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L2_021_251G1_scaffold_71

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_251G1_scaffold_71_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..110)
DNA (108bp) protein (36aa)
Haloacid dehalogenase-like hydrolase family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I0W7_BIFLN
hydrolase
Haloacid dehalogenase {ECO:0000313|EMBL:AIW43780.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_251G1_scaffold_71_2
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(242..589)
DNA (348bp) protein (116aa)
RNA polymerase-binding protein RbpA n=17 Tax=Bifidobacterium RepID=B3DRZ5_BIFLD
hypothetical protein
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_021_251G1_scaffold_71_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(705..3296)
DNA (2592bp) protein (864aa)
Putative DEAD-like helicase n=1 Tax=Bifidobacterium longum E18 RepID=V6XWI6_BIFLN
Putative DEAD-like helicase {ECO:0000313|EMBL:ESV33582.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
helicase
L2_021_251G1_scaffold_71_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3309..3626)
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=V6XWP6_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI97500.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_021_251G1_scaffold_71_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3637..5550)
DNA (1914bp) protein (638aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G6A6_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHD95372.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L2_021_251G1_scaffold_71_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5690..7219)
DNA (1530bp) protein (510aa)
Udp-glucose pyrophosphorylase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8AQA4_BIFLN
udp-glucose pyrophosphorylase
Udp-glucose pyrophosphorylase {ECO:0000313|EMBL:AEI97498.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_021_251G1_scaffold_71_7
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7599..9728)
DNA (2130bp) protein (710aa)
Bifunctional cytidylate kinase/GTP-binding protein n=5 Tax=Bifidobacterium RepID=F8AQA3_BIFLN
GTPase Der {ECO:0000256|SAAS:SAAS00038180}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
bifunctional cytidylate kinase/GTP-binding protein
L2_021_251G1_scaffold_71_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9725..10495)
DNA (771bp) protein (257aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Pseudouridine synthase n=19 Tax=Bifidobacterium RepID=B3DRY9_BIFLD
pseudouridine synthase
L2_021_251G1_scaffold_71_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10691..11659
DNA (969bp) protein (323aa)
Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) n=6 Tax=Bifidobacterium RepID=D6DDC6_BIFLN
Probable membrane channel protein {ECO:0000313|EMBL:BAP83591.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
major intrinsic protein
L2_021_251G1_scaffold_71_10
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11558..11860)
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R5MW24_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFV36742.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
hypothetical protein
L2_021_251G1_scaffold_71_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12006..13643)
DNA (1638bp) protein (546aa)
Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase n=1 Tax=Bifidobacterium longum E18 RepID=V6Y181_BIFLN
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
purH; purh
L2_021_251G1_scaffold_71_12
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13591..14970)
DNA (1380bp) protein (460aa)
Bifunctional purine biosynthesis protein purH n=2 Tax=Bifidobacterium RepID=E5Y062_9BIFI
Bifunctional purine biosynthesis protein purH {ECO:0000313|EMBL:EFV36740.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
hypothetical protein
L2_021_251G1_scaffold_71_13
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14990..15901)
DNA (912bp) protein (304aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Succinyl-CoA ligase [ADP-forming] subunit alpha n=17 Tax=Bifidobacterium RepID=B3DRY4_BIFLD
succinyl-CoA synthase subunit alpha
L2_021_251G1_scaffold_71_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15901..17103)
DNA (1203bp) protein (401aa)
Succinyl-CoA synthetase beta subunit n=18 Tax=Bifidobacterium RepID=B3DRY3_BIFLD
succinyl-CoA synthase beta subunit
Succinyl-CoA synthetase beta chain {ECO:0000313|EMBL:AAN24549.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_021_251G1_scaffold_71_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17200..17781)
DNA (582bp) protein (194aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Adenine phosphoribosyltransferase n=17 Tax=Bifidobacterium RepID=APT_BIFLD
adenine phosphoribosyltransferase
