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L2_021_124G1_scaffold_256

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_124G1_scaffold_256_1
unknown

Not on your lists

3..77
DNA (75bp) protein (25aa)
putative helicase
L2_021_124G1_scaffold_256_2
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

186..533
DNA (348bp) protein (116aa)
RNA polymerase-binding protein RbpA n=3 Tax=Bifidobacterium RepID=A1A1L7_BIFAA
hypothetical protein
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L2_021_124G1_scaffold_256_3
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

639..1352
DNA (714bp) protein (238aa)
Hydrolase or phosphatase {ECO:0000313|EMBL:KFI98437.1}; EC=3.1.3.5 {ECO:0000313|EMBL:KFI98437.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Haloacid dehalogenase-like hydrolase n=3 Tax=Bifidobacterium RepID=A7A5Q0_BIFAD
hydrolase or phosphatase
L2_021_124G1_scaffold_256_4
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1534..1899)
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A5P9_BIFAD
anaerobic C4-dicarboxylate transport protein
Anaerobic C4-dicarboxylate transport protein {ECO:0000313|EMBL:AJE05922.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_021_124G1_scaffold_256_5
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1965..2585)
DNA (621bp) protein (207aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A5P8_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE05923.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_021_124G1_scaffold_256_6
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2695..3141)
DNA (447bp) protein (149aa)
Possible signal transduction protein n=3 Tax=Bifidobacterium RepID=A1A1M1_BIFAA
putative signal transduction protein
Possible signal transduction protein {ECO:0000313|EMBL:CCY20701.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L2_021_124G1_scaffold_256_7
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3214..3438)
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A5P6_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII76294.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_021_124G1_scaffold_256_8
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3506..3637)
DNA (132bp) protein (44aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A5P5_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE05926.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_021_124G1_scaffold_256_9
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4477..5286
DNA (810bp) protein (270aa)
Uncharacterized protein n=3 Tax=root RepID=A7A5P1_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIM01472.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_021_124G1_scaffold_256_10
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5378..6262)
DNA (885bp) protein (295aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Undecaprenyl-diphosphatase n=3 Tax=Bifidobacterium RepID=UPPP_BIFAA
undecaprenyl-diphosphatase
L2_021_124G1_scaffold_256_11
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6401..7222
DNA (822bp) protein (274aa)
Fructosamine kinase {ECO:0000313|EMBL:KFI98429.1}; EC=2.7.1.172 {ECO:0000313|EMBL:KFI98429.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Fructosamine kinase n=2 Tax=Bifidobacterium RepID=A7A5N9_BIFAD
hypothetical protein
L2_021_124G1_scaffold_256_12
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7330..8556)
DNA (1227bp) protein (409aa)
Chaperone protein DnaJ n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5N8_BIFAD
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
dnaJ; chaperone protein DnaJ
L2_021_124G1_scaffold_256_13
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8534..9661)
DNA (1128bp) protein (376aa)
Heat-inducible transcription repressor hrcA n=2 Tax=Bifidobacterium RepID=A7A5N7_BIFAD
heat-inducible transcription repressor hrcA
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L2_021_124G1_scaffold_256_14
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10036..12144
DNA (2109bp) protein (703aa)
Transketolase {ECO:0000313|EMBL:KFI98426.1}; EC=2.2.1.1 {ECO:0000313|EMBL:KFI98426.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Transketolase n=2 Tax=Bifidobacterium adolescentis RepID=A1A1M7_BIFAA
transketolase
L2_021_124G1_scaffold_256_15
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12234..13337
DNA (1104bp) protein (368aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
Transaldolase n=5 Tax=Bifidobacterium RepID=A1A1M8_BIFAA
transaldolase
L2_021_124G1_scaffold_256_16
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13508..15040)
DNA (1533bp) protein (511aa)
Aminotransferase, class I/II n=3 Tax=Bifidobacterium RepID=A7A5N3_BIFAD
Bifunctional HTH-domain containing protein/aminotransferase {ECO:0000313|EMBL:AII76303.1}; Putative aminotransferase {ECO:0000313|EMBL:AJE05934.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
putative aminotransferase
L2_021_124G1_scaffold_256_17
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15192..16040)
DNA (849bp) protein (283aa)
HAD hydrolase, family IIB n=2 Tax=Bifidobacterium RepID=A7A5N2_BIFAD
hypothetical protein
HAD family hydrolase {ECO:0000313|EMBL:KIM01464.1}; Haloacid dehalogenase {ECO:0000313|EMBL:AII76304.1}; Uncharacterized protein {ECO:0000313|EMBL:AJE05935.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_021_124G1_scaffold_256_18
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16128..16376)
DNA (249bp) protein (83aa)
Protein-export membrane protein SecG n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GZK1_9BIFI
secG; preprotein translocase subunit SecG
Preprotein translocase subunit SecG {ECO:0000313|EMBL:KFI98422.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L2_021_124G1_scaffold_256_19
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16475..17383)
DNA (909bp) protein (303aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Triosephosphate isomerase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=TPIS_BIFAA
tpiA; triosephosphate isomerase
L2_021_124G1_scaffold_256_20
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17394..18599)
DNA (1206bp) protein (402aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
Phosphoglycerate kinase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GLQ7_9BIFI
phosphoglycerate kinase
L2_021_124G1_scaffold_256_21
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18731..19681)
DNA (951bp) protein (317aa)
Putative sporulation transcription regulator WhiA n=3 Tax=Bifidobacterium RepID=WHIA_BIFAA
hypothetical protein
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_021_124G1_scaffold_256_22
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19836..20768)
DNA (933bp) protein (311aa)
UPF0042 nucleotide-binding protein BAD_0837 n=3 Tax=Bifidobacterium RepID=Y837_BIFAA
ATP-binding protein
Nucleotide-binding protein BIFADO_01146 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L2_021_124G1_scaffold_256_23
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20768..21706)
DNA (939bp) protein (313aa)
Shikimate dehydrogenase substrate binding domain protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GL72_9BIFI
shikimate 5-dehydrogenase
Putative shikimate 5-dehydrogenase {ECO:0000313|EMBL:AJE05941.1}; Shikimate 5-dehydrogenase {ECO:0000313|EMBL:AII76310.1}; Shikimate dehydrogenase {ECO:0000313|EMBL:KIM01459.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_021_124G1_scaffold_256_24
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21772..24084)
DNA (2313bp) protein (771aa)
UvrABC system protein C n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5M4_BIFAD
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
excinuclease ABC subunit C
L2_021_124G1_scaffold_256_25
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24111..24977)
DNA (867bp) protein (289aa)
UvrABC system protein A n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5M3_BIFAD
uvrA; excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
Displaying 25 items

View Taxonomy