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023208};; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
Pyrimidine monooxygenase RutA n=86 Tax=Enterobacteriaceae RepID=RUTA_ECO24
monooxygenase rutA
L2_021_124G1_scaffold_22_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21599..22294
DNA (696bp) protein (232aa)
Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB {ECO:0000256|HAMAP-Rule:MF_00830, ECO:0000256|SAAS:SAAS00023142}; EC=3.5.1.110 {ECO:0000256|HAMAP-Rule:MF_00830, ECO:0000256|SAAS:SAAS00023120};; Ureidoacrylate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_00830}; TaxID=679205 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 124-1.;"
Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB n=68 Tax=Enterobacteriaceae RepID=RUTB_ECOCB
isochorismatase, rutB
L2_021_124G1_scaffold_22_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22306..22692
DNA (387bp) protein (129aa)
Putative aminoacrylate peracid reductase RutC {ECO:0000256|HAMAP-Rule:MF_00831, ECO:0000256|SAAS:SAAS00023348}; EC=1.-.-.- {ECO:0000256|HAMAP-Rule:MF_00831, ECO:0000256|SAAS:SAAS00023353};; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C2.;"
Putative aminoacrylate peracid reductase RutC n=755 Tax=Enterobacteriaceae RepID=RUTC_ECO10
rutC; pyrimidine utilization protein C
L2_021_124G1_scaffold_22_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22700..23500
DNA (801bp) protein (267aa)
Putative aminoacrylate hydrolase RutD {ECO:0000256|HAMAP-Rule:MF_00832, ECO:0000256|SAAS:SAAS00023219}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00832, ECO:0000256|SAAS:SAAS00023215};; Aminohydrolase {ECO:0000256|HAMAP-Rule:MF_00832}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
Putative aminoacrylate hydrolase RutD n=2 Tax=Escherichia coli RepID=E7J336_ECOLX
enzyme of the alternative pyrimidine degradation pathway
L2_021_124G1_scaffold_22_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23510..24100
DNA (591bp) protein (197aa)
Probable malonic semialdehyde reductase RutE {ECO:0000256|HAMAP-Rule:MF_01204}; EC=1.1.1.298 {ECO:0000256|HAMAP-Rule:MF_01204};; TaxID=749545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 182-1.;"
Probable malonic semialdehyde reductase RutE n=171 Tax=Escherichia coli RepID=RUTE_ECO24
rutE; hypothetical protein
L2_021_124G1_scaffold_22_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24111..24605
DNA (495bp) protein (165aa)
FMN reductase (NADH) RutF {ECO:0000256|HAMAP-Rule:MF_00833}; EC=1.5.1.42 {ECO:0000256|HAMAP-Rule:MF_00833};; FMN reductase {ECO:0000256|HAMAP-Rule:MF_00833}; NADH-flavin reductase RutF {ECO:0000256|HAMAP-Rule:MF_00833}; NADH:flavin oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00833}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
FMN reductase (NADH) RutF n=2 Tax=Enterobacteriaceae RepID=F4NDK4_9ENTR
ycdH; putative oxidoreductase, flavin:NADH component
L2_021_124G1_scaffold_22_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24626..25954
DNA (1329bp) protein (443aa)
Pyrimidine utilization transporter G n=35 Tax=Escherichia coli RepID=D6HV55_ECOLX
Pyrimidine permease {ECO:0000313|EMBL:AIZ86533.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
purine permease ycdG
L2_021_124G1_scaffold_22_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26037..26210)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Escherichia coli UMEA 3490-1 RepID=T9LX63_ECOLX
ymdF; hypothetical protein
Stress-induced protein, KGG, repeat protein {ECO:0000313|EMBL:EIL36457.1}; TaxID=1165949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11 str. CVM9942.;"
L2_021_124G1_scaffold_22_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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26583..27179
DNA (597bp) protein (199aa)
NAD(P)H dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_01017}; EC=1.6.5.2 {ECO:0000256|HAMAP-Rule:MF_01017};; NAD(P)H:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01017}; TaxID=670897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2362-75.;"
NAD(P)H dehydrogenase (quinone) n=1031 Tax=Enterobacteriaceae RepID=NQOR_ECO24
wrbA; NAD(P)H:quinone oxidoreductase
L2_021_124G1_scaffold_22_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27200..27427
DNA (228bp) protein (76aa)
Uncharacterized protein YccJ n=1422 Tax=Enterobacteriaceae RepID=YCCJ_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK20823.1}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain MS 21-1).;"
L2_021_124G1_scaffold_22_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27465..28706)
DNA (1242bp) protein (414aa)
Glucose-1-phosphatase n=45 Tax=Escherichia coli RepID=D6HV51_ECOLX
Glucose-1-phosphatase {ECO:0000313|EMBL:EGU95976.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
glucose-1-phosphatase/inositol phosphatase
L2_021_124G1_scaffold_22_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28995..30254)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=7 Tax=Escherichia coli RepID=N1THV5_ECOLX
Putative uncharacterized protein {ECO:0000313|EMBL:EFE63537.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
hypothetical protein
L2_021_124G1_scaffold_22_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30514..31434
DNA (921bp) protein (307aa)
Curved DNA-binding protein n=105 Tax=Enterobacteriaceae RepID=CBPA_ECO24
cbpA; curved DNA-binding protein CbpA
Curved DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_01154, ECO:0000256|SAAS:SAAS00010094}; TaxID=1268979 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907357.;"
L2_021_124G1_scaffold_22_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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31434..31739
DNA (306bp) protein (102aa)
Chaperone modulatory protein CbpM n=14 Tax=Escherichia coli RepID=B3I7K0_ECOLX
cbpM; chaperone-modulator protein CbpM
Chaperone modulatory protein CbpM {ECO:0000256|HAMAP-Rule:MF_01155}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
L2_021_124G1_scaffold_22_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31832..32431)
DNA (600bp) protein (200aa)
Chaperone protein TorD n=246 Tax=Enterobacteriaceae RepID=TORD_ECO24
torD; chaperone protein TorD
Chaperone protein TorD {ECO:0000256|HAMAP-Rule:MF_01150, ECO:0000256|SAAS:SAAS00014573}; TaxID=1446502 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O103:H11 str. 2010C-3214.;"
L2_021_124G1_scaffold_22_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32428..34974)
DNA (2547bp) protein (849aa)
torA; trimethylamine N-oxide (TMAO) reductase I, catalytic subunit (EC:1.6.6.9)
Trimethylamine-N-oxide reductase TorA n=2 Tax=Escherichia coli RepID=E7J348_ECOLX
Trimethylamine-N-oxide reductase TorA {ECO:0000313|EMBL:ESD13918.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
L2_021_124G1_scaffold_22_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34974..36146)
DNA (1173bp) protein (391aa)
Cytochrome c-type protein TorC n=385 Tax=Enterobacteriaceae RepID=TORC_ECOLI
trimethylamine-N-oxide reductase c-type cytochrome TorC
Trimethylamine N-oxide reductase cytochrome c-type subunit {ECO:0000313|EMBL:KDV64659.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
Displaying items 1-30 of 148 in total

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