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L2_021_251G1_scaffold_145

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_251G1_scaffold_145_1
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1101)
DNA (1101bp) protein (367aa)
IS66 family element, transposase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NII3_CLOSV
IS66 family element, transposase {ECO:0000313|EMBL:EDS05646.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Transposase and inactivated derivatives
L2_021_251G1_scaffold_145_2
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1252..1596)
DNA (345bp) protein (115aa)
Uncharacterized protein n=8 Tax=root RepID=R5TWP2_9FIRM
Element, Orf2 protein, IS66 family {ECO:0000313|EMBL:ERI95281.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
transposase
L2_021_251G1_scaffold_145_3
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2078..2338
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TM07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66735.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Helix-turn-helix.
L2_021_251G1_scaffold_145_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2535..4082)
DNA (1548bp) protein (516aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=4 Tax=Clostridiales RepID=A7B1E4_RUMGN
L2_021_251G1_scaffold_145_5
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4208..5431)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TLX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66733.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_021_251G1_scaffold_145_6
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5424..5894)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UCS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66732.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
RNA polymerase sigma factor
L2_021_251G1_scaffold_145_7
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6122..6352)
DNA (231bp) protein (77aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B1E0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43620.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
PTS HPr component phosphorylation site.
L2_021_251G1_scaffold_145_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6474..8000)
DNA (1527bp) protein (509aa)
Response regulator receiver domain protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TM04_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CCZ66730.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
AraC family transcriptional regulator
L2_021_251G1_scaffold_145_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7988..9706)
DNA (1719bp) protein (573aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BS16_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43622.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
integral membrane sensor signal transduction histidine kinase
L2_021_251G1_scaffold_145_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9861..11504)
DNA (1644bp) protein (548aa)
Prophage LambdaSa04 site-specific recombinase resolvase family n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TLX1_9FIRM
Prophage LambdaSa04 site-specific recombinase resolvase family {ECO:0000313|EMBL:CCZ66728.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_021_251G1_scaffold_145_11
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11641..11940)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UCS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66727.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_021_251G1_scaffold_145_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11955..13694)
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B1T7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78209.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_021_251G1_scaffold_145_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14091..15026
DNA (936bp) protein (312aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TM01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN46397.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_021_251G1_scaffold_145_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15013..16065
DNA (1053bp) protein (351aa)
Histidine kinase A domain protein n=4 Tax=Clostridiales RepID=A7B1T4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46398.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
two-component sensor histidine kinase
L2_021_251G1_scaffold_145_15
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16151..16483
DNA (333bp) protein (111aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TLW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66723.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_021_251G1_scaffold_145_16
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16633..17718
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UCR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66722.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
alcohol dehydrogenase
L2_021_251G1_scaffold_145_17
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17705..18646
DNA (942bp) protein (314aa)
NAD-dependent aldehyde dehydrogenases (EC:1.2.1.3 1.2.1.5)
Aldehyde dehydrogenase (NAD) family protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U6E3_9FIRM
Aldehyde dehydrogenase (NAD) family protein {ECO:0000313|EMBL:CCZ66721.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_021_251G1_scaffold_145_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18627..19865)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B1S9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78201.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_021_251G1_scaffold_145_19
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19983..21623)
DNA (1641bp) protein (547aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Hydroxylamine reductase n=3 Tax=Lachnospiraceae RepID=A7B1S8_RUMGN
hybrid cluster protein
L2_021_251G1_scaffold_145_20
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21927..22259)
DNA (333bp) protein (111aa)
Cupin domain protein n=2 Tax=Lachnospiraceae RepID=A7B1S6_RUMGN
Cupin 2 domain-containing protein {ECO:0000313|EMBL:CCZ66718.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Uncharacterized conserved protein, contains double-stranded beta-helix domain
L2_021_251G1_scaffold_145_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22273..22983)
DNA (711bp) protein (237aa)
4Fe-4S binding domain protein n=4 Tax=Lachnospiraceae RepID=A7B1S5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17864.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L2_021_251G1_scaffold_145_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23075..23722
DNA (648bp) protein (216aa)
Cyclic nucleotide-binding domain protein n=4 Tax=Clostridiales RepID=A7B1S4_RUMGN
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EDN78196.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
CarD family transcriptional regulator
L2_021_251G1_scaffold_145_23
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24019..24510)
DNA (492bp) protein (164aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2XUJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD56018.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L2_021_251G1_scaffold_145_24
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24853..25281
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TLZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66715.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_021_251G1_scaffold_145_25
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25859..26641
DNA (783bp) protein (261aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TTW2_9FIRM
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:CCZ66714.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_021_251G1_scaffold_145_26
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26821..27027)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TLV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66713.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_021_251G1_scaffold_145_27
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27076..27384)
DNA (309bp) protein (103aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UCQ9_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCZ66712.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Helix-turn-helix.
L2_021_251G1_scaffold_145_28
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27625..28242
DNA (618bp) protein (206aa)
Integrase family protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U6D3_9FIRM
Integrase family protein {ECO:0000313|EMBL:CCZ66711.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
integrase family protein
L2_021_251G1_scaffold_145_29
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28272..28703
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IFP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS20754.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
pathogenesis-like protein
L2_021_251G1_scaffold_145_30
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29582..30475)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TTV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66709.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
Displaying items 1-30 of 38 in total

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