ggKbase home page

L2_021_251G1_scaffold_139

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_251G1_scaffold_139_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..1068
DNA (1068bp) protein (356aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Argininosuccinate lyase n=2 Tax=Bifidobacterium longum subsp. longum RepID=D6ZTB2_BIFLJ
argininosuccinate lyase
L2_021_251G1_scaffold_139_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1417..1611
DNA (195bp) protein (65aa)
Sulfur transfer protein for thiamine biosynthesis n=20 Tax=Bifidobacterium RepID=B3DSY5_BIFLD
hypothetical protein
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:ACJ52947.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_021_251G1_scaffold_139_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1623..2492
DNA (870bp) protein (290aa)
Thiazole synthase n=3 Tax=Bifidobacterium longum RepID=B7GTN7_BIFLS
thiazole synthase
Thiazole biosynthesis family protein {ECO:0000313|EMBL:ACJ52946.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_021_251G1_scaffold_139_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2569..3378
DNA (810bp) protein (270aa)
Thiazole biosynthesis adenylyltransferase ThiF n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTB5_BIFLJ
thiazole biosynthesis adenylyltransferase ThiF
Thiazole biosynthesis adenylyltransferase ThiF {ECO:0000313|EMBL:ADH00121.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_021_251G1_scaffold_139_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3435..3791
DNA (357bp) protein (119aa)
Rhodanese domain-containing protein {ECO:0000313|EMBL:KFI69713.1}; EC=2.8.1.1 {ECO:0000313|EMBL:KFI69713.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Rhodanese domain protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GTN5_BIFLS
hypothetical protein
L2_021_251G1_scaffold_139_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3953..4486
DNA (534bp) protein (178aa)
Uncharacterized protein n=13 Tax=Bifidobacterium RepID=Q8G5F9_BIFLO
hypothetical protein
HD domain protein {ECO:0000313|EMBL:EEI81073.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_021_251G1_scaffold_139_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4483..5250
DNA (768bp) protein (256aa)
Predicted membrane protein n=11 Tax=Bifidobacterium longum RepID=D6D9C0_BIFLN
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KEY32585.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_021_251G1_scaffold_139_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5376..6698
DNA (1323bp) protein (441aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Tyrosine--tRNA ligase n=16 Tax=Bifidobacterium RepID=SYY_BIFLD
tyrS; tyrs
L2_021_251G1_scaffold_139_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


