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L2_021_124G1_scaffold_253

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_124G1_scaffold_253_1
unknown

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comp(332..460)
DNA (129bp) protein (43aa)

This feature has no annotations

L2_021_124G1_scaffold_253_2
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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777..1313
DNA (537bp) protein (179aa)
RNA polymerase factor sigma-70 (EC:2.7.7.6)
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:AGX42538.1}; EC=2.7.7.6 {ECO:0000313|EMBL:AGX42538.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
RNA polymerase factor sigma-70 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MPV1_CLOSA
L2_021_124G1_scaffold_253_3
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1315..2718
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSX2_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX42537.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_021_124G1_scaffold_253_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2859..4733)
DNA (1875bp) protein (625aa)
sensory box protein/histidinol phosphate phosphatase (EC:3.1.3.15)
Sensory box protein/histidinol phosphate phosphatase family protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RN32_CLOPF
Sensory box protein/histidinol phosphate phosphatase family protein {ECO:0000313|EMBL:EDT71622.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L2_021_124G1_scaffold_253_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4917..5630)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BFP8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS81393.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L2_021_124G1_scaffold_253_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5757..6224)
DNA (468bp) protein (156aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=Q8XM89_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80507.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_124G1_scaffold_253_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6745..7272
DNA (528bp) protein (176aa)
Conserved domain protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BFQ0_CLOPF
Conserved domain protein {ECO:0000313|EMBL:EDS81368.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L2_021_124G1_scaffold_253_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7407..8663)
DNA (1257bp) protein (419aa)
FliB family protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RHY2_CLOPF
FliB family protein {ECO:0000313|EMBL:EDT26423.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
FliB family protein
L2_021_124G1_scaffold_253_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8845..9585)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R4P3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT24831.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L2_021_124G1_scaffold_253_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9809..10390
DNA (582bp) protein (194aa)
PAP2 family protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RHY4_CLOPF
PAP2 family protein {ECO:0000313|EMBL:EDT26397.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
PAP2 family protein
L2_021_124G1_scaffold_253_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10540..11055)
DNA (516bp) protein (172aa)
NUDIX family hydrolase n=4 Tax=Clostridium perfringens RepID=H7CTP5_CLOPF
NUDIX family hydrolase
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDT13418.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_021_124G1_scaffold_253_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11409..12179)
DNA (771bp) protein (257aa)
Ferrichrome transport ATP-binding protein FhuC n=3 Tax=Clostridium perfringens RepID=B1R4P6_CLOPF
iron(III) dicitrate ABC transporter
Probable iron(III) dicitrate ABC transporter {ECO:0000313|EMBL:BAB80501.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_124G1_scaffold_253_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12185..13207)
DNA (1023bp) protein (341aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNW3_CLOPF
iron compound ABC transporter permease
Iron compound ABC transporter, permease protein {ECO:0000313|EMBL:ABG87195.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_021_124G1_scaffold_253_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13207..14211)
DNA (1005bp) protein (335aa)
Iron compound ABC transporter, permease protein n=7 Tax=Clostridium perfringens RepID=Q0SUV3_CLOPS
iron compound ABC transporter permease
Iron compound ABC transporter, permease protein {ECO:0000313|EMBL:EDS81441.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_021_124G1_scaffold_253_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14341..15291
DNA (951bp) protein (317aa)
Lipoprotein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BFQ7_CLOPF
Lipoprotein {ECO:0000313|EMBL:EDS81403.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
lipoprotein
L2_021_124G1_scaffold_253_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15467..16063)
DNA (597bp) protein (199aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
FMN-dependent NADH-azoreductase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BNX8_CLOPF
flavodoxin family protein
L2_021_124G1_scaffold_253_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16097..16978)
DNA (882bp) protein (294aa)
Pirin family protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TSZ7_CLOP1
pirin
Pirin family protein {ECO:0000313|EMBL:EIA18045.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_021_124G1_scaffold_253_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17063..17506)
DNA (444bp) protein (148aa)
MarR family transcriptional regulator n=2 Tax=Clostridium perfringens RepID=H7CTP2_CLOPF
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:EIA18044.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_021_124G1_scaffold_253_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17609..18112)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CTP1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18043.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_021_124G1_scaffold_253_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18340..18765)
DNA (426bp) protein (142aa)
MarR family transcriptional regulator n=2 Tax=Clostridium perfringens RepID=H7CTP0_CLOPF
MarR family transcriptional regulator {ECO:0000313|EMBL:EIA18042.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
MarR family transcriptional regulator
L2_021_124G1_scaffold_253_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19028..19957)
DNA (930bp) protein (310aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
panE; 2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=2 Tax=Clostridium perfringens RepID=B1RHZ5_CLOPF
L2_021_124G1_scaffold_253_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19993..21051)
DNA (1059bp) protein (353aa)
Putative membrane protein n=6 Tax=Clostridium perfringens RepID=B1BKV2_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT16513.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
pfoS_R; regulatory protein
L2_021_124G1_scaffold_253_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21548..23218)
DNA (1671bp) protein (557aa)
Pyridine nucleotide-disulphide oxidoreductase family protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BKV3_CLOPF
Pyridine nucleotide-disulphide oxidoreductase family protein {ECO:0000313|EMBL:EDS79446.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
pyridine nucleotide-disulfide oxidoreductase
L2_021_124G1_scaffold_253_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23575..24138)
DNA (564bp) protein (188aa)
ahpC; alkyl hydroperoxide reductase (EC:1.11.1.15)
Peroxiredoxin {ECO:0000313|EMBL:EDS79537.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EDS79537.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Alkyl hydroperoxide reductase, C subunit n=4 Tax=Clostridium perfringens RepID=Q0TT05_CLOP1
L2_021_124G1_scaffold_253_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24354..25202
DNA (849bp) protein (283aa)
Metallo-beta-lactamase family protein n=3 Tax=Clostridium perfringens RepID=Q0TT06_CLOP1
metallo-beta-lactamase
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:EDT16550.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Displaying 25 items

View Taxonomy