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L2_021_251G1_scaffold_35

Search features with annotation key words

Displaying items 1-30 of 105 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_251G1_scaffold_35_1
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..1320)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K069_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69670.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Flagellin and related hook-associated proteins
L2_021_251G1_scaffold_35_2
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1452..1691)
DNA (240bp) protein (80aa)
Global regulator protein family n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HER3_9FIRM
Global regulator protein family {ECO:0000313|EMBL:CDE37448.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L2_021_251G1_scaffold_35_3
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1940..2563
DNA (624bp) protein (208aa)
Site-specific recombinase XerD n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HGV0_9FIRM
Site-specific recombinase XerD {ECO:0000313|EMBL:CDE37447.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Site-specific recombinase XerD
L2_021_251G1_scaffold_35_4
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2854..3654
DNA (801bp) protein (267aa)
Oxidoreductase short chain dehydrogenase/reductase family protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDN7_9FIRM
Oxidoreductase short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:CDE37446.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
L2_021_251G1_scaffold_35_5
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3715..4305)
DNA (591bp) protein (197aa)
Putative membrane protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L1V9_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDE81187.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
L2_021_251G1_scaffold_35_6
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4310..5260)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE37445.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_021_251G1_scaffold_35_7
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5260..6834)
DNA (1575bp) protein (525aa)
Na+:H+ antiporter NhaC family n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCS0_9FIRM
Na+:H+ antiporter NhaC family {ECO:0000313|EMBL:CDE37444.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Na+:H+ antiporter, NhaC family
L2_021_251G1_scaffold_35_8
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6895..8232)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HEQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE37443.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_021_251G1_scaffold_35_9
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8236..8433)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HGU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE37442.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L2_021_251G1_scaffold_35_10
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8593..9780)
DNA (1188bp) protein (396aa)
Sodium/glutamate symporter n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDN3_9FIRM
Sodium/glutamate symporter {ECO:0000313|EMBL:CDE37441.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
sodium--glutamate symport carrier (gltS)
L2_021_251G1_scaffold_35_11
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9798..10781)
DNA (984bp) protein (328aa)
TRAP transporter solute receptor TAXI family n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDG1_9FIRM
TRAP transporter solute receptor TAXI family {ECO:0000313|EMBL:CDE37440.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
TRAP transporter solute receptor, TAXI family
L2_021_251G1_scaffold_35_12
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10856..11179)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE37439.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L2_021_251G1_scaffold_35_13
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11142..11285)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HEQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE37438.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L2_021_251G1_scaffold_35_14
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11740..12738)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE37436.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_021_251G1_scaffold_35_15
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12903..13265)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE37435.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L2_021_251G1_scaffold_35_16
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13483..14142)
DNA (660bp) protein (220aa)
Predicted transcriptional regulators n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCR2_9FIRM
Predicted transcriptional regulators {ECO:0000313|EMBL:CDE37434.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Predicted transcriptional regulators
L2_021_251G1_scaffold_35_17
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14375..15010)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HEP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE37433.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_021_251G1_scaffold_35_18
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15094..15597)
DNA (504bp) protein (168aa)
Adenylate kinase and related kinases n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HGT6_9FIRM
Adenylate kinase and related kinases {ECO:0000313|EMBL:CDE37432.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Adenylate kinase and related kinases
L2_021_251G1_scaffold_35_19
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15664..15999)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NQL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ04434.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
hypothetical protein
L2_021_251G1_scaffold_35_20
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16371..16595)
DNA (225bp) protein (75aa)
Fic family protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NIQ2_CLOSV
Fic family protein {ECO:0000313|EMBL:EDS05492.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L2_021_251G1_scaffold_35_21
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17119..17400)
DNA (282bp) protein (94aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A8S3P4_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGN30197.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L2_021_251G1_scaffold_35_22
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17375..17899)
DNA (525bp) protein (175aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=C4Z770_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR73148.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L2_021_251G1_scaffold_35_23
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18116..19528)
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9E9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36279.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_021_251G1_scaffold_35_24
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19537..20475)
DNA (939bp) protein (313aa)
CMP-binding protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBG9_9FIRM
CMP-binding protein {ECO:0000313|EMBL:CDE36278.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
CMP-binding protein
L2_021_251G1_scaffold_35_25
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20528..21784)
DNA (1257bp) protein (419aa)
2-alkenal reductase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDM7_9FIRM
2-alkenal reductase {ECO:0000313|EMBL:CDE36277.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
2-alkenal reductase
L2_021_251G1_scaffold_35_26
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21983..24352
DNA (2370bp) protein (790aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Endonuclease MutS2 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAF5_9FIRM
DNA mismatch repair protein MutS2
L2_021_251G1_scaffold_35_27
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24368..25072
DNA (705bp) protein (235aa)
Two-component system OmpR family response regulator ResD n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HA96_9FIRM
Two-component system OmpR family response regulator ResD {ECO:0000313|EMBL:CDE36275.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
two-component system OmpR family response regulator ResD
L2_021_251G1_scaffold_35_28
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25126..26544
DNA (1419bp) protein (473aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Two-component system OmpR family phosphate regulon sensor histidine kinase PhoR n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9E5_9FIRM
two-component system OmpR family phosphate regulon sensor histidine kinase PhoR
L2_021_251G1_scaffold_35_29
unknown

Not on your lists

comp(26606..26773)
DNA (168bp) protein (56aa)

This feature has no annotations

L2_021_251G1_scaffold_35_30
Slackia heliotrinireducens, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26824..28194)
DNA (1371bp) protein (457aa)
Glucan-binding domain-containing protein n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N6D1_SLAHD
Glucan-binding domain-containing protein {ECO:0000313|EMBL:ACV22466.1}; TaxID=471855 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029; / RHS 1) (Peptococcus heliotrinreducens).;"
glucan-binding domain-containing protein
Displaying items 1-30 of 105 in total

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