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L2_021_124G1_scaffold_142

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Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_124G1_scaffold_142_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..405)
DNA (405bp) protein (135aa)
gadB; glutamate decarboxylase B, PLP-dependent (EC:4.1.1.15)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; Flags: Fragment;; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
Glutamate decarboxylase n=5 Tax=Escherichia coli PF2_ECOLX">RepID=M2NPF2_ECOLX
L2_021_124G1_scaffold_142_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(767..3550)
DNA (2784bp) protein (928aa)
Peptidase, M16 family n=36 Tax=Escherichia coli RepID=D8E9Z9_ECOLX
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:KEO01528.1}; TaxID=1444219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C1.;"
putative peptidase
L2_021_124G1_scaffold_142_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3607..5979)
DNA (2373bp) protein (791aa)
TonB-dependent receptor plug domain protein n=17 Tax=Escherichia coli RepID=D8EA00_ECOLX
TonB-dependent Receptor Plug domain protein {ECO:0000313|EMBL:KEJ63035.1}; TaxID=1444223 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-267-03_S4_C1.;"
yddB; porin protein
L2_021_124G1_scaffold_142_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6017..7702)
DNA (1686bp) protein (562aa)
ABC transporter, ATP-binding protein n=27 Tax=Escherichia coli RepID=D8EA01_ECOLX
Inner membrane ABC transporter ATP-binding protein YddA {ECO:0000313|EMBL:KEO01530.1}; TaxID=1444219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C1.;"
putative ABC transporter ATP-binding protein
L2_021_124G1_scaffold_142_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7993..9150)
DNA (1158bp) protein (386aa)
Anaerobic sulfatase maturase {ECO:0000313|EMBL:END92519.1}; EC=1.1.99.- {ECO:0000313|EMBL:END92519.1};; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.13.;"
Radical SAM domain protein n=118 Tax=Escherichia coli RepID=A7ZLU6_ECO24
radical SAM protein
L2_021_124G1_scaffold_142_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9202..10884)
DNA (1683bp) protein (561aa)
Arylsulfatase {ECO:0000313|EMBL:EFU33887.1}; EC=3.1.6.- {ECO:0000313|EMBL:EFU33887.1};; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
Uncharacterized sulfatase YdeN n=489 Tax=Enterobacteriaceae RepID=YDEN_ECOLI
ydeN; hypothetical protein
L2_021_124G1_scaffold_142_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11286..12047)
DNA (762bp) protein (254aa)
Transcriptional regulator, AraC family n=97 Tax=Escherichia coli RepID=A7ZLU7_ECO24
transcriptional regulator YdeO
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:KEN49229.1}; TaxID=1444091 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 6-537-08_S1_C2.;"
L2_021_124G1_scaffold_142_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12122..12355)
DNA (234bp) protein (78aa)
Two-component-system connector protein SafA n=1 Tax=Escherichia coli UMEA 3671-1 RepID=T9PZ80_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EFK45020.1}; TaxID=679206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 119-7.;"
hypothetical protein
L2_021_124G1_scaffold_142_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12567..14846)
DNA (2280bp) protein (760aa)
Molybdopterin oxidoreductase, alpha subunit n=39 Tax=Escherichia coli RepID=A7ZLU8_ECO24
putative oxidoreductase
Oxidoreductase alpha (Molybdopterin) subunit {ECO:0000313|EMBL:EGI45162.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
L2_021_124G1_scaffold_142_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15180..16094)
DNA (915bp) protein (305aa)
Protein FimH homolog n=93 Tax=Escherichia coli RepID=A7ZLU9_ECO24
fimbrial-like adhesin protein
Fimbrial protein {ECO:0000313|EMBL:EFK45022.1}; TaxID=679206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 119-7.;"
L2_021_124G1_scaffold_142_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16153..16656)
DNA (504bp) protein (168aa)
Protein fimG homolog n=106 Tax=Enterobacteriaceae RepID=A7ZLV0_ECO24
fimbrial-like adhesin protein
Protein FimG {ECO:0000313|EMBL:ESD76380.1}; TaxID=1268996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908541.;"
L2_021_124G1_scaffold_142_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16669..17199)
DNA (531bp) protein (177aa)
Fimbrial protein n=182 Tax=Enterobacteriaceae RepID=A7ZLV1_ECO24
ydeS; putative fimbrial-like adhesin exported protein
Protein fimF {ECO:0000313|EMBL:EMU62391.1}; TaxID=1116132 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.7.;"
L2_021_124G1_scaffold_142_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17213..19864)
DNA (2652bp) protein (884aa)
Fimbrial usher protein n=23 Tax=Escherichia coli RepID=D8EA10_ECOLX
putative fimbrial usher protein
Putative fimbrial usher protein {ECO:0000313|EMBL:BAG77119.1}; TaxID=409438 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain SE11).;"
L2_021_124G1_scaffold_142_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19906..20616)
DNA (711bp) protein (237aa)
Periplasmic pilus chaperone family protein n=277 Tax=Enterobacteriaceae RepID=J7R4G3_ECOLX
fimbrial chaperone protein
Gram-negative pili assembly chaperone, N-terminal domain protein {ECO:0000313|EMBL:EII21580.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
L2_021_124G1_scaffold_142_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20977..21540)
DNA (564bp) protein (188aa)
Fimbrial protein n=641 Tax=Enterobacteriaceae RepID=J7QR22_ECOLX
putative major fimbrial subunit FmlA
Type-1 fimbrial protein, A chain {ECO:0000313|EMBL:EGU95788.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
L2_021_124G1_scaffold_142_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21997..22176)
DNA (180bp) protein (60aa)
Uncharacterized protein n=58 Tax=Escherichia coli RepID=J7QEC6_ECOLX
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:ESD76385.1}; TaxID=1268996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908541.;"
L2_021_124G1_scaffold_142_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22494..23816)
DNA (1323bp) protein (441aa)
Persistence to inhibition of murein or DNA biosynthesis, DNA-binding regulator n=129 Tax=Enterobacteriaceae RepID=J7Q7H5_ECOLX
hipA; regulator with hipB
Protein HipA {ECO:0000313|EMBL:ESD75436.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
L2_021_124G1_scaffold_142_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23816..24082)
DNA (267bp) protein (89aa)
Persistence to inhibition of murein or DNA biosynthesis regulatory protein n=395 Tax=Escherichia coli RepID=J7R4H0_ECOLX
antitoxin HipB
DNA-binding transcriptional regulator HipB {ECO:0000313|EMBL:BAI25379.1}; TaxID=573235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11 (strain 11368 / EHEC).;"
L2_021_124G1_scaffold_142_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24291..29711)
DNA (5421bp) protein (1807aa)
Outer membrane autotransporter barrel domain-containing protein n=5 Tax=Escherichia coli RepID=L4ZW57_ECOLX
Putative autotransporter protein {ECO:0000313|EMBL:BAI30459.1}; TaxID=585395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O103:H2 (strain 12009 / EHEC).;"
autotransporter protein
L2_021_124G1_scaffold_142_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(30242..31834)
DNA (1593bp) protein (531aa)
Autoinducer 2 kinase LsrK n=147 Tax=Escherichia coli RepID=LSRK_ECO24
lsrK; autoinducer-2 (AI-2) kinase
Carbohydrate kinase, FGGY family protein {ECO:0000313|EMBL:EID65171.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
L2_021_124G1_scaffold_142_21
Yersinia pestis, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(31913..32740)
DNA (828bp) protein (276aa)
Transcriptional regulator, sorC family n=40 Tax=Yersinia pestis RepID=D0JDZ7_YERPD
transcriptional repressor
Transcriptional regulator lsrR {ECO:0000313|EMBL:AJJ78042.1}; TaxID=360102 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia pestis bv. Antiqua (strain Antiqua).;"
L2_021_124G1_scaffold_142_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32989..34524
DNA (1536bp) protein (512aa)
Autoinducer 2 ABC transporter, ATP-binding protein LsrA n=6 Tax=Escherichia coli RepID=I2T8A4_ECOLX
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EID65173.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
putative ABC transporter ATP-binding protein
L2_021_124G1_scaffold_142_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34518..35546
DNA (1029bp) protein (343aa)
AI2 transporter membrane component of ABC superfamily n=144 Tax=Enterobacteriaceae RepID=B7L7L4_ECO55
autoinducer 2 ABC transporter permease LsrC
Autoinducer 2 ABC transporter, permease protein LsrC {ECO:0000313|EMBL:EIH24090.1}; TaxID=869675 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2264.;"
L2_021_124G1_scaffold_142_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35546..36538
DNA (993bp) protein (331aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Branched-chain amino acid transport system / permease component family protein n=8 Tax=Escherichia coli RepID=E7J1L2_ECOLX
Inner-membrane translocator {ECO:0000313|EMBL:EID65175.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
L2_021_124G1_scaffold_142_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36550..37572
DNA (1023bp) protein (341aa)
Autoinducer 2-binding protein LsrB n=61 Tax=Enterobacteriaceae RepID=LSRB_ECOLC
sugar ABC transporter periplasmic subunit
Autoinducer 2-binding protein lsrB {ECO:0000313|EMBL:EOW23796.1}; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE107.;"
L2_021_124G1_scaffold_142_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37599..38474
DNA (876bp) protein (292aa)
Uncharacterized protein n=122 Tax=Escherichia RepID=J7Q7I1_ECOLX
deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:ESD49582.1}; TaxID=1268989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907889.;"
L2_021_124G1_scaffold_142_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38498..38788
DNA (291bp) protein (97aa)
Uncharacterized protein n=253 Tax=Enterobacteriaceae RepID=B6IAS1_ECOSE
lsrG; autoinducer-2 (AI-2) modifying protein LsrG
Autoinducer 2-degrading protein lsrG {ECO:0000313|EMBL:KEJ47993.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
L2_021_124G1_scaffold_142_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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38845..39603
DNA (759bp) protein (253aa)
tam; trans-aconitate 2-methyltransferase (EC:2.1.1.144)
Trans-aconitate 2-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00560, ECO:0000256|SAAS:SAAS00012147}; EC=2.1.1.144 {ECO:0000256|HAMAP-Rule:MF_00560, ECO:0000256|SAAS:SAAS00012147};; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
Trans-aconitate 2-methyltransferase n=45 Tax=Escherichia coli RepID=E0IX73_ECOLW
L2_021_124G1_scaffold_142_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(39607..40521)
DNA (915bp) protein (305aa)
UPF0187 protein YneE n=264 Tax=Enterobacteriaceae RepID=YNEE_ECOLI
hypothetical protein
Inner membrane protein {ECO:0000313|EMBL:EQN99600.1}; TaxID=1280976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 25 (4-5851939).;"
L2_021_124G1_scaffold_142_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40728..42179)
DNA (1452bp) protein (484aa)
uxaB; altronate oxidoreductase (EC:1.1.1.58)
Altronate oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00670}; EC=1.1.1.58 {ECO:0000256|HAMAP-Rule:MF_00670};; Tagaturonate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00670}; Tagaturonate reductase {ECO:0000256|HAMAP-Rule:MF_00670}; TaxID=1444191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-182-04_S3_C3.;"
Altronate oxidoreductase n=259 Tax=Enterobacteriaceae RepID=UXAB_ECO24
Displaying items 1-30 of 62 in total

View Taxonomy