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L2_021_124G1_scaffold_245

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_124G1_scaffold_245_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1638
DNA (1638bp) protein (546aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CV11_CLOPF
Putative glycogen debranching enzyme, archaeal type {ECO:0000313|EMBL:EDT16027.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
glycogen debranching enzyme, type
L2_021_124G1_scaffold_245_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1749..2594
DNA (846bp) protein (282aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=Q8XHY9_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27480.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_021_124G1_scaffold_245_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2735..3034
DNA (300bp) protein (100aa)
TrpR-like protein YerC/YecD n=10 Tax=Clostridium perfringens RepID=H7CZ40_CLOPF
TrpR-like protein YerC/YecD
TrpR homolog YerC/YecD {ECO:0000313|EMBL:EDT27475.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_021_124G1_scaffold_245_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3100..3417
DNA (318bp) protein (106aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=Q0SQL3_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27450.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_021_124G1_scaffold_245_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3587..4279
DNA (693bp) protein (231aa)
Two-component response regulator n=6 Tax=Clostridium perfringens RepID=Q8XHZ2_CLOPE
two-component response regulator
Response regulator {ECO:0000313|EMBL:EDT15937.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_021_124G1_scaffold_245_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4242..5708
DNA (1467bp) protein (489aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Sensor histidine kinase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V436_CLOPF
two-component sensor histidine kinase
L2_021_124G1_scaffold_245_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5925..7217)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CZ36_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA16102.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L2_021_124G1_scaffold_245_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7690..9036
DNA (1347bp) protein (449aa)
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Phosphoglucosamine mutase n=8 Tax=Clostridium perfringens RepID=GLMM_CLOP1
L2_021_124G1_scaffold_245_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9190..9708)
DNA (519bp) protein (173aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CZ34_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA16100.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L2_021_124G1_scaffold_245_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10498..12330
DNA (1833bp) protein (611aa)
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=2 Tax=Clostridium perfringens RepID=H7CZ33_CLOPF
L2_021_124G1_scaffold_245_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12349..12519
DNA (171bp) protein (57aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CZ32_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27445.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_021_124G1_scaffold_245_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12733..13545
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XHZ9_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82031.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_124G1_scaffold_245_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13771..14349
DNA (579bp) protein (193aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
5-formyltetrahydrofolate cyclo-ligase family protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BMQ8_CLOPF
5-formyltetrahydrofolate cyclo-ligase
L2_021_124G1_scaffold_245_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14445..16139
DNA (1695bp) protein (565aa)
M3 family oligoendopeptidase (EC:3.4.24.-)
Oligoendopeptidase, M3 family {ECO:0000313|EMBL:EDT23711.1}; EC=3.4.24.- {ECO:0000313|EMBL:EDT23711.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Oligoendopeptidase, M3 family n=4 Tax=Clostridium perfringens RepID=Q0TMX7_CLOP1
L2_021_124G1_scaffold_245_15
unknown

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16323..16445
DNA (123bp) protein (41aa)

This feature has no annotations

L2_021_124G1_scaffold_245_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16604..18535)
DNA (1932bp) protein (644aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Threonine--tRNA ligase n=9 Tax=Clostridium perfringens RepID=SYT_CLOP1
L2_021_124G1_scaffold_245_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19661..21070
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XI03_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82027.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_124G1_scaffold_245_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21138..21542)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CUZ5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82026.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_124G1_scaffold_245_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21732..22424
DNA (693bp) protein (231aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CZ24_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15910.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_021_124G1_scaffold_245_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23097..23939
DNA (843bp) protein (281aa)
pyridoxamine kinase (EC:2.7.1.35)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Putative pyridoxal kinase n=3 Tax=Clostridium perfringens RepID=Q0TMY2_CLOP1
L2_021_124G1_scaffold_245_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24278..25591
DNA (1314bp) protein (438aa)
Probable Na+/H+ antiporter n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XI07_CLOPE
Na+/H+ antiporter
Probable Na+/H+ antiporter {ECO:0000313|EMBL:BAB82023.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Displaying 21 items

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