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L2_021_124G1_scaffold_317

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_124G1_scaffold_317_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..292)
DNA (291bp) protein (97aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=3 Tax=Clostridium perfringens RepID=H7CYY1_CLOPF
prepilin-type N-terminal cleavage/methylation domain-containing protein
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:EIA16047.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_021_124G1_scaffold_317_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(318..2426)
DNA (2109bp) protein (703aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XI42_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81985.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_124G1_scaffold_317_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2428..3432)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CYY3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA16049.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L2_021_124G1_scaffold_317_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3453..4670)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CYY4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA16050.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L2_021_124G1_scaffold_317_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4660..5226)
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CUV7_CLOPF
hypothetical protein
Type IV pilus biogenesis protein PilN {ECO:0000313|EMBL:ABG87107.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_021_124G1_scaffold_317_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5241..6356)
DNA (1116bp) protein (372aa)
Type IV pilus assembly protein PilM n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CUV8_CLOPF
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:EDT16032.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
type IV pilus assembly protein PilM
L2_021_124G1_scaffold_317_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6462..6953)
DNA (492bp) protein (164aa)
Putative type IV pilin n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BMW7_CLOPF
Putative type IV pilin {ECO:0000313|EMBL:EDS78978.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
type IV pilin
L2_021_124G1_scaffold_317_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6985..7413)
DNA (429bp) protein (143aa)
Prepilin peptidase-dependent n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RF06_CLOPF
Prepilin peptidase-dependent {ECO:0000313|EMBL:EDT27426.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_021_124G1_scaffold_317_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7485..8690)
DNA (1206bp) protein (402aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CUW0_CLOPF
type II secretion system protein F
Probable pilin biogenesis protein {ECO:0000313|EMBL:BAB81991.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_124G1_scaffold_317_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8717..10408)
DNA (1692bp) protein (564aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CUW1_CLOPF
Probable pilin biogenesis protein {ECO:0000313|EMBL:BAB81992.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
secretion system protein E
L2_021_124G1_scaffold_317_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10469..11221)
DNA (753bp) protein (251aa)
Type IV leader peptidase family protein n=4 Tax=Clostridium perfringens RepID=Q0TN29_CLOP1
Type IV leader peptidase
Type IV leader peptidase family protein {ECO:0000313|EMBL:EDT22559.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_021_124G1_scaffold_317_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11499..11918)
DNA (420bp) protein (140aa)
Prepilin peptidase dependent protein A n=1 Tax=Clostridium perfringens F262 RepID=H7CYZ3_CLOPF
Prepilin peptidase dependent protein A {ECO:0000313|EMBL:EIA16059.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
type IV pilin
L2_021_124G1_scaffold_317_13
unknown

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comp(12132..12323)
DNA (192bp) protein (64aa)

This feature has no annotations

L2_021_124G1_scaffold_317_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12567..14186)
DNA (1620bp) protein (540aa)
60 kDa chaperonin n=8 Tax=Clostridium perfringens RepID=CH60_CLOP1
groEL; molecular chaperone GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_021_124G1_scaffold_317_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14241..14525)
DNA (285bp) protein (95aa)
10 kDa chaperonin n=10 Tax=Clostridium perfringens RepID=CH10_CLOP1
groES; co-chaperonin GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_021_124G1_scaffold_317_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14897..15547
DNA (651bp) protein (217aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XI33_CLOPE
hypothetical protein
Integral membrane protein TIGR01906 {ECO:0000313|EMBL:EDT16004.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_021_124G1_scaffold_317_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15696..16001
DNA (306bp) protein (102aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=Q8XI32_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81998.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_124G1_scaffold_317_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16123..17061)
DNA (939bp) protein (313aa)
Putative 8-oxoguanine DNA glycosylase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SQQ3_CLOPS
8-oxoguanine DNA glycosylase
Putative 8-oxoguanine DNA glycosylase {ECO:0000313|EMBL:ABG85629.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_021_124G1_scaffold_317_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17071..17475)
DNA (405bp) protein (135aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CYZ9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15980.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_021_124G1_scaffold_317_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17727..18227)
DNA (501bp) protein (167aa)
Signal peptidase I {ECO:0000313|EMBL:EDT27467.1}; EC=3.4.21.89 {ECO:0000313|EMBL:EDT27467.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RF17_CLOPF
L2_021_124G1_scaffold_317_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18369..20069)
DNA (1701bp) protein (567aa)
ABC transporter, ATP-binding protein/permease protein n=3 Tax=Clostridium perfringens RepID=Q0TN20_CLOP1
Probable ABC transporter {ECO:0000313|EMBL:BAB82002.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
ABC transporter
Displaying 21 items

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