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L2_021_124G1_scaffold_65

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_124G1_scaffold_65_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..645)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2M427_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKF16756.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
hypothetical protein
L2_021_124G1_scaffold_65_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(996..1946)
DNA (951bp) protein (317aa)
Bile salt hydrolase {ECO:0000313|EMBL:AAT11512.1}; Cbh Choloylglycine hydrolase {ECO:0000313|EMBL:KFI42912.1}; EC=3.5.1.24 {ECO:0000313|EMBL:KFI42912.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Choloylglycine hydrolase n=5 Tax=Bifidobacterium RepID=K2HTC3_BIFBI
cbh; Choloylglycine hydrolase
L2_021_124G1_scaffold_65_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2080..2379)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V9F0_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50242.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L2_021_124G1_scaffold_65_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2815..3687)
DNA (873bp) protein (291aa)
Carbon-nitrogen hydrolase n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2LG91_BIFBI
Carbon-nitrogen hydrolase {ECO:0000313|EMBL:EKF16759.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
carbon-nitrogen hydrolase
L2_021_124G1_scaffold_65_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3758..4720)
DNA (963bp) protein (321aa)
ABC transporter ATP-binding protein (EC:3.6.3.25)
ABC transporter ATP-binding protein n=5 Tax=Bifidobacterium bifidum RepID=K2H9N7_BIFBI
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EKE50646.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_021_124G1_scaffold_65_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4776..6026)
DNA (1251bp) protein (417aa)
glycosyltransferase (EC:2.4.1.13)
Glycosyltransferase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P1F7_BIFBP
Glycosyltransferase {ECO:0000313|EMBL:EKE50647.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_021_124G1_scaffold_65_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6174..6647)
DNA (474bp) protein (158aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=I3WHS8_BIFBI
hypothetical protein
Membrane spanning protein {ECO:0000313|EMBL:KFI42907.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_021_124G1_scaffold_65_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6996..8528)
DNA (1533bp) protein (511aa)
gltD; glutamate synthase small chain GltD (EC:1.4.1.14)
GltD Glutamate synthase [NADPH] small chain n=6 Tax=Bifidobacterium RepID=E4P1F5_BIFBP
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EFR50237.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_021_124G1_scaffold_65_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8530..13116)
DNA (4587bp) protein (1529aa)
Glutamate synthase [NADPH], large subunit {ECO:0000313|EMBL:EFR50236.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EFR50236.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
gltB; glutamate synthase large chain GltB (EC:1.4.7.1)
Glutamate synthase [NADPH], large subunit n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V9E4_BIFBI
L2_021_124G1_scaffold_65_10
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13381..15471)
DNA (2091bp) protein (697aa)
Translation elongation factor n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2H9P0_BIFBI
Translation elongation factor {ECO:0000313|EMBL:CDB23341.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
translation elongation factor
L2_021_124G1_scaffold_65_11
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15668..17236)
DNA (1569bp) protein (523aa)
aminotransferase (EC:2.6.1.1)
Aminotransferase n=2 Tax=Bifidobacterium bifidum RepID=E4P1F2_BIFBP
Aminotransferase {ECO:0000313|EMBL:CDB23338.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_021_124G1_scaffold_65_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17554..17694
DNA (141bp) protein (47aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=K2HTC9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53074.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_124G1_scaffold_65_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17751..19145)
DNA (1395bp) protein (465aa)
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EM66_BIFBS
hemN; oxygen-independent coproporphyrinogen III oxidase
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:ADO53073.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_124G1_scaffold_65_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19160..21040)
DNA (1881bp) protein (627aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
lepA; GTP-binding protein LepA (EC:2.7.7.4)
Elongation factor 4 n=6 Tax=Bifidobacterium RepID=E4V9D9_BIFBI
L2_021_124G1_scaffold_65_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


21249..21509
DNA (261bp) protein (87aa)
30S ribosomal protein S20 n=7 Tax=Bifidobacterium RepID=E3EM64_BIFBS
rpsT; 30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_021_124G1_scaffold_65_16
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21646..22404)
DNA (759bp) protein (253aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=E4V9D7_BIFBI
hypothetical protein
Conserved hypothetical membrane spanning protein in uncharacterized protein family UPF0126 {ECO:0000313|EMBL:CDB23325.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_021_124G1_scaffold_65_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22643..22987)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CCR7_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI42897.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_021_124G1_scaffold_65_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23182..23463
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2IPL1_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50660.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_021_124G1_scaffold_65_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23585..24712)
DNA (1128bp) protein (376aa)
ilvE; branched-chain amino acid aminotransferase IlvE (EC:2.6.1.42)
IlvE Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:KFI42895.1}; EC=2.6.1.42 {ECO:0000313|EMBL:KFI42895.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Branched-chain amino acid aminotransferase n=3 Tax=Bifidobacterium RepID=K2H9P8_BIFBI
L2_021_124G1_scaffold_65_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(24928..25563)
DNA (636bp) protein (212aa)
50S ribosomal protein L25 n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WHR5_BIFBI
50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_021_124G1_scaffold_65_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25879..26871
DNA (993bp) protein (331aa)
Hydrolase of the alpha/beta superfamily protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GPX5_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53066.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_124G1_scaffold_65_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27010..28455)
DNA (1446bp) protein (482aa)
pntB; NAD(P) transhydrogenase subunit beta (EC:1.6.1.2)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
NAD(P) transhydrogenase subunit beta n=6 Tax=Bifidobacterium RepID=E4P1E2_BIFBP
L2_021_124G1_scaffold_65_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28455..28769)
DNA (315bp) protein (105aa)
pntAB; NAD(P) transhydrogenase subunit alpha part 2 (EC:1.6.1.2)
NAD(P) transhydrogenase alpha2 subunit n=7 Tax=Bifidobacterium RepID=E3EM57_BIFBS
NAD(P) transhydrogenase subunit alpha {ECO:0000313|EMBL:EKF15071.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_021_124G1_scaffold_65_24
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28773..29912)
DNA (1140bp) protein (380aa)
pntAA; NAD(P) transhydrogenase subunit alpha part 1 (EC:1.6.1.2)
NAD(P) transhydrogenase subunit alpha subunit n=8 Tax=Bifidobacterium RepID=E3EM56_BIFBS
PntA1 NAD(P) transhydrogenase subunit alpha part 1 {ECO:0000313|EMBL:CDB23312.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_021_124G1_scaffold_65_25
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30132..32168
DNA (2037bp) protein (679aa)
Long-chain-fatty-acid--CoA ligase n=2 Tax=Bifidobacterium RepID=R6GPX1_9BIFI
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CDB23311.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
fadD3; long-chain-fatty-acid--CoA ligase
L2_021_124G1_scaffold_65_26
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32269..33279)
DNA (1011bp) protein (337aa)
GTPase Era n=6 Tax=Bifidobacterium RepID=I3WHQ9_BIFBI
era; GTP-binding protein
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_021_124G1_scaffold_65_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33328..34746)
DNA (1419bp) protein (473aa)
Hemolysin-like protein n=4 Tax=Bifidobacterium bifidum RepID=I3WHQ8_BIFBI
hypothetical protein
Membrane spanning protein {ECO:0000313|EMBL:KFI42887.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_021_124G1_scaffold_65_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34824..35369)
DNA (546bp) protein (182aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Endoribonuclease YbeY n=8 Tax=Bifidobacterium RepID=E3EM52_BIFBS
putative metalloprotease
L2_021_124G1_scaffold_65_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35366..36451)
DNA (1086bp) protein (362aa)
PhoH PhoH protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P1D5_BIFBP
phoH; PhoH protein
Phosphate starvation-induced protein {ECO:0000313|EMBL:AFL04419.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_021_124G1_scaffold_65_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36460..36798)
DNA (339bp) protein (113aa)
HIT family protein n=6 Tax=Bifidobacterium RepID=E4P1D4_BIFBP
putative HIT family hydrolase
HIT family protein {ECO:0000313|EMBL:KFI42884.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Displaying items 1-30 of 67 in total

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