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L2_021_124G1_scaffold_36

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_124G1_scaffold_36_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

133..315
DNA (183bp) protein (61aa)
Transposase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2IMG5_BIFBI
transposase
Transposase {ECO:0000313|EMBL:KEY33217.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_021_124G1_scaffold_36_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(780..908)
DNA (129bp) protein (43aa)
Transposase, mutator type n=2 Tax=Bifidobacterium bifidum RepID=E3ELL3_BIFBS
transposase, mutator type
Transposase, mutator type {ECO:0000313|EMBL:EKF15361.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_021_124G1_scaffold_36_3
unknown

Not on your lists

comp(1344..2078)
DNA (735bp) protein (245aa)

This feature has no annotations

L2_021_124G1_scaffold_36_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2082..2546)
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KJH2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10502.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_021_124G1_scaffold_36_5
unknown

Not on your lists

2925..3203
DNA (279bp) protein (93aa)

This feature has no annotations

L2_021_124G1_scaffold_36_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4438..5832
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2IMU9_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50040.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
putative membrane spanning protein
L2_021_124G1_scaffold_36_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5924..6445
DNA (522bp) protein (174aa)
Putative transposase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2I5K4_BIFBI
Putative transposase {ECO:0000313|EMBL:EKE50039.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L2_021_124G1_scaffold_36_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6611..6802)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HRJ3_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50038.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
putative transposase
L2_021_124G1_scaffold_36_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7210..7521)
DNA (312bp) protein (104aa)
Transcriptional regulator containing cell envelope-related transcriptional attenuator domain n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EPS9_BIFBS
transcriptional regulator containing cell envelope-related transcriptional attenuator domain
Cell envelope-like function transcriptional attenuator common domain protein {ECO:0000313|EMBL:ERI82178.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ97586.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_021_124G1_scaffold_36_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7667..8479)
DNA (813bp) protein (271aa)
Cell envelope-like function transcriptional attenuator common domain protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CDT9_BIFBI
Cell envelope-like function transcriptional attenuator common domain protein {ECO:0000313|EMBL:KFI42468.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
transcriptional regulator containing cell envelope-related transcriptional attenuator domain
L2_021_124G1_scaffold_36_11
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8931..10511
DNA (1581bp) protein (527aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NZS9_BIFBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB22128.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_021_124G1_scaffold_36_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10758..11753)
DNA (996bp) protein (332aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=K2MUM3_BIFBI
hypothetical protein
G5 domain protein {ECO:0000313|EMBL:ERI82182.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ97588.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_021_124G1_scaffold_36_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11987..12349)
DNA (363bp) protein (121aa)
Thioredoxin n=4 Tax=Bifidobacterium bifidum RepID=E4NZT1_BIFBP
trx; thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_021_124G1_scaffold_36_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12548..13174
DNA (627bp) protein (209aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=I3WGF1_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI42472.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_021_124G1_scaffold_36_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13320..14174
DNA (855bp) protein (285aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CCD9_BIFBI
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:ERI82185.1}; Putative alpha/beta hydrolase {ECO:0000313|EMBL:BAQ97591.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hydrolase, alpha/beta fold family
L2_021_124G1_scaffold_36_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14288..15379
DNA (1092bp) protein (364aa)
Putative phosphohydrolase {ECO:0000313|EMBL:KFI42474.1}; EC=3.6.1.22 {ECO:0000313|EMBL:KFI42474.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Hydrolase, NUDIX family n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DL00_BIFBI
phosphohydrolase
L2_021_124G1_scaffold_36_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15457..17307
DNA (1851bp) protein (617aa)
ErfK/YbiS/YcfS/YnhG n=2 Tax=Bifidobacterium bifidum RepID=E4V813_BIFBI
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:EFR49755.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L2_021_124G1_scaffold_36_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17454..17861
DNA (408bp) protein (136aa)
Glycine cleavage system H protein n=6 Tax=Bifidobacterium bifidum RepID=E3EPT8_BIFBS
gcvH; glycine cleavage system H protein GcvH
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_021_124G1_scaffold_36_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17989..19338
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HWF3_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50772.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L2_021_124G1_scaffold_36_20
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19394..21856
DNA (2463bp) protein (821aa)
ptrB; protease II PtrB (EC:3.4.21.83)
PtrB Protease II n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6H9A3_9BIFI
PtrB Protease II {ECO:0000313|EMBL:CDB22817.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_021_124G1_scaffold_36_21
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22431..23462
DNA (1032bp) protein (344aa)
3-isopropylmalate dehydrogenase n=6 Tax=Bifidobacterium RepID=E3EPU2_BIFBS
leuB; 3-isopropylmalate dehydrogenase
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:CDB22815.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_021_124G1_scaffold_36_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24221..24859
DNA (639bp) protein (213aa)
LplA Lipoate-protein ligase A {ECO:0000313|EMBL:KFI42480.1}; EC=2.7.7.63 {ECO:0000313|EMBL:KFI42480.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Biotin/lipoate A/B protein ligase family protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DR70_BIFBI
lplA; Lipoate-protein ligase A
L2_021_124G1_scaffold_36_23
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25029..25748
DNA (720bp) protein (240aa)
transcription regulator, crp family (EC:3.1.1.5)
Transcription regulator, crp family n=6 Tax=Bifidobacterium RepID=E4NZU1_BIFBP
Transcription regulator crp family {ECO:0000313|EMBL:CDB22396.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_021_124G1_scaffold_36_24
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25923..28232
DNA (2310bp) protein (770aa)
Glycosyl transferase family 51 n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GDF4_9BIFI
Glycosyl transferase family 51 {ECO:0000313|EMBL:CDB22395.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
glycosyl transferase family protein
L2_021_124G1_scaffold_36_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28520..29653
DNA (1134bp) protein (378aa)
baiC; NADH-dependent flavin oxidoreductase BaiC (EC:1.6.99.1)
Oxidoreductase, FAD/FMN-binding protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CCF9_BIFBI
Oxidoreductase, FAD/FMN-binding protein {ECO:0000313|EMBL:ERI82200.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_021_124G1_scaffold_36_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29723..30880)
DNA (1158bp) protein (386aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|SAAS:SAAS00084821}; EC=1.3.5.2 {ECO:0000256|SAAS:SAAS00084821};; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Dihydroorotate dehydrogenase n=8 Tax=Bifidobacterium RepID=E3ELT8_BIFBS
pyrD2; dihydroorotate dehydrogenase
L2_021_124G1_scaffold_36_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31074..31877
DNA (804bp) protein (268aa)
Transcriptional regulator, DeoR family n=7 Tax=Bifidobacterium RepID=E3ELT9_BIFBS
DeoR family transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EFR49766.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_021_124G1_scaffold_36_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31882..33132
DNA (1251bp) protein (417aa)
Galactose-1-phosphate uridylyltransferase n=6 Tax=Bifidobacterium RepID=E3ELU0_BIFBS
galT1; galactose-1-phosphate uridylyltransferase
Galactose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:ADO52636.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_124G1_scaffold_36_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33222..34472
DNA (1251bp) protein (417aa)
galK; galactokinase GalK (EC:2.7.1.6)
Galactokinase n=8 Tax=Bifidobacterium RepID=E3ELU1_BIFBS
Galactokinase {ECO:0000256|SAAS:SAAS00025843}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_021_124G1_scaffold_36_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34694..36019)
DNA (1326bp) protein (442aa)
Putative metabolite transport protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WGG7_BIFBI
shiA; putative metabolite transport protein
Putative metabolite transport protein {ECO:0000313|EMBL:AFL03980.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Displaying items 1-30 of 81 in total

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