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L2_021_251G1_scaffold_126

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_251G1_scaffold_126_1
Bifidobacterium saguini, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..611
DNA (609bp) protein (203aa)
Cys/Met metabolism PLP-dependent enzyme {ECO:0000313|EMBL:KFI94182.1}; EC=2.5.1.49 {ECO:0000313|EMBL:KFI94182.1};; TaxID=1437607 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saguini DSM 23967.;"
Cys/Met metabolism PLP-dependent enzyme n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XVR5_9BIFI
O-acetylhomoserine aminocarboxypropyltransferase
L2_021_251G1_scaffold_126_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

772..1671
DNA (900bp) protein (300aa)
Membrane protease-like protein n=15 Tax=Bifidobacterium RepID=B3DQ49_BIFLD
hypothetical protein
Membrane protease-like protein {ECO:0000313|EMBL:ACD97548.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_021_251G1_scaffold_126_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1738..2583)
DNA (846bp) protein (282aa)
Patatin-like phospholipase n=3 Tax=Bifidobacterium RepID=E5XVP7_9BIFI
phospholipase
Phospholipase {ECO:0000313|EMBL:AIW44021.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_251G1_scaffold_126_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2712..3506)
DNA (795bp) protein (265aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
Glutamate racemase n=15 Tax=Bifidobacterium RepID=MURI_BIFLD
murI; glutamate racemase
L2_021_251G1_scaffold_126_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3614..4507
DNA (894bp) protein (298aa)
Diaminopimelate epimerase {ECO:0000256|SAAS:SAAS00028055}; EC=5.1.1.7 {ECO:0000256|SAAS:SAAS00028063};; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Diaminopimelate epimerase n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AWI0_BIFLN
diaminopimelate epimerase
L2_021_251G1_scaffold_126_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4513..5130)
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MUU8_BIFL1
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ71542.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_021_251G1_scaffold_126_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5132..5380
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:BAP83936.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L2_021_251G1_scaffold_126_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5388..6281
DNA (894bp) protein (298aa)
PHP domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B607_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI97140.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_021_251G1_scaffold_126_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6342..6566)
DNA (225bp) protein (75aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=B3DQ55_BIFLD
Protein of unknown function (DUF3107).
Putative ATP-binding protein {ECO:0000313|EMBL:CCK35314.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L2_021_251G1_scaffold_126_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6715..8370)
DNA (1656bp) protein (552aa)
Phosphotransferase enzyme domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B610_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:AEI97142.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
hypothetical protein
L2_021_251G1_scaffold_126_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8516..10090
DNA (1575bp) protein (525aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
DNA helicase n=2 Tax=Bifidobacterium longum subsp. longum RepID=F8AUD2_BIFLN
DNA helicase
L2_021_251G1_scaffold_126_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10160..11905)
DNA (1746bp) protein (582aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8AUD3_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:AEI97144.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
hypothetical protein
L2_021_251G1_scaffold_126_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12126..13007
DNA (882bp) protein (294aa)
Predicted secreted protein containing a PDZ domain n=4 Tax=Bifidobacterium RepID=D6DB96_BIFLN
Predicted secreted protein containing a PDZ domain
Hypothetical secreted protein {ECO:0000313|EMBL:ACD97558.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_021_251G1_scaffold_126_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13123..13539
DNA (417bp) protein (139aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=B3DQ60_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44012.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_251G1_scaffold_126_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14008..15711
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQ01_BIFLS
DivIVA domain repeat protein {ECO:0000313|EMBL:KFI68539.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_021_251G1_scaffold_126_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15708..16898
DNA (1191bp) protein (397aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZVB2_BIFLJ
1-deoxy-D-xylulose 5-phosphate reductoisomerase
L2_021_251G1_scaffold_126_17
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16895..18118
DNA (1224bp) protein (408aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=12 Tax=Bifidobacterium RepID=D6DB93_BIFLN
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
L2_021_251G1_scaffold_126_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18239..19951
DNA (1713bp) protein (571aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=C5EE11_BIFLI
Hydrolases of the alpha/beta superfamily {ECO:0000313|EMBL:CCK35304.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
esterase/lipase
L2_021_251G1_scaffold_126_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20001..20720
DNA (720bp) protein (240aa)
DNA repair protein RecO n=5 Tax=Bifidobacterium RepID=E8ME86_BIFL2
DNA repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_021_251G1_scaffold_126_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20717..21511
DNA (795bp) protein (265aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Isoprenyl transferase n=16 Tax=Bacteria RepID=ISPT_BIFLO
uppS; undecaprenyl pyrophosphate synthase
L2_021_251G1_scaffold_126_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21667..22869)
DNA (1203bp) protein (401aa)
Possible inosine-uridine preferring nucleoside hydrolase n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G7Y2_BIFLO
inosine-uridine preferring nucleoside hydrolase
Possible inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:AAN23967.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_021_251G1_scaffold_126_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22993..24063)
DNA (1071bp) protein (357aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components n=11 Tax=Bacteria RepID=D6DB87_BIFLN
ABC transporter substrate-binding protein
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components {ECO:0000313|EMBL:CBK69758.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L2_021_251G1_scaffold_126_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24324..25106)
DNA (783bp) protein (261aa)
ABC-type nitrate/sulfonate/bicarbonate transport system permease component n=6 Tax=Bifidobacterium RepID=B3DQ69_BIFLD
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:KEY21763.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_021_251G1_scaffold_126_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25302..26858)
DNA (1557bp) protein (519aa)
Glycosyl hydrolases 32 C terminal family protein {ECO:0000313|EMBL:CCK35297.1}; EC=2.4.1.243 {ECO:0000313|EMBL:CCK35297.1};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
beta-fructofuranosidase (EC:3.2.1.26)
Glycosyl hydrolases 32 C terminal family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I1Z3_BIFLN
L2_021_251G1_scaffold_126_25

Not on your lists

comp(26869..28206)
DNA (1338bp) protein (446aa)
Sucrose transport protein n=1 Tax=uncultured bacterium RepID=S6CPP2_9BACT
Sucrose transport protein {ECO:0000313|EMBL:CCG34807.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
galactoside transport protein
L2_021_251G1_scaffold_126_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28420..29460)
DNA (1041bp) protein (347aa)
Probable LacI-type transcriptional regulator n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G7X8_BIFLO
LacI family transcriptional regulator {ECO:0000313|EMBL:KEY21766.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
LacI-type transcriptional regulator
L2_021_251G1_scaffold_126_27
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29504..30901)
DNA (1398bp) protein (466aa)
Serine protease inhibitor n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MUH4_9BIFI
Serine protease inhibitor {ECO:0000313|EMBL:CCY95078.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
serine protease inhibitor
L2_021_251G1_scaffold_126_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30959..31369)
DNA (411bp) protein (137aa)
Uncharacterized protein n=12 Tax=Bacteria RepID=B3DQ74_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY31223.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_021_251G1_scaffold_126_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31516..31632
DNA (117bp) protein (39aa)
Uncharacterized protein n=10 Tax=Bifidobacterium RepID=B3DQ75_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD97574.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_021_251G1_scaffold_126_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31998..33377)
DNA (1380bp) protein (460aa)
Transporter, major facilitator family protein n=1 Tax=Bifidobacterium longum subsp. longum 1-6B RepID=I3B620_BIFLN
transport protein
MFS transporter permease {ECO:0000313|EMBL:KEY21769.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Displaying items 1-30 of 53 in total

View Taxonomy