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L2_021_124G1_scaffold_231

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_124G1_scaffold_231_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..133)
DNA (132bp) protein (44aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C5ECT9_BIFLI
Transposase
Uncharacterized protein {ECO:0000313|EMBL:EEQ55833.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L2_021_124G1_scaffold_231_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

261..1268
DNA (1008bp) protein (336aa)
Predicted membrane protein (DUF2142) n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DCH0_BIFLN
Predicted membrane protein (DUF2142).
Predicted membrane protein (DUF2142) {ECO:0000313|EMBL:CBK70191.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L2_021_124G1_scaffold_231_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1299..2348)
DNA (1050bp) protein (350aa)
Glycosyltransferase involved in cell wall biogenesis n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZ72_BIFBU
Glycosyltransferase involved in cell wall biogenesis
Glycosyltransferase involved in cell wall biogenesis {ECO:0000313|EMBL:AHJ21985.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_021_124G1_scaffold_231_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3154..4332
DNA (1179bp) protein (393aa)
UDP-galactopyranose mutase n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DPG5_BIFLD
glf; UDP-galactopyranose mutase
UDP-galactopyranose mutase {ECO:0000313|EMBL:ACD99024.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_021_124G1_scaffold_231_5
unknown

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comp(4420..4908)
DNA (489bp) protein (163aa)

This feature has no annotations

L2_021_124G1_scaffold_231_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4943..6109
DNA (1167bp) protein (389aa)
Sugar-specific transcriptional regulator, TrmB family n=4 Tax=Bifidobacterium longum RepID=I3AW99_BIFLN
transcriptional regulator
Sugar-specific transcriptional regulator, TrmB family {ECO:0000313|EMBL:EIJ23392.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_021_124G1_scaffold_231_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6377..7588
DNA (1212bp) protein (404aa)
Uncharacterized protein n=3 Tax=Bifidobacterium longum RepID=C5EDG7_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ56061.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L2_021_124G1_scaffold_231_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7691..8512
DNA (822bp) protein (274aa)
Possible 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase in the fumarylacetoacetate hydrolase family n=11 Tax=Bifidobacterium RepID=Q8G4X7_BIFLO
mhpD; mhpd
FAH family protein {ECO:0000313|EMBL:EIJ23400.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_021_124G1_scaffold_231_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8585..8761)
DNA (177bp) protein (59aa)
Uncharacterized protein n=14 Tax=Bifidobacterium RepID=B3DPG8_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ29339.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_021_124G1_scaffold_231_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8758..9633)
DNA (876bp) protein (292aa)
Regulatory protein, IclR n=9 Tax=Bifidobacterium RepID=D6ZWN2_BIFLJ
transcriptional regulator
Transcriptional regulator, IclR family, C-terminal domain protein {ECO:0000313|EMBL:EIJ29314.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_021_124G1_scaffold_231_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9879..11432
DNA (1554bp) protein (518aa)
Histidine ammonia-lyase {ECO:0000256|RuleBase:RU004479, ECO:0000256|SAAS:SAAS00083026}; EC=4.3.1.3 {ECO:0000256|RuleBase:RU004479, ECO:0000256|SAAS:SAAS00083026};; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Histidine ammonia-lyase n=10 Tax=Bifidobacterium longum RepID=D6DCG5_BIFLN
histidine ammonia-lyase
L2_021_124G1_scaffold_231_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11651..14320
DNA (2670bp) protein (890aa)
Chaperone protein ClpB n=12 Tax=Bifidobacterium longum RepID=CLPB_BIFLO
Clp protease
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L2_021_124G1_scaffold_231_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14467..15576
DNA (1110bp) protein (370aa)
GltX2 n=9 Tax=Bacteria RepID=E4R2H8_BIFLM
gltX2; gltx2
Putative glutamyl-queuosine tRNA(Asp) synthetase {ECO:0000313|EMBL:EIJ23374.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_021_124G1_scaffold_231_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15602..16711
DNA (1110bp) protein (370aa)
Glycerophosphoryl diester phosphodiesterase n=9 Tax=Bifidobacterium longum RepID=D6ZWM8_BIFLJ
phosphodiesterase
Glycerophosphodiester phosphodiesterase family protein {ECO:0000313|EMBL:EIJ29300.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_021_124G1_scaffold_231_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16907..17386)
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Ribosomal RNA large subunit methyltransferase H n=19 Tax=Bifidobacterium RepID=RLMH_BIFLD
hypothetical protein
L2_021_124G1_scaffold_231_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17435..18076)
DNA (642bp) protein (214aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Uracil phosphoribosyltransferase n=7 Tax=Bifidobacterium RepID=UPP_BIFLD
upp; uracil phosphoribosyltransferase
L2_021_124G1_scaffold_231_17
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18380..19690
DNA (1311bp) protein (437aa)
Predicted ATPase (AAA+ superfamily) n=9 Tax=Bifidobacterium RepID=D6DCF9_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV37010.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_021_124G1_scaffold_231_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19950..20624)
DNA (675bp) protein (225aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=C2GWL1_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EEQ56048.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L2_021_124G1_scaffold_231_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20761..21960)
DNA (1200bp) protein (400aa)
Putative MutT1 protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I3K9_BIFLN
Putative MutT1 protein {ECO:0000313|EMBL:CCK35780.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
mutT3; NTP pyrophosphohydrolase for oxidative damage repair
L2_021_124G1_scaffold_231_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22118..24355)
DNA (2238bp) protein (746aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
Polyphosphate kinase n=6 Tax=Bifidobacterium longum RepID=D6ZWM2_BIFLJ
polyphosphate kinase
L2_021_124G1_scaffold_231_21
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24860..26233
DNA (1374bp) protein (458aa)
Calcineurin-like phosphoesterase n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XZH5_9BIFI
Calcineurin-like phosphoesterase {ECO:0000313|EMBL:EFV37006.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
ser/threonine protein phosphatase
Displaying 21 items

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