L2_021_251G1_scaffold_71_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17845..18282)
DNA (438bp) protein (146aa)
Preprotein translocase subunit n=14 Tax=Bifidobacterium RepID=B3DRY1_BIFLD
hypothetical protein
Preprotein translocase subunit {ECO:0000313|EMBL:ACD97900.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_021_251G1_scaffold_71_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18347..19411)
DNA (1065bp) protein (355aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Holliday junction ATP-dependent DNA helicase RuvB n=3 Tax=Bifidobacterium longum subsp. longum RepID=D6ZUF1_BIFLJ
ruvB; Holliday junction DNA helicase RuvB
L2_021_251G1_scaffold_71_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19411..20037)
DNA (627bp) protein (209aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Holliday junction ATP-dependent DNA helicase RuvA n=9 Tax=Bifidobacterium RepID=RUVA_BIFLD
Holliday junction DNA helicase RuvA
L2_021_251G1_scaffold_71_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20095..20679)
DNA (585bp) protein (195aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
Crossover junction endodeoxyribonuclease RuvC n=9 Tax=Bifidobacterium RepID=RUVC_BIFLD
ruvC; Holliday junction resolvase
L2_021_251G1_scaffold_71_20
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20685..21440)
DNA (756bp) protein (252aa)
Probable transcriptional regulatory protein HMPREF0177_01626 n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5Y054_9BIFI
Probable transcriptional regulatory protein HMPREF0177_01626 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
hypothetical protein
L2_021_251G1_scaffold_71_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21579..22163)
DNA (585bp) protein (195aa)
Uncharacterized protein n=11 Tax=Bifidobacterium RepID=Q8G6C1_BIFLO
HIT family hydrolase
HIT family hydrolase {ECO:0000313|EMBL:AIW43797.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_251G1_scaffold_71_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22303..23265)
DNA (963bp) protein (321aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
Putative threonine--tRNA ligase n=1 Tax=Bifidobacterium longum subsp. longum 35B RepID=I3B2G6_BIFLN
thrS; threonyl-tRNA synthetase
L2_021_251G1_scaffold_71_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23262..24221)
DNA (960bp) protein (320aa)
Threonine/alanine tRNA ligase second additional domain protein n=1 Tax=Bifidobacterium longum subsp. longum 35B RepID=I3B2J9_BIFLN
threonyl-tRNA synthase
Threonine/alanine tRNA ligase second additional domain protein {ECO:0000313|EMBL:EIJ25592.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_021_251G1_scaffold_71_24
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25041..25874
DNA (834bp) protein (278aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=Q8G6C3_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95624.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_021_251G1_scaffold_71_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26031..26915)
DNA (885bp) protein (295aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006, ECO:0000313|EMBL:CBK70485.1}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006, ECO:0000313|EMBL:CBK70485.1};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Undecaprenyl-diphosphatase n=13 Tax=Bifidobacterium RepID=UPPP_BIFLD
undecaprenyl-diphosphatase
L2_021_251G1_scaffold_71_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27060..27851
DNA (792bp) protein (264aa)
Fructosamine-3-kinase n=10 Tax=Bifidobacterium RepID=B3DRX2_BIFLD
fructosamine-3-kinase
Fructosamine kinase {ECO:0000313|EMBL:AIW43801.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_251G1_scaffold_71_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27897..29042)
DNA (1146bp) protein (382aa)
Chaperone protein DnaJ n=9 Tax=Bifidobacterium RepID=DNAJ_BIFLO
chaperone protein
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L2_021_251G1_scaffold_71_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29098..30216)
DNA (1119bp) protein (373aa)
Heat-inducible transcription repressor HrcA n=9 Tax=Bifidobacterium RepID=HRCA_BIFLD
hrcA; hrca
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L2_021_251G1_scaffold_71_29
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30591..32699
DNA (2109bp) protein (703aa)
Transketolase n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MZC2_9BIFI
Transketolase {ECO:0000313|EMBL:CCY94994.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
transketolase
L2_021_251G1_scaffold_71_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32819..33922
DNA (1104bp) protein (368aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
Transaldolase n=4 Tax=Bifidobacterium longum RepID=E8MJ10_BIFL2
transaldolase
Displaying items 1-30 of 89 in total

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