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L2_021_124G1_scaffold_33

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_124G1_scaffold_33_1
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..173)
DNA (171bp) protein (57aa)
Uncharacterized protein (Fragment) n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2IPH3_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:BAR03842.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
macrolide ABC transporter ATP-binding protein
L2_021_124G1_scaffold_33_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(170..841)
DNA (672bp) protein (224aa)
Putative DNA partition protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2I6Y6_BIFBI
VirC1-like protein {ECO:0000313|EMBL:CDS55430.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
DNA partition protein
L2_021_124G1_scaffold_33_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1045..1542)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BSA9_BIFBR
Hypothetical protein
Putative transcription regulator (WhiB-related protein) {ECO:0000313|EMBL:CDS55431.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_021_124G1_scaffold_33_4
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1539..1793)
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BRZ0_9BIFI
Chitinase {ECO:0000313|EMBL:KIM01258.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L2_021_124G1_scaffold_33_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1790..2935)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BRZ1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EPD75451.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
hypothetical protein
L2_021_124G1_scaffold_33_6
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3449..4225)
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=2 Tax=Bifidobacterium RepID=E8MU95_BIFL1
Uncharacterized protein {ECO:0000313|EMBL:EFV37050.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
hypothetical protein
L2_021_124G1_scaffold_33_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4276..4989)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Bifidobacterium breve RepID=UPI00031E8728
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAR00193.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_021_124G1_scaffold_33_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4986..5354)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VAI0_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50622.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L2_021_124G1_scaffold_33_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5354..5632)
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4VAH9_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50621.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L2_021_124G1_scaffold_33_10
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5690..6775
DNA (1086bp) protein (362aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KZM1_BIFBR
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type {ECO:0000313|EMBL:EDN81965.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Peptidyl-prolyl cis-trans isomerase
L2_021_124G1_scaffold_33_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6921..7772)
DNA (852bp) protein (284aa)
Hydrolase (HAD superfamily) n=2 Tax=Bifidobacterium bifidum RepID=E3EMF8_BIFBS
hydrolase
Hydrolase (HAD superfamily) {ECO:0000313|EMBL:ADO53394.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_124G1_scaffold_33_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7969..8475
DNA (507bp) protein (169aa)
Methionine import ATP-binding protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MFV1_BIFBI
Methionine import ATP-binding protein {ECO:0000313|EMBL:EKF16077.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
metN; methionine import ATP-binding protein
L2_021_124G1_scaffold_33_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8512..9663
DNA (1152bp) protein (384aa)
Amidohydrolase n=3 Tax=Bifidobacterium bifidum RepID=U2DQ53_BIFBI
ytnL; putative hydrolase
Amidohydrolase {ECO:0000313|EMBL:ERI83697.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ98434.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_021_124G1_scaffold_33_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9746..11443
DNA (1698bp) protein (566aa)
Glutamine-dependent NAD(+) synthetase n=2 Tax=Bifidobacterium bifidum RepID=E3EMF5_BIFBS
nadE; glutamine-dependent NAD(+) synthetase
Glutamine-dependent NAD(+) synthetase {ECO:0000313|EMBL:ADO53391.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_124G1_scaffold_33_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11521..11757
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=U2CGP5_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ98432.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_021_124G1_scaffold_33_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11877..14252
DNA (2376bp) protein (792aa)
pflB; formate acetyl transferase (EC:2.3.1.54)
Formate acetyltransferase n=5 Tax=Bifidobacterium bifidum RepID=E3EMF3_BIFBS
Formate C-acetyltransferase {ECO:0000313|EMBL:ERI83694.1}; Formate acetyltransferase {ECO:0000313|EMBL:BAQ98431.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_021_124G1_scaffold_33_17
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14444..15325
DNA (882bp) protein (294aa)
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Pyruvate formate-lyase 1-activating enzyme n=6 Tax=Bifidobacterium RepID=I3WIP9_BIFBI
L2_021_124G1_scaffold_33_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15422..16051
DNA (630bp) protein (210aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=U2DQ50_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI83692.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_021_124G1_scaffold_33_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16041..17327
DNA (1287bp) protein (429aa)
ribonuclease D (EC:3.1.13.5)
Ribonuclease D n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXL3_BIFBP
Ribonuclease D {ECO:0000313|EMBL:EKF16569.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_021_124G1_scaffold_33_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17380..18765
DNA (1386bp) protein (462aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Trigger factor n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXL2_BIFBP
tig; trigger factor, ppiase
L2_021_124G1_scaffold_33_21
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18971..20374
DNA (1404bp) protein (468aa)
Chloride channel protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXL1_BIFBP
chloride channel protein
Chloride channel protein {ECO:0000313|EMBL:CDB21960.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_021_124G1_scaffold_33_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20447..20905)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MS65_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKF14978.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_021_124G1_scaffold_33_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21211..21792
DNA (582bp) protein (194aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
ATP-dependent Clp protease proteolytic subunit n=8 Tax=Bifidobacterium RepID=E3EME7_BIFBS
clp1; ATP-dependent Clp protease proteolytic subunit 1
L2_021_124G1_scaffold_33_24
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21798..22517
DNA (720bp) protein (240aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
clpP2; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6G934_9BIFI
L2_021_124G1_scaffold_33_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22617..23930
DNA (1314bp) protein (438aa)
ATP-dependent Clp protease ATP-binding subunit (EC:3.6.1.3)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXK8_BIFBP
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_021_124G1_scaffold_33_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24360..25544
DNA (1185bp) protein (395aa)
metC; cystathionine beta-lyase (EC:4.4.1.8)
Cystathionine beta-lyase n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2LCL0_BIFBI
Cystathionine beta-lyase {ECO:0000313|EMBL:EKF15584.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_021_124G1_scaffold_33_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26263..27531
DNA (1269bp) protein (423aa)
Na(+)/H(+) antiporter NhaA n=2 Tax=Bifidobacterium bifidum RepID=E4NXK6_BIFBP
nhaA; Na+/H+ antiporter NhaA
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_124G1_scaffold_33_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27583..28524
DNA (942bp) protein (314aa)
TIGR00730 family protein n=7 Tax=Bifidobacterium bifidum RepID=E4VAG1_BIFBI
putative Rossmann fold nucleotide-binding protein
Putative Rossmann fold nucleotide-binding protein {ECO:0000313|EMBL:AFL04752.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_021_124G1_scaffold_33_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28521..29192)
DNA (672bp) protein (224aa)
O-methyl transferase n=2 Tax=Bifidobacterium bifidum RepID=I3WIN8_BIFBI
mdmC; O-methyl transferase
O-methyltransferase {ECO:0000313|EMBL:ERI83680.1}; Putative methyltransferase {ECO:0000313|EMBL:BAQ98418.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_021_124G1_scaffold_33_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29238..30209)
DNA (972bp) protein (324aa)
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CI18_BIFBI
SdhB Succinate dehydrogenase iron-sulfur protein {ECO:0000313|EMBL:KFI43243.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
sdhB; succinate dehydrogenase iron-sulfur protein
Displaying items 1-30 of 105 in total

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