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L2_021_124G1_scaffold_341

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_124G1_scaffold_341_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(430..2967)
DNA (2538bp) protein (846aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Putative beta-N-acetylhexosaminidase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUK3_CLOPF
beta-N-acetylhexosaminidase
L2_021_124G1_scaffold_341_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3422..4099
DNA (678bp) protein (226aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Uracil-DNA glycosylase n=6 Tax=Clostridium perfringens RepID=H7CS60_CLOPF
uracil-DNA glycosylase
L2_021_124G1_scaffold_341_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4241..4537
DNA (297bp) protein (99aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CS59_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18548.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_021_124G1_scaffold_341_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4754..6067
DNA (1314bp) protein (438aa)
Putative membrane protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RRN4_CLOPF
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT23566.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_021_124G1_scaffold_341_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6191..6403)
DNA (213bp) protein (71aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CS57_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA18546.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L2_021_124G1_scaffold_341_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6767..7390)
DNA (624bp) protein (208aa)
CutC family protein n=2 Tax=Clostridium perfringens RepID=H7CS56_CLOPF
CutC family protein {ECO:0000313|EMBL:EIA18545.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
CutC family protein
L2_021_124G1_scaffold_341_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7387..8523)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XNS2_CLOPE
mechanosensitive ion channel protein MscS
Uncharacterized protein {ECO:0000313|EMBL:BAB79966.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_124G1_scaffold_341_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8706..9188)
DNA (483bp) protein (161aa)
CarD family transcriptional regulator n=8 Tax=Clostridium perfringens RepID=H7CS54_CLOPF
CarD family transcriptional regulator
CarD family transcriptional regulator {ECO:0000313|EMBL:EIA18543.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_021_124G1_scaffold_341_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9432..10046)
DNA (615bp) protein (205aa)
lacA; galactoside O-acetyltransferase (EC:2.3.1.18)
Galactoside O-acetyltransferase {ECO:0000313|EMBL:EDS80877.1}; EC=2.3.1.18 {ECO:0000313|EMBL:EDS80877.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Galactoside O-acetyltransferase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TUH7_CLOP1
L2_021_124G1_scaffold_341_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10174..10383)
DNA (210bp) protein (70aa)
Conserved domain protein n=3 Tax=Clostridium perfringens RepID=B1BHA3_CLOPF
transcriptional regulator
Conserved domain protein {ECO:0000313|EMBL:EDT14676.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_021_124G1_scaffold_341_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10417..10758)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BHA2_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS80856.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_021_124G1_scaffold_341_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10910..11641
DNA (732bp) protein (244aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
NAD-dependent protein deacetylase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V2J6_CLOPF
NAD-dependent deacetylase
L2_021_124G1_scaffold_341_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11739..11987)
DNA (249bp) protein (83aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CS51_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG86734.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_021_124G1_scaffold_341_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12000..12203)
DNA (204bp) protein (68aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=Q8XNS9_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79959.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_124G1_scaffold_341_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12323..12769
DNA (447bp) protein (149aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=Q8XNT0_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14680.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_021_124G1_scaffold_341_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12842..14164)
DNA (1323bp) protein (441aa)
Putative lipoprotein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUI9_CLOPF
Putative lipoprotein {ECO:0000313|EMBL:EDT14673.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
lipoprotein
L2_021_124G1_scaffold_341_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14480..15253)
DNA (774bp) protein (258aa)
Capsular polysaccharide biosynthesis protein n=2 Tax=Clostridium perfringens RepID=B1R873_CLOPF
capsular polysaccharide biosynthesis protein
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDT23561.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_021_124G1_scaffold_341_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15526..16260)
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CWH1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79955.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_021_124G1_scaffold_341_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16278..18005)
DNA (1728bp) protein (576aa)
DnaK protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XNT4_CLOPE
DnaK protein {ECO:0000313|EMBL:BAB79954.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
dnaK; molecular chaperone DnaK
L2_021_124G1_scaffold_341_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17993..18592)
DNA (600bp) protein (200aa)
Putative co-chaperone GrpE n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V2I8_CLOPF
Putative co-chaperone GrpE {ECO:0000313|EMBL:EDT71961.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
co-chaperone GrpE
Displaying 20 items

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