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L2_021_124G1_scaffold_254

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_124G1_scaffold_254_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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195..521
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RSM6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15508.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_021_124G1_scaffold_254_2
unknown

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685..894
DNA (210bp) protein (70aa)

This feature has no annotations

L2_021_124G1_scaffold_254_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

991..2007
DNA (1017bp) protein (339aa)
C4-dicarboxylate transporter family protein n=3 Tax=Clostridium perfringens RepID=H7CRS3_CLOPF
C4-dicarboxylate transporter family protein {ECO:0000313|EMBL:EDT15480.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
C4-dicarboxylate transporter family protein
L2_021_124G1_scaffold_254_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2521..3540
DNA (1020bp) protein (340aa)
UPF0324 membrane protein n=3 Tax=Clostridium perfringens RepID=H1CW77_CLOPF
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT15453.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_021_124G1_scaffold_254_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3741..3893
DNA (153bp) protein (51aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=Q8XP35_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27336.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_021_124G1_scaffold_254_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4114..5007)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XP34_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79837.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_124G1_scaffold_254_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5341..6579
DNA (1239bp) protein (413aa)
Putative competence-damage inducible protein n=5 Tax=Clostridium perfringens RepID=CINA_CLOPE
cinA; competence damage-inducible protein A
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L2_021_124G1_scaffold_254_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7216..8142
DNA (927bp) protein (309aa)
CAAX amino terminal protease family protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BEK3_CLOPF
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EDS81757.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
CAAX amino terminal protease
L2_021_124G1_scaffold_254_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8334..8603)
DNA (270bp) protein (90aa)
HesB-like domain protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SWN2_CLOPS
HesB family selenoprotein
HesB-like domain protein {ECO:0000313|EMBL:ABG85499.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_021_124G1_scaffold_254_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8974..9561
DNA (588bp) protein (196aa)
Rubrerythrin n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=RUBY_CLOPE
rubY; rubrerythrin
Rubrerythrin; Short=Rr;; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_124G1_scaffold_254_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9715..10260)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V1C6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15479.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_021_124G1_scaffold_254_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10661..10786
DNA (126bp) protein (42aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CRT3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15451.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_021_124G1_scaffold_254_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11051..12607
DNA (1557bp) protein (519aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BS61_CLOPF
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT15486.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
ABC transporter
L2_021_124G1_scaffold_254_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12794..13000)
DNA (207bp) protein (69aa)
Transcription regulator, Cro/CI family-related protein n=3 Tax=Clostridium perfringens RepID=B1BS60_CLOPF
Transcription regulator, Cro/CI family-related protein {ECO:0000313|EMBL:EDT72411.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L2_021_124G1_scaffold_254_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13021..13509)
DNA (489bp) protein (163aa)
Putative membrane protein n=2 Tax=Clostridium perfringens RepID=B1BS59_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT72434.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L2_021_124G1_scaffold_254_16
Bacillus sp. B14905, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13562..13780)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Bacillus sp. B14905 RepID=A3I9L8_9BACI
group-specific protein
Uncharacterized protein {ECO:0000313|EMBL:EAZ85607.1}; TaxID=388400 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. B14905.;"
L2_021_124G1_scaffold_254_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14154..14612)
DNA (459bp) protein (153aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=B1BS57_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT15472.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L2_021_124G1_scaffold_254_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14783..15199
DNA (417bp) protein (139aa)
Putative transcriptional regulator, MarR family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BS56_CLOPF
Putative transcriptional regulator, MarR family {ECO:0000313|EMBL:EDT15448.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
MarR family transcriptional regulator
L2_021_124G1_scaffold_254_19
unknown

Not on your lists

15291..15386
DNA (96bp) protein (32aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CW61_CLOPF
L2_021_124G1_scaffold_254_20
unknown

Not on your lists

15534..16289
DNA (756bp) protein (252aa)

This feature has no annotations

L2_021_124G1_scaffold_254_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16323..16484)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQV5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS79685.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L2_021_124G1_scaffold_254_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16594..17148
DNA (555bp) protein (185aa)
BRO family, N-terminal domain protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SWM4_CLOPS
BRO domain-containing protein
BRO family, N-terminal domain protein {ECO:0000313|EMBL:ABG87126.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_021_124G1_scaffold_254_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17676..18227
DNA (552bp) protein (184aa)
Probable RNA 2'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00299}; EC=2.7.1.- {ECO:0000256|HAMAP-Rule:MF_00299};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Probable RNA 2'-phosphotransferase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CW59_CLOPF
RNA 2'-phosphotransferase-like protein
L2_021_124G1_scaffold_254_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18655..20829
DNA (2175bp) protein (725aa)
Cell wall surface anchor family protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SWL9_CLOPS
peptidoglycan bound protein
Cell wall surface anchor family protein {ECO:0000313|EMBL:ABG86767.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_021_124G1_scaffold_254_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20833..22401
DNA (1569bp) protein (523aa)
Putative surface protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BS42_CLOPF
Putative surface protein {ECO:0000313|EMBL:EDT15434.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
surface protein
L2_021_124G1_scaffold_254_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22838..23620
DNA (783bp) protein (261aa)
Sortase family protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RFD4_CLOPF
Sortase family protein {ECO:0000313|EMBL:EDT27335.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
sortase family protein
L2_021_124G1_scaffold_254_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23689..24600
DNA (912bp) protein (304aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CRV6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS79678.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Displaying 27 items

View Taxonomy