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L2_021_124G1_scaffold_139

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_124G1_scaffold_139_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

767..2233
DNA (1467bp) protein (489aa)
ugpA; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
Putative UTP--glucose-1-phosphateuridylyl transferase {ECO:0000313|EMBL:AFL04496.1}; EC=2.7.7.9 {ECO:0000313|EMBL:AFL04496.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
UgpA UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NWX4_BIFBP
L2_021_124G1_scaffold_139_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2371..4308
DNA (1938bp) protein (646aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=K2I5N0_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50059.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L2_021_124G1_scaffold_139_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4313..4639
DNA (327bp) protein (109aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=I3WHY5_BIFBI
hypothetical protein
Conserved hypothetical secreted protein {ECO:0000313|EMBL:ADO53131.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_124G1_scaffold_139_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4748..7306
DNA (2559bp) protein (853aa)
Helicase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2H7R8_BIFBI
Helicase {ECO:0000313|EMBL:EKE50061.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
helY; helicase
L2_021_124G1_scaffold_139_5
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7430..7777
DNA (348bp) protein (116aa)
RNA polymerase-binding protein RbpA n=7 Tax=Bifidobacterium RepID=E3EP26_BIFBS
hypothetical protein
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_021_124G1_scaffold_139_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7788..8522
DNA (735bp) protein (245aa)
putative hydrolase or phosphatase (EC:3.1.3.5)
Putative hydrolase or phosphatase {ECO:0000313|EMBL:AFL04501.1}; EC=3.1.3.5 {ECO:0000313|EMBL:AFL04501.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Putative hydrolase or phosphatase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WHY8_BIFBI
L2_021_124G1_scaffold_139_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8681..9274)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WHY9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL04502.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_021_124G1_scaffold_139_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9352..9633
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MUJ1_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKF15648.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
hypothetical protein
L2_021_124G1_scaffold_139_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9782..10267
DNA (486bp) protein (162aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=I3WHZ1_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53136.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_124G1_scaffold_139_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10271..10921
DNA (651bp) protein (217aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=I3WHZ2_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53137.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_124G1_scaffold_139_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10946..11155)
DNA (210bp) protein (70aa)
Phage integrase n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2M3Q1_BIFBI
Phage integrase {ECO:0000313|EMBL:EKF15650.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
phage integrase
L2_021_124G1_scaffold_139_12
unknown

Not on your lists

11315..11446
DNA (132bp) protein (44aa)

This feature has no annotations

L2_021_124G1_scaffold_139_13
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11517..11945
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GPJ4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB23186.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L2_021_124G1_scaffold_139_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11801..12178)
DNA (378bp) protein (126aa)
Anaerobic C4-dicarboxylate transport protein n=3 Tax=Bifidobacterium bifidum RepID=I3WHZ4_BIFBI
anaerobic C4-dicarboxylate transport protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53140.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_021_124G1_scaffold_139_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12193..12867)
DNA (675bp) protein (225aa)
Transcriptional regulator n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HUU9_BIFBI
Transcriptional regulator {ECO:0000313|EMBL:EKE50252.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
transcriptional regulator
L2_021_124G1_scaffold_139_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12962..13399)
DNA (438bp) protein (146aa)
Signal transduction protein GarA n=4 Tax=Bifidobacterium bifidum RepID=E3EP35_BIFBS
garA; putative signal transduction protein
Oxoglutarate dehydrogenase inhibitor {ECO:0000313|EMBL:EFR50366.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_021_124G1_scaffold_139_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13405..14226)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2I644_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50254.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L2_021_124G1_scaffold_139_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14233..14565)
DNA (333bp) protein (111aa)
Small basic protein n=8 Tax=Bifidobacterium RepID=E4NWY8_BIFBP
hypothetical protein
Small basic protein {ECO:0000313|EMBL:KFI43035.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_021_124G1_scaffold_139_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14566..15537)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WHZ9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL04512.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_021_124G1_scaffold_139_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15527..16180)
DNA (654bp) protein (218aa)
pgsA; putativeCDP-diacylglycerol--glycerol-3-phosphate3-phosphatidyl-transferase (EC:2.7.8.5)
PgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:KFI43037.1}; EC=2.7.8.5 {ECO:0000313|EMBL:KFI43037.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
PutativeCDP-diacylglycerol--glycerol-3-phosphate3-phosphatidyl-transferase n=3 Tax=Bifidobacterium bifidum RepID=I3WI00_BIFBI
L2_021_124G1_scaffold_139_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16197..17048)
DNA (852bp) protein (284aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
ATP phosphoribosyltransferase n=7 Tax=Bifidobacterium RepID=E3EP40_BIFBS
hisG; ATP phosphoribosyltransferase
L2_021_124G1_scaffold_139_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17083..17346)
DNA (264bp) protein (88aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Phosphoribosyl-ATP pyrophosphatase n=8 Tax=Bifidobacterium RepID=E3EP41_BIFBS
hisE; phosphoribosyl-ATP pyrophosphohydrolase
L2_021_124G1_scaffold_139_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17458..18123)
DNA (666bp) protein (222aa)
rpe; ribulose-phosphate 3-epimerase Rpe (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Ribulose-phosphate 3-epimerase n=9 Tax=Bifidobacterium RepID=E3EP42_BIFBS
L2_021_124G1_scaffold_139_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18251..19243)
DNA (993bp) protein (331aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Prolipoprotein diacylglyceryl transferase n=2 Tax=Bifidobacterium bifidum RepID=E4NWZ4_BIFBP
lgt; prolipo protein diacylglyceryl transferase
L2_021_124G1_scaffold_139_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19341..20213)
DNA (873bp) protein (291aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Tryptophan synthase alpha chain n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EP44_BIFBS
trpA; tryptophan synthase subunit alpha
L2_021_124G1_scaffold_139_26
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20246..22333)
DNA (2088bp) protein (696aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|SAAS:SAAS00046689}; EC=4.1.1.48 {ECO:0000256|SAAS:SAAS00046705};; EC=4.2.1.20 {ECO:0000256|SAAS:SAAS00015859};; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
trpB; tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta subunit n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GCI3_9BIFI
L2_021_124G1_scaffold_139_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22522..24657)
DNA (2136bp) protein (712aa)
Ribosome biogenesis GTPase Der n=2 Tax=Bifidobacterium bifidum RepID=E4V9T5_BIFBI
GTPase Der {ECO:0000256|SAAS:SAAS00038180}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
GTP-binding protein
L2_021_124G1_scaffold_139_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24654..25430)
DNA (777bp) protein (259aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Pseudouridine synthase n=8 Tax=Bifidobacterium RepID=E3EP47_BIFBS
rluB; ribosomal large subunit pseudouridine synthase B
L2_021_124G1_scaffold_139_29
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25597..26502
DNA (906bp) protein (302aa)
Major intrinsic protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2H8F6_BIFBI
major intrinsic protein
Major intrinsic protein {ECO:0000313|EMBL:CDB23007.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_021_124G1_scaffold_139_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26482..26775)
DNA (294bp) protein (98aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=I3WI10_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53156.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Displaying items 1-30 of 43 in total

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