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L2_021_124G1_scaffold_137

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_124G1_scaffold_137_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

741..1541
DNA (801bp) protein (267aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=I3WI26_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53172.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_124G1_scaffold_137_2
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1663..2607)
DNA (945bp) protein (315aa)
bacA; bacitracin resistance protein BacA (EC:3.6.1.27)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Undecaprenyl-diphosphatase n=8 Tax=Bifidobacterium RepID=E3EP66_BIFBS
L2_021_124G1_scaffold_137_3
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2770..3537
DNA (768bp) protein (256aa)
Fructosamine kinase family protein n=6 Tax=Bifidobacterium RepID=E4NX18_BIFBP
fructosamine-3-kinase
Fructosamine kinase family protein {ECO:0000313|EMBL:CDB23050.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_021_124G1_scaffold_137_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3674..4825)
DNA (1152bp) protein (384aa)
Chaperone protein DnaJ n=9 Tax=Bifidobacterium RepID=E3EQ25_BIFBS
dnaJ; molecular chaperone DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_021_124G1_scaffold_137_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4878..6134)
DNA (1257bp) protein (419aa)
Heat-inducible transcription repressor HrcA n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EQ26_BIFBS
hrcA; Heat-inducible transcription repressor HrcA
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_124G1_scaffold_137_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6482..8590
DNA (2109bp) protein (703aa)
Transketolase {ECO:0000313|EMBL:EFR50401.1}; EC=2.2.1.1 {ECO:0000313|EMBL:EFR50401.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Transketolase n=3 Tax=Bifidobacterium bifidum RepID=E3EQ27_BIFBS
tkt; transketolase
L2_021_124G1_scaffold_137_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8723..9826
DNA (1104bp) protein (368aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Transaldolase n=8 Tax=Bifidobacterium bifidum RepID=E3EQ28_BIFBS
tal; transaldolase
L2_021_124G1_scaffold_137_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9940..10881
DNA (942bp) protein (314aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=U2CEI1_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:BAQ98222.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_021_124G1_scaffold_137_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11046..12458
DNA (1413bp) protein (471aa)
Branched-chain amino acid transport system II carrier protein n=3 Tax=Bifidobacterium bifidum RepID=E3EQ30_BIFBS
branched-chain amino acid transport system II carrier protein
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:EKF16429.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_021_124G1_scaffold_137_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13012..13344)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CD09_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI82425.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_021_124G1_scaffold_137_11
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13325..14695)
DNA (1371bp) protein (457aa)
Na+ driven multidrug efflux pump n=2 Tax=Bifidobacterium RepID=K2I667_BIFBI
Na+ driven multidrug efflux pump {ECO:0000313|EMBL:CDB21998.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Na+ driven multidrug efflux pump
L2_021_124G1_scaffold_137_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14692..15528)
DNA (837bp) protein (279aa)
putative hydrolase (EC:3.1.3.18)
Haloacid dehalogenase domain protein hydrolase, type 3 n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EQ33_BIFBS
DNA polymerase III, beta chain {ECO:0000313|EMBL:KFI43072.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_021_124G1_scaffold_137_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15588..16538)
DNA (951bp) protein (317aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L-lactate dehydrogenase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2H8H9_BIFBI
ldh3; L-lactate dehydrogenase
L2_021_124G1_scaffold_137_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16646..16894)
DNA (249bp) protein (83aa)
Preprotein translocase, SecG subunit n=8 Tax=Bifidobacterium RepID=E3EQ35_BIFBS
secG; protein translocase subunit SecG
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:ADO53185.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_124G1_scaffold_137_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16973..17767)
DNA (795bp) protein (265aa)
tpiA; triose-phosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Triosephosphate isomerase n=6 Tax=Bifidobacterium bifidum RepID=E3EQ36_BIFBS
L2_021_124G1_scaffold_137_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17836..19041)
DNA (1206bp) protein (402aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Phosphoglycerate kinase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WI42_BIFBI
L2_021_124G1_scaffold_137_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19199..20170)
DNA (972bp) protein (324aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WI43_BIFBI
whiA; transcriptional regulator
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_021_124G1_scaffold_137_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20337..21281)
DNA (945bp) protein (315aa)
UPF0042 nucleotide-binding protein BBB_0965 n=4 Tax=Bifidobacterium bifidum RepID=I3WI44_BIFBI
hypothetical protein
Nucleotide-binding protein BBB_0965 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_021_124G1_scaffold_137_19
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21281..22243)
DNA (963bp) protein (321aa)
aroE; shikimate 5-dehydrogenase AroE (EC:1.1.1.25)
AroE Shikimate 5-dehydrogenase n=2 Tax=Bifidobacterium RepID=E4NX33_BIFBP
AroE Shikimate 5-dehydrogenase {ECO:0000313|EMBL:CDB23224.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_021_124G1_scaffold_137_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22437..24779)
DNA (2343bp) protein (781aa)
UvrABC system protein C n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HSC4_BIFBI
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
uvrC; excinuclease ABC subunit C
L2_021_124G1_scaffold_137_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24776..27793)
DNA (3018bp) protein (1006aa)
UvrABC system protein A n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CEG6_BIFBI
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
uvrA; excinuclease ABC subunit A
L2_021_124G1_scaffold_137_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28013..28654)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DLJ6_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI82412.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_021_124G1_scaffold_137_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28708..29112)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2H8I9_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50306.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L2_021_124G1_scaffold_137_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29552..30217
DNA (666bp) protein (222aa)
two-component response regulator (EC:2.7.13.3)
Two-component response regulator n=5 Tax=Bifidobacterium bifidum RepID=E4NX38_BIFBP
Two-component response regulator {ECO:0000313|EMBL:EKF15324.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_021_124G1_scaffold_137_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30214..31653
DNA (1440bp) protein (480aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
sensory transduction protein kinase (EC:2.7.13.3)
Sensory transduction protein kinase n=2 Tax=Bifidobacterium bifidum RepID=K2I678_BIFBI
L2_021_124G1_scaffold_137_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31682..32431)
DNA (750bp) protein (250aa)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EQ48_BIFBS
D-alanyl-D-alanine carboxypeptidase
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:ADO53198.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_124G1_scaffold_137_27
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32663..34264
DNA (1602bp) protein (534aa)
ATP-binding protein of ABC transporter system n=7 Tax=Bifidobacterium RepID=E3EQ49_BIFBS
ydiF; ABC transporter ATP-binding protein
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:CDB23232.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_021_124G1_scaffold_137_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34675..35697)
DNA (1023bp) protein (341aa)
galE; UDP-glucose 4-epimerase GalE (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HV01_BIFBI
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EKE50312.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_021_124G1_scaffold_137_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35743..37257)
DNA (1515bp) protein (505aa)
galT2; galactose-1-phosphate uridylyltransferase GalT2 (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Galactose-1-phosphate uridylyltransferase n=4 Tax=Bifidobacterium bifidum RepID=E4NX43_BIFBP
L2_021_124G1_scaffold_137_30
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37257..38345)
DNA (1089bp) protein (363aa)
Mucin desulfatase n=6 Tax=Bifidobacterium RepID=E3EQ52_BIFBS
nahK; N-acetylhexosamine-1-kinase NahK
N-acetylhexosamine-1-kinase NahK {ECO:0000313|EMBL:CDB23235.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Displaying items 1-30 of 33 in total

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