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L2_021_124G1_scaffold_156

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_124G1_scaffold_156_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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133..831
DNA (699bp) protein (233aa)
DNA-binding response regulator n=10 Tax=Clostridium perfringens RepID=H7CZ70_CLOPF
DNA-binding response regulator
Two-component response regulator {ECO:0000313|EMBL:BAB82070.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_124G1_scaffold_156_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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884..2635
DNA (1752bp) protein (584aa)
Putative sensor histidine kinase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V404_CLOPF
Putative sensor histidine kinase {ECO:0000313|EMBL:EDS78861.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
sensor histidine kinase
L2_021_124G1_scaffold_156_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2807..3163
DNA (357bp) protein (119aa)
ArsC family protein n=5 Tax=Clostridium perfringens RepID=H7CZ68_CLOPF
ArsC family protein
ArsC family protein {ECO:0000313|EMBL:EIA16134.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_021_124G1_scaffold_156_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3446..5677
DNA (2232bp) protein (744aa)
nrdA; ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Ribonucleoside-diphosphate reductase n=3 Tax=Clostridium perfringens RepID=H7CZ67_CLOPF
L2_021_124G1_scaffold_156_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5773..6807
DNA (1035bp) protein (345aa)
nrdF; ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Ribonucleoside-diphosphate reductase subunit beta n=9 Tax=Clostridium perfringens RepID=H7CZ66_CLOPF
L2_021_124G1_scaffold_156_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7213..7806
DNA (594bp) protein (198aa)
30S ribosomal protein S4 B n=3 Tax=Clostridium perfringens RepID=RS4B_CLOP1
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_021_124G1_scaffold_156_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7978..9984)
DNA (2007bp) protein (669aa)
Sigma-54 dependent transcriptional regulator/sensory box protein n=2 Tax=Clostridium perfringens RepID=B1RPJ7_CLOPF
Sigma-54 dependent transcriptional regulator/sensory box protein {ECO:0000313|EMBL:EDT71420.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
sigma-L-dependent transcriptional regulator
L2_021_124G1_scaffold_156_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10458..12077
DNA (1620bp) protein (540aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Phosphoenolpyruvate-protein phosphotransferase n=7 Tax=Clostridium perfringens RepID=H7CZ63_CLOPF
phosphoenolpyruvate-protein phosphotransferase
L2_021_124G1_scaffold_156_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12242..13411
DNA (1170bp) protein (390aa)
Isoaspartyl dipeptidase {ECO:0000256|PIRNR:PIRNR001238}; EC=3.4.19.- {ECO:0000256|PIRNR:PIRNR001238};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Isoaspartyl dipeptidase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BQL4_CLOPF
isoaspartyl dipeptidase
L2_021_124G1_scaffold_156_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13528..13842
DNA (315bp) protein (105aa)
Thioredoxin n=8 Tax=Clostridium perfringens RepID=Q0TMU6_CLOP1
trx; thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_124G1_scaffold_156_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13869..14729
DNA (861bp) protein (287aa)
Pyridine nucleotide-disulphide oxidoreductase n=7 Tax=Clostridium perfringens RepID=Q0SQJ3_CLOPS
trxR; thioredoxin reductase
Pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:EDT27455.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_021_124G1_scaffold_156_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14761..15363)
DNA (603bp) protein (201aa)
Spore cortex-lytic enzyme n=2 Tax=Clostridium perfringens RepID=H7CZ59_CLOPF
spore cortex-lytic protein
Probable spore cortex-lytic enzyme {ECO:0000313|EMBL:BAB82059.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_124G1_scaffold_156_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15434..16396)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SQJ5_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87093.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_021_124G1_scaffold_156_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16434..17414
DNA (981bp) protein (327aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CZ57_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT16038.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_021_124G1_scaffold_156_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17381..18706
DNA (1326bp) protein (442aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=B1RF72_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27386.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_021_124G1_scaffold_156_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18783..20384
