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L2_021_124G1_scaffold_69

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_124G1_scaffold_69_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..875)
DNA (873bp) protein (291aa)
Integrase core domain n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6D9T8_BIFLN
Integrase core domain.
Integrase core domain {ECO:0000313|EMBL:CBK70941.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L2_021_124G1_scaffold_69_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(850..1194)
DNA (345bp) protein (115aa)
Transposase n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6D9T9_BIFLN
transposase
Transposase {ECO:0000313|EMBL:KEY29964.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L2_021_124G1_scaffold_69_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1580..1714)
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DXF9_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI84541.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_021_124G1_scaffold_69_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1929..2720
DNA (792bp) protein (264aa)
Restriction endonuclease R.BbrI n=5 Tax=Bifidobacterium RepID=C1J0P4_BIFBU
Type II restriction-modification system restriction subunit
Uncharacterized protein {ECO:0000313|EMBL:ERI84542.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_021_124G1_scaffold_69_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2956..3873
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CKE6_BIFBR
ImpB/MucB/SamB family protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ20437.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_021_124G1_scaffold_69_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3873..4376
DNA (504bp) protein (168aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=U2C261_BIFBR
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ20436.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_021_124G1_scaffold_69_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5003..5572
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y0K7_BIFBU
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE94919.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_021_124G1_scaffold_69_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6046..6693
DNA (648bp) protein (216aa)
Phosphopantetheinyl transferase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y0K6_BIFBU
4'-phosphopantetheinyl transferase {ECO:0000313|EMBL:KHD94873.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
Phosphopantetheinyl transferase
L2_021_124G1_scaffold_69_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6642..7277)
DNA (636bp) protein (212aa)
Transcriptional regulator, TetR family n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BSF8_BIFBR
Transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AHJ19499.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L2_021_124G1_scaffold_69_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7302..7631)
DNA (330bp) protein (110aa)
Multi-domain protein possibly involved in fatty acids or polyketide biosynthesis n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GNQ6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KHD94871.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
Multi-domain protein possibly involved in fatty acids or polyketide biosynthesis
L2_021_124G1_scaffold_69_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7647..9215)
DNA (1569bp) protein (523aa)
Antiseptic resistance protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2IMH3_BIFBI
Antiseptic resistance protein {ECO:0000313|EMBL:EKE49945.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
qacA; antiseptic resistance protein
L2_021_124G1_scaffold_69_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10256..11638)
DNA (1383bp) protein (461aa)
Divergent AAA domain protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C6I1_BIFBA
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AHJ20429.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_021_124G1_scaffold_69_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11781..12620
DNA (840bp) protein (280aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=B7GT99_BIFLS
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ51322.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_021_124G1_scaffold_69_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12786..13283
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXM1_BIFLJ
Uncharacterized protein {ECO:0000313|EMBL:KFI72921.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_021_124G1_scaffold_69_15
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13951..14727)
DNA (777bp) protein (259aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
Glutamate--tRNA ligase n=14 Tax=Bifidobacterium RepID=SYE_BIFLD
gltX; glutamyl-tRNA synthetase
L2_021_124G1_scaffold_69_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14697..15308)
DNA (612bp) protein (204aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Glutamate--tRNA ligase n=2 Tax=Bifidobacterium longum subsp. longum RepID=E4R0R1_BIFLM
glutamyl-tRNA synthase
L2_021_124G1_scaffold_69_17
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15491..15589)
DNA (99bp) protein (33aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MWZ8_BIFL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY96013.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_021_124G1_scaffold_69_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15865..17046
DNA (1182bp) protein (394aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MWZ7_BIFL1
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ70300.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_021_124G1_scaffold_69_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17164..18081)
DNA (918bp) protein (306aa)
Aldose 1-epimerase-like protein n=13 Tax=Bifidobacterium RepID=B3DU90_BIFLD
hypothetical protein
Aldose 1-epimerase-like protein {ECO:0000313|EMBL:ACD98709.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_021_124G1_scaffold_69_20
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18160..19119)
DNA (960bp) protein (320aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XYP9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFV37228.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
hypothetical protein
L2_021_124G1_scaffold_69_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19335..19994)
DNA (660bp) protein (220aa)
Fructose-2,6-bisphosphatase n=9 Tax=Bifidobacterium RepID=D6DAK7_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24305.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_021_124G1_scaffold_69_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20256..21701
DNA (1446bp) protein (482aa)
Major Facilitator Superfamily n=10 Tax=Bifidobacterium longum RepID=D6DAK8_BIFLN
transport protein
Transporter, major facilitator family protein {ECO:0000313|EMBL:EIJ22077.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_021_124G1_scaffold_69_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21749..22324)
DNA (576bp) protein (192aa)
GtrA family protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GT89_BIFLS
hypothetical protein
Narrowly conserved hypothetical membrane protein {ECO:0000313|EMBL:AAN24307.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_021_124G1_scaffold_69_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22487..22834
DNA (348bp) protein (116aa)
Macrophage migration inhibitory factor n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B3J4_BIFLN
MIF domain protein
MIF domain protein {ECO:0000313|EMBL:AIW43202.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_124G1_scaffold_69_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23231..24748)
DNA (1518bp) protein (506aa)
Formyltetrahydrofolate synthetase n=9 Tax=Bifidobacterium RepID=B3DU97_BIFLD
thfS2; thfs2
Putative formate--tetrahydrofolate ligase {ECO:0000313|EMBL:EEI81604.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_021_124G1_scaffold_69_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24880..26481)
DNA (1602bp) protein (534aa)
Dipeptidase n=12 Tax=Bifidobacterium RepID=PEPD_BIFLO
Dipeptidase {ECO:0000313|EMBL:BAJ65826.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
dipeptidase
L2_021_124G1_scaffold_69_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26624..27178)
DNA (555bp) protein (185aa)
Phospholipid-binding protein n=6 Tax=Bifidobacterium RepID=F8AU43_BIFLN
phospholipid-binding protein
Raf-like protein {ECO:0000313|EMBL:EEQ54541.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L2_021_124G1_scaffold_69_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27297..28448)
DNA (1152bp) protein (384aa)
DNA polymerase III subunit delta' (EC:2.7.7.7)
Possible DNA polymerase III delta prime subunit n=5 Tax=Bifidobacterium RepID=Q8G6Z7_BIFLO
DNA polymerase III subunit delta {ECO:0000313|EMBL:KEY23907.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_021_124G1_scaffold_69_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28445..29065)
DNA (621bp) protein (207aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Thymidylate kinase n=8 Tax=Bifidobacterium RepID=E8MGC0_BIFL2
thymidylate kinase
L2_021_124G1_scaffold_69_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29343..32429)
DNA (3087bp) protein (1029aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
DNA topoisomerase 1 n=8 Tax=Bifidobacterium RepID=Q8G6Z5_BIFLO
DNA topoisomerase I
Displaying items 1-30 of 78 in total

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