6726..8528
DNA (1803bp) protein (601aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ARH9_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:AEI97862.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
hypothetical protein
L2_021_251G1_scaffold_139_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8537..9577
DNA (1041bp) protein (347aa)
Predicted sugar phosphatases of the HAD superfamily n=16 Tax=Bifidobacterium RepID=D6D9B7_BIFLN
hypothetical protein
HAD family hydrolase {ECO:0000313|EMBL:AIW43542.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_251G1_scaffold_139_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9582..9728
DNA (147bp) protein (49aa)
Uncharacterized protein n=16 Tax=Bifidobacterium RepID=B3DSX6_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ32166.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_021_251G1_scaffold_139_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9834..10607
DNA (774bp) protein (258aa)
Hemolysin-like protein with S4 domain found in bacteria and plants n=16 Tax=Bifidobacterium RepID=Q8G5G4_BIFLO
hypothetical protein
Cell division protein FtsJ {ECO:0000313|EMBL:KEY21861.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_021_251G1_scaffold_139_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10589..11263)
DNA (675bp) protein (225aa)
Uncharacterized protein n=15 Tax=Bifidobacterium RepID=B3DSX4_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD98243.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_021_251G1_scaffold_139_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11401..12063)
DNA (663bp) protein (221aa)
TrkA n=12 Tax=Bifidobacterium RepID=E4QZJ4_BIFLM
trkA; trka
Potassium transporter {ECO:0000313|EMBL:AIW44633.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_251G1_scaffold_139_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12114..13580)
DNA (1467bp) protein (489aa)
Trk-type K+ transport systems membrane component n=13 Tax=Bifidobacterium RepID=B3DSX2_BIFLD
cation transport protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24851.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_021_251G1_scaffold_139_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13827..14849
DNA (1023bp) protein (341aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=2 Tax=Bifidobacterium longum RepID=E8MHJ6_BIFL2
kinase
L2_021_251G1_scaffold_139_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14849..16675
DNA (1827bp) protein (609aa)
ATPase for DNA repair n=4 Tax=Bifidobacterium RepID=B3DSX0_BIFLD
DNA recombination protein RecN {ECO:0000313|EMBL:KEY32594.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
recN; DNA repair ATPase
L2_021_251G1_scaffold_139_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16705..17352
DNA (648bp) protein (216aa)
PgmB1 n=4 Tax=Bifidobacterium longum RepID=E4QZJ0_BIFLM
pgmB1; pgmb1
Beta-phosphoglucomutase {ECO:0000313|EMBL:KEY32595.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_021_251G1_scaffold_139_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17593..17967
DNA (375bp) protein (125aa)
Transcriptional regulator, GntR family n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GUD3_BIFLN
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEI81060.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Transcriptional regulator, GntR family
L2_021_251G1_scaffold_139_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17989..18909
DNA (921bp) protein (307aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GUD2_BIFLN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEI81059.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
ABC transporter ATP-binding protein
L2_021_251G1_scaffold_139_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18916..19629
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E7S8_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ54072.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
putative membrane spanning protein
L2_021_251G1_scaffold_139_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19632..20345
DNA (714bp) protein (238aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C2GUD0_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EEI81057.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
hypothetical protein
L2_021_251G1_scaffold_139_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20421..23207)
DNA (2787bp) protein (929aa)
PacL2 n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G5H5_BIFLO
cation-transporting ATPase
Cation-transporting ATPase {ECO:0000313|EMBL:AIW44634.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_021_251G1_scaffold_139_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23727..25217)
DNA (1491bp) protein (497aa)
Threonine synthase {ECO:0000313|EMBL:EEQ54068.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EEQ54068.1};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Threonine synthase n=6 Tax=Bifidobacterium RepID=E8MSK1_BIFL1
threonine synthase
L2_021_251G1_scaffold_139_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25440..26141
DNA (702bp) protein (234aa)
Serine hydroxymethyltransferase 1 {ECO:0000313|EMBL:CCK34624.1}; EC=2.1.2.1 {ECO:0000313|EMBL:CCK34624.1};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Glycine hydroxymethyltransferase n=3 Tax=Bifidobacterium RepID=E5XWB6_9BIFI
glyA; serine hydroxymethyltransferase
L2_021_251G1_scaffold_139_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26263..27558
DNA (1296bp) protein (432aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Gamma-glutamyl phosphate reductase n=2 Tax=Bifidobacterium longum RepID=E8MHK6_BIFL2
gamma-glutamyl phosphate reductase
L2_021_251G1_scaffold_139_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27555..28136
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DSW0_BIFLD
hypothetical protein
Phosphoribosylglycinamide synthetase {ECO:0000313|EMBL:KEY21876.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_021_251G1_scaffold_139_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28133..28918
DNA (786bp) protein (262aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Probable nicotinate-nucleotide adenylyltransferase n=11 Tax=Bifidobacterium longum RepID=B3DSV9_BIFLD
madD; madd
L2_021_251G1_scaffold_139_29
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29016..30218)
DNA (1203bp) protein (401aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Beta-hexosaminidase n=5 Tax=Bifidobacterium RepID=F8ARF8_BIFLN
beta-hexosaminidase
L2_021_251G1_scaffold_139_30
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30391..33630
DNA (3240bp) protein (1080aa)
UPF0182 protein HMPREF0175_0618 n=4 Tax=Bifidobacterium RepID=C2GUC1_BIFLN
UPF0182 protein BN755_01323 {ECO:0000256|HAMAP-Rule:MF_01600}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
norM2; norm2
Displaying items 1-30 of 34 in total

View Taxonomy