DNA (1602bp) protein (534aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XHX7_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82055.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_124G1_scaffold_156_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20567..21475
DNA (909bp) protein (303aa)
ptb; phosphate butyryltransferase (EC:2.3.1.19)
Phosphate butyryltransferase {ECO:0000313|EMBL:EIA16120.1}; EC=2.3.1.19 {ECO:0000313|EMBL:EIA16120.1};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Phosphate butyryltransferase n=9 Tax=Clostridium perfringens RepID=H7CZ54_CLOPF
L2_021_124G1_scaffold_156_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21500..22570
DNA (1071bp) protein (357aa)
buk; butyrate kinase (EC:2.7.2.7)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:0000256|HAMAP-Rule:MF_00542}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Butyrate kinase n=9 Tax=Clostridium perfringens RepID=BUK_CLOP1
L2_021_124G1_scaffold_156_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22797..24515
DNA (1719bp) protein (573aa)
Iron hydrogenase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V421_CLOPF
Iron hydrogenase {ECO:0000313|EMBL:EDT71424.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hydA; iron hydrogenase
L2_021_124G1_scaffold_156_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24734..25843
DNA (1110bp) protein (370aa)
Probable maltose ABC transportor n=7 Tax=Clostridium perfringens RepID=Q8XHX9_CLOPE
maltose ABC transporter
Probable maltose ABC transportor {ECO:0000313|EMBL:BAB82051.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_124G1_scaffold_156_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25878..26819
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BMN9_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS78990.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L2_021_124G1_scaffold_156_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27275..28501
DNA (1227bp) protein (409aa)
Putative maltose/maltodextrin ABC transporter, maltose/maltodextrin-binding protein n=6 Tax=Clostridium perfringens RepID=H7CZ49_CLOPF
maltose/maltodextrin ABC transporter maltose/maltodextrin-binding protein
Putative maltose/maltodextrin ABC transporter, maltose/maltodextrin-binding protein {ECO:0000313|EMBL:EIA16115.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_021_124G1_scaffold_156_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28587..29540
DNA (954bp) protein (318aa)
Putative maltose/maltodextrin ABC transporter, permease protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V425_CLOPF
Putative maltose/maltodextrin ABC transporter, permease protein {ECO:0000313|EMBL:EDT71452.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
maltose/maltodextrin ABC transporter permease
L2_021_124G1_scaffold_156_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29542..30435
DNA (894bp) protein (298aa)
Putative maltose/maltodextrin ABC transporter, permease protein n=6 Tax=Clostridium perfringens RepID=H7CZ47_CLOPF
maltose/maltodextrin ABC transporter permease
Putative maltose/maltodextrin ABC transporter, permease protein {ECO:0000313|EMBL:EDS78921.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_021_124G1_scaffold_156_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30729..31742
DNA (1014bp) protein (338aa)
LacI family transcription regulator n=2 Tax=Clostridium perfringens RepID=H7CZ46_CLOPF
LacI family transcriptional regulator
LacI family transcription regulator {ECO:0000313|EMBL:EIA16112.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_021_124G1_scaffold_156_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31766..33913
DNA (2148bp) protein (716aa)
Glucosyl hydrolase family protein n=2 Tax=Clostridium perfringens RepID=H7CZ45_CLOPF
Glucosyl hydrolase family protein {ECO:0000313|EMBL:EIA16111.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
glycosyl hydrolase
L2_021_124G1_scaffold_156_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33935..35428
DNA (1494bp) protein (498aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
4-alpha-glucanotransferase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BQJ5_CLOPF
malQ; 4-alpha-glucanotransferase
L2_021_124G1_scaffold_156_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35421..37784
DNA (2364bp) protein (788aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
glgP; glycogen/starch/alpha-glucan phosphorylase (EC:2.4.1.1)
Phosphorylase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R7P7_CLOPF
L2_021_124G1_scaffold_156_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38128..38499
DNA (372bp) protein (124aa)
Putative glycogen debranching enzyme, type n=1 Tax=Clostridium perfringens F262 RepID=H7CZ42_CLOPF
Putative glycogen debranching enzyme, type {ECO:0000313|EMBL:EIA16108.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
glycogen debranching protein
Displaying 29 